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A

AbstractGbifUser - Class in org.gbif.api.model.common
An abstract GBIF user account.
AbstractGbifUser() - Constructor for class org.gbif.api.model.common.AbstractGbifUser
 
acceptFormatter(TemporalCoverageFormatterVisitor) - Method in class org.gbif.api.model.registry.eml.temporal.DateRange
 
acceptFormatter(TemporalCoverageFormatterVisitor) - Method in class org.gbif.api.model.registry.eml.temporal.SingleDate
 
acceptFormatter(TemporalCoverageFormatterVisitor) - Method in class org.gbif.api.model.registry.eml.temporal.TemporalCoverage
Accept a TemporalCoverageFormatterVisitor for formatting purpose.
acceptFormatter(TemporalCoverageFormatterVisitor) - Method in class org.gbif.api.model.registry.eml.temporal.VerbatimTimePeriod
 
accessionStatus(AccessionStatus) - Method in class org.gbif.api.model.collections.request.CollectionSearchRequest.Builder
 
AccessionStatus - Enum in org.gbif.api.vocabulary.collections
Describe how a collection is added or joined to an institution.
AcefTerm - Enum in org.gbif.dwc.terms
As per CoL Data Submission Format, ver.
AcTerm - Enum in org.gbif.dwc.terms
All Audiovisual Core terms with namespace http://rs.tdwg.org/ac/terms/.
active(boolean) - Method in class org.gbif.api.model.collections.request.CollectionSearchRequest.Builder
 
active(boolean) - Method in class org.gbif.api.model.collections.request.InstitutionSearchRequest.Builder
 
addAddress(String) - Method in class org.gbif.api.model.registry.Contact
 
addBasisOfRecordFilter(BasisOfRecord) - Method in class org.gbif.api.model.occurrence.search.OccurrenceSearchRequest
 
addCatalogNumberFilter(String) - Method in class org.gbif.api.model.occurrence.search.OccurrenceSearchRequest
 
addChecklistFilter(UUID) - Method in class org.gbif.api.model.checklistbank.search.NameUsageSearchRequest
 
addClassKeyFilter(int) - Method in class org.gbif.api.model.occurrence.search.OccurrenceSearchRequest
 
addCollectionKeyFilter(String) - Method in class org.gbif.api.model.occurrence.search.OccurrenceSearchRequest
 
addComment(UUID, Comment) - Method in interface org.gbif.api.service.registry.CommentService
Add a new Comment to a target entity.
addConstituent(UUID, UUID) - Method in interface org.gbif.api.service.registry.NetworkService
Adds an existing dataset to the list of constituents of a network.
addContact(Contact) - Method in class org.gbif.api.model.registry.eml.Project
Add contact to Contact List.
addContact(UUID, Contact) - Method in interface org.gbif.api.service.registry.ContactService
Add a new Contact to a target entity.
addContactPerson(UUID, Contact) - Method in interface org.gbif.api.service.collections.ContactService
Adds a Contact contact to an entity.
addContinentFilter(Continent) - Method in class org.gbif.api.model.occurrence.search.OccurrenceSearchRequest
 
addContinentFilter(Continent) - Method in class org.gbif.api.model.registry.search.DatasetSearchRequest
Filters dataset by a continent of the geospatial coverage.
addCoordinateUncertaintyInMetersFilter(double) - Method in class org.gbif.api.model.occurrence.search.OccurrenceSearchRequest
 
addCountryFilter(Country) - Method in class org.gbif.api.model.occurrence.search.OccurrenceSearchRequest
 
addCountryFilter(Country) - Method in class org.gbif.api.model.registry.search.DatasetSearchRequest
Filters dataset by a country of the geospatial coverage.
addCoverages(TaxonomicCoverage) - Method in class org.gbif.api.model.registry.eml.TaxonomicCoverages
 
addCuratorialUnitComposite(CuratorialUnitComposite) - Method in class org.gbif.api.model.registry.eml.Collection
Adds a CuratorialUnitComposite to the Collection's list of CuratorialUnitComposit.
addDatasetKeyFilter(UUID) - Method in class org.gbif.api.model.occurrence.search.OccurrenceSearchRequest
 
addDecadeFilter(int) - Method in class org.gbif.api.model.registry.search.DatasetSearchRequest
Filters datasets by their temporal coverage broken down to decades.
addDecimalLatitudeFilter(double) - Method in class org.gbif.api.model.occurrence.search.OccurrenceSearchRequest
 
addDecimalLongitudeFilter(double) - Method in class org.gbif.api.model.occurrence.search.OccurrenceSearchRequest
 
addDescription(int, Language, String) - Method in class org.gbif.api.model.checklistbank.TableOfContents
 
addDeviation(String) - Method in class org.gbif.api.model.registry.eml.curatorial.CuratorialUnitComposite
 
addElevationFilter(double) - Method in class org.gbif.api.model.occurrence.search.OccurrenceSearchRequest
 
addEmail(String) - Method in class org.gbif.api.model.registry.Contact
 
addEndpoint(Endpoint) - Method in class org.gbif.api.model.registry.Dataset
 
addEndpoint(Endpoint) - Method in interface org.gbif.api.model.registry.Endpointable
 
addEndpoint(Endpoint) - Method in class org.gbif.api.model.registry.Installation
 
addEndpoint(Endpoint) - Method in class org.gbif.api.model.registry.Network
 
addEndpoint(Endpoint) - Method in class org.gbif.api.model.registry.Node
 
addEndpoint(Endpoint) - Method in class org.gbif.api.model.registry.Organization
 
addEndpoint(UUID, Endpoint) - Method in interface org.gbif.api.service.registry.EndpointService
Add a new Endpoint to a target entity.
addEstablishmentMeansFilter(EstablishmentMeans) - Method in class org.gbif.api.model.occurrence.search.OccurrenceSearchRequest
 
addEventDateFilter(IsoDateInterval) - Method in class org.gbif.api.model.occurrence.search.OccurrenceSearchRequest
 
addExecution(PipelineExecution) - Method in class org.gbif.api.model.pipelines.PipelineProcess
 
addExtinctFilter(boolean) - Method in class org.gbif.api.model.checklistbank.search.NameUsageSearchRequest
 
addFacetPage(P, int, int) - Method in class org.gbif.api.model.common.search.FacetedSearchRequest
Sets the paging setting of facet parameter.
addFacets(P...) - Method in class org.gbif.api.model.common.search.FacetedSearchRequest
 
addFamilyKeyFilter(int) - Method in class org.gbif.api.model.occurrence.search.OccurrenceSearchRequest
 
addGadmGidFilter(String) - Method in class org.gbif.api.model.occurrence.search.OccurrenceSearchRequest
 
addGadmLevel0GidFilter(String) - Method in class org.gbif.api.model.occurrence.search.OccurrenceSearchRequest
 
addGadmLevel1GidFilter(String) - Method in class org.gbif.api.model.occurrence.search.OccurrenceSearchRequest
 
addGadmLevel2GidFilter(String) - Method in class org.gbif.api.model.occurrence.search.OccurrenceSearchRequest
 
addGadmLevel3GidFilter(String) - Method in class org.gbif.api.model.occurrence.search.OccurrenceSearchRequest
 
addGenusKeyFilter(int) - Method in class org.gbif.api.model.occurrence.search.OccurrenceSearchRequest
 
addGeometryFilter(String) - Method in class org.gbif.api.model.occurrence.search.OccurrenceSearchRequest
 
addHabitatFilter(Habitat) - Method in class org.gbif.api.model.checklistbank.search.NameUsageSearchRequest
 
addHasCoordinateFilter(boolean) - Method in class org.gbif.api.model.occurrence.search.OccurrenceSearchRequest
 
addHigherTaxonFilter(int) - Method in class org.gbif.api.model.checklistbank.search.NameUsageSearchRequest
 
addHomepage(URI) - Method in class org.gbif.api.model.registry.Contact
 
addHostingOrgFilter(UUID) - Method in class org.gbif.api.model.registry.search.DatasetSearchRequest
 
addIdentifiedByFilter(String) - Method in class org.gbif.api.model.occurrence.search.OccurrenceSearchRequest
 
addIdentifiedByIdsFilter(String) - Method in class org.gbif.api.model.occurrence.search.OccurrenceSearchRequest
 
addIdentifier(UUID, Identifier) - Method in interface org.gbif.api.service.registry.IdentifierService
Add a new Identifier to a target entity.
addInstitutionCodeFilter(String) - Method in class org.gbif.api.model.occurrence.search.OccurrenceSearchRequest
 
addInstitutionKeyFilter(String) - Method in class org.gbif.api.model.occurrence.search.OccurrenceSearchRequest
 
addIssue(NameUsageIssue) - Method in class org.gbif.api.model.checklistbank.NameUsage
 
addIssue(OccurrenceIssue) - Method in class org.gbif.api.model.occurrence.Occurrence
 
addIssueFilter(NameUsageIssue) - Method in class org.gbif.api.model.checklistbank.search.NameUsageSearchRequest
 
addIssueFilter(OccurrenceIssue) - Method in class org.gbif.api.model.occurrence.search.OccurrenceSearchRequest
 
addKeyword(String) - Method in class org.gbif.api.model.registry.eml.KeywordCollection
Add keyword to keywords Set.
addKeywordFilter(String) - Method in class org.gbif.api.model.registry.search.DatasetSearchRequest
Filters datasets by a keyword given in EML or as simple, public tags.
addKeywordFilter(Tag) - Method in class org.gbif.api.model.registry.search.DatasetSearchRequest
Filters dataset by a tag.
addKingdomKeyFilter(int) - Method in class org.gbif.api.model.occurrence.search.OccurrenceSearchRequest
 
addLastInterpretedFilter(Date) - Method in class org.gbif.api.model.occurrence.search.OccurrenceSearchRequest
 
addMachineTag(MachineTag) - Method in class org.gbif.api.model.collections.Collection
 
addMachineTag(MachineTag) - Method in class org.gbif.api.model.collections.Institution
 
addMachineTag(MachineTag) - Method in class org.gbif.api.model.registry.Dataset
 
addMachineTag(MachineTag) - Method in class org.gbif.api.model.registry.Endpoint
 
addMachineTag(MachineTag) - Method in class org.gbif.api.model.registry.Installation
 
addMachineTag(MachineTag) - Method in interface org.gbif.api.model.registry.MachineTaggable
 
addMachineTag(MachineTag) - Method in class org.gbif.api.model.registry.Network
 
addMachineTag(MachineTag) - Method in class org.gbif.api.model.registry.Node
 
addMachineTag(MachineTag) - Method in class org.gbif.api.model.registry.Organization
 
addMachineTag(UUID, MachineTag) - Method in interface org.gbif.api.service.registry.MachineTagService
Add a new MachineTag to a target entity.
addMachineTag(UUID, TagName, String) - Method in interface org.gbif.api.service.registry.MachineTagService
Add a new MachineTag to a target entity.
addMachineTag(UUID, String, String, String) - Method in interface org.gbif.api.service.registry.MachineTagService
Add a new MachineTag to a target entity.
addMasterSourceMetadata(UUID, MasterSourceMetadata) - Method in interface org.gbif.api.service.collections.CollectionEntityService
Adds MasterSourceMetadata to an entity.
addMediaTypeFilter(MediaType) - Method in class org.gbif.api.model.occurrence.search.OccurrenceSearchRequest
 
addMethodStep(String) - Method in class org.gbif.api.model.registry.eml.SamplingDescription
 
addMetricInfo(PipelineStep.MetricInfo) - Method in class org.gbif.api.model.pipelines.PipelineStep
 
addMonthFilter(int) - Method in class org.gbif.api.model.occurrence.search.OccurrenceSearchRequest
 
addOccurrenceIDFilter(String) - Method in class org.gbif.api.model.occurrence.search.OccurrenceSearchRequest
 
addOccurrenceMapping(UUID, OccurrenceMapping) - Method in interface org.gbif.api.service.collections.OccurrenceMappingService
Add a new OccurrenceMapping to a target entity.
addOccurrenceStatusFilter(OccurrenceStatus) - Method in class org.gbif.api.model.occurrence.search.OccurrenceSearchRequest
 
addOffset(long) - Method in class org.gbif.api.model.common.paging.PageableBase
Adds to existing offset, setting offset to zero if it would be negative.
addOrderKeyFilter(int) - Method in class org.gbif.api.model.occurrence.search.OccurrenceSearchRequest
 
addOriginFilter(Origin) - Method in class org.gbif.api.model.checklistbank.search.NameUsageSearchRequest
 
addParameter(P, Iterable<String>) - Method in class org.gbif.api.model.common.search.SearchRequest
Adds the specified parameter.
addParameter(P, String...) - Method in class org.gbif.api.model.common.search.SearchRequest
Adds the specified parameter.
addParameter(P, String) - Method in class org.gbif.api.model.common.search.SearchRequest
Adds the specified parameter.
addParameter(P, long) - Method in class org.gbif.api.model.common.search.SearchRequest
Adds the specified long parameter.
addParameter(P, int) - Method in class org.gbif.api.model.common.search.SearchRequest
Adds the specified int parameter.
addParameter(P, double) - Method in class org.gbif.api.model.common.search.SearchRequest
Adds the specified double parameter.
addParameter(P, boolean) - Method in class org.gbif.api.model.common.search.SearchRequest
Adds the specified boolean parameter.
addParameter(P, Enum<?>) - Method in class org.gbif.api.model.common.search.SearchRequest
Adds the specified parameter.
addParameter(P, Date) - Method in class org.gbif.api.model.common.search.SearchRequest
Adds the specified date parameter as an ISO date.
addParameter(P, IsoDateInterval) - Method in class org.gbif.api.model.common.search.SearchRequest
Adds the specified date parameter as an ISO date interval.
addPhone(String) - Method in class org.gbif.api.model.registry.Contact
 
addPhylumKeyFilter(int) - Method in class org.gbif.api.model.occurrence.search.OccurrenceSearchRequest
 
addPipelineExecution(long, PipelineExecution) - Method in interface org.gbif.api.service.pipelines.PipelinesHistoryService
Adds/persists the information of a pipeline execution.
addPoint(Point) - Method in class org.gbif.api.model.registry.eml.geospatial.Polygon
 
addPosition(String) - Method in class org.gbif.api.model.registry.Contact
 
addProjectIdentifier(String) - Method in class org.gbif.api.model.registry.search.DatasetSearchRequest
 
addPublishingCountryFilter(Country) - Method in class org.gbif.api.model.occurrence.search.OccurrenceSearchRequest
 
addPublishingCountryFilter(Country) - Method in class org.gbif.api.model.registry.search.DatasetSearchRequest
Filters dataset by the owning organizations country.
addPublishingOrgFilter(UUID) - Method in class org.gbif.api.model.registry.search.DatasetSearchRequest
 
addRankFilter(Rank) - Method in class org.gbif.api.model.checklistbank.search.NameUsageSearchRequest
 
addReason(Match.Reason) - Method in class org.gbif.api.model.collections.lookup.Match
 
addRecordedByFilter(String) - Method in class org.gbif.api.model.occurrence.search.OccurrenceSearchRequest
 
addRecordedByIdsFilter(String) - Method in class org.gbif.api.model.occurrence.search.OccurrenceSearchRequest
 
addRecordNumberFilter(String) - Method in class org.gbif.api.model.occurrence.search.OccurrenceSearchRequest
 
Address - Class in org.gbif.api.model.collections
The particulars of the place where a institution of collection is situated.
Address() - Constructor for class org.gbif.api.model.collections.Address
 
Address - Interface in org.gbif.api.model.registry
A package visible providing the commonality for addresses, including the constraint validations.
addRole(UserRole) - Method in class org.gbif.api.model.common.AbstractGbifUser
 
addRole(UserRole) - Method in class org.gbif.api.model.common.User
Deprecated.
 
addSpatialIssueFilter(boolean) - Method in class org.gbif.api.model.occurrence.search.OccurrenceSearchRequest
 
addSpeciesKeyFilter(int) - Method in class org.gbif.api.model.occurrence.search.OccurrenceSearchRequest
 
addStep(PipelineStep) - Method in class org.gbif.api.model.pipelines.PipelineExecution
 
addStep(StepType) - Method in class org.gbif.api.model.pipelines.RunPipelineResponse.Builder
 
addStepFailed(StepType) - Method in class org.gbif.api.model.pipelines.RunPipelineResponse.Builder
 
addSubGenusKeyFilter(int) - Method in class org.gbif.api.model.occurrence.search.OccurrenceSearchRequest
 
addSubTypeFilter(DatasetSubtype) - Method in class org.gbif.api.model.registry.search.DatasetSearchRequest
 
addTag(UUID, String) - Method in interface org.gbif.api.service.registry.TagService
Add a new Tag to a target entity.
addTag(UUID, Tag) - Method in interface org.gbif.api.service.registry.TagService
Add a new Tag to a target entity.
addTaxonKey(int) - Method in class org.gbif.api.model.registry.search.DatasetSearchRequest
 
addTaxonKeyFilter(int) - Method in class org.gbif.api.model.occurrence.search.OccurrenceSearchRequest
 
addTaxonomicStatusFilter(TaxonomicStatus) - Method in class org.gbif.api.model.checklistbank.search.NameUsageSearchRequest
 
addTaxonomicStatusFilter(NomenclaturalStatus) - Method in class org.gbif.api.model.checklistbank.search.NameUsageSearchRequest
 
addThreatStatusFilter(ThreatStatus) - Method in class org.gbif.api.model.checklistbank.search.NameUsageSearchRequest
 
addTypeFilter(DatasetType) - Method in class org.gbif.api.model.registry.search.DatasetSearchRequest
 
addTypeStatusFilter(TypeStatus) - Method in class org.gbif.api.model.occurrence.search.OccurrenceSearchRequest
 
addUserId(String) - Method in class org.gbif.api.model.registry.Contact
 
addUserId(String, String) - Method in class org.gbif.api.model.registry.Contact
Adds a new user id that is assembled from a directory name and a local id within it.
addYear(int) - Method in class org.gbif.api.model.registry.search.DatasetSearchRequest
 
addYearFilter(int) - Method in class org.gbif.api.model.occurrence.search.OccurrenceSearchRequest
 
AgentIdentifier - Class in org.gbif.api.model.occurrence
 
AgentIdentifier() - Constructor for class org.gbif.api.model.occurrence.AgentIdentifier
 
AgentIdentifier(AgentIdentifierType, String) - Constructor for class org.gbif.api.model.occurrence.AgentIdentifier
 
AgentIdentifier(String) - Constructor for class org.gbif.api.model.occurrence.AgentIdentifier
 
AgentIdentifierType - Enum in org.gbif.api.vocabulary
Enumeration for user identifiers like ORCID, WIKIDATA and etc
all() - Method in interface org.gbif.api.model.pipelines.InterpretationType
 
all() - Method in enum org.gbif.api.model.pipelines.InterpretationType.RecordType
 
allowAbsentIndentifiers(UUID, int) - Method in interface org.gbif.api.service.pipelines.PipelinesHistoryService
Mark failed identifier stage as finished and continue interpretation process for datasets were identifier stage failed because of a threshold limit
allowAbsentIndentifiers(UUID) - Method in interface org.gbif.api.service.pipelines.PipelinesHistoryService
Mark latest failed identifier stage as finished and continue interpretation process for datasets were identifier stage failed because of a threshold limit
AlternativeCode - Class in org.gbif.api.model.collections
Models a GrSciColl alternative code.
AlternativeCode() - Constructor for class org.gbif.api.model.collections.AlternativeCode
 
AlternativeCode(String, String) - Constructor for class org.gbif.api.model.collections.AlternativeCode
 
alternativeCode(String) - Method in class org.gbif.api.model.collections.request.CollectionSearchRequest.Builder
 
alternativeCode(String) - Method in class org.gbif.api.model.collections.request.InstitutionSearchRequest.Builder
 
AlternativeMatches - Class in org.gbif.api.model.collections.lookup
Holds the alternative results of the collections lookup.
AlternativeMatches() - Constructor for class org.gbif.api.model.collections.lookup.AlternativeMatches
 
alternativeNames() - Method in enum org.gbif.dwc.terms.AcefTerm
 
alternativeNames() - Method in enum org.gbif.dwc.terms.AcTerm
 
AlternativeNames - Interface in org.gbif.dwc.terms
Optional interface for terms that have known alternative simple names the TermFactory should be aware of.
alternativeNames() - Method in interface org.gbif.dwc.terms.AlternativeNames
 
alternativeNames() - Method in enum org.gbif.dwc.terms.DcElement
 
alternativeNames() - Method in enum org.gbif.dwc.terms.DcTerm
 
alternativeNames() - Method in enum org.gbif.dwc.terms.DwcaTerm
 
alternativeNames() - Method in enum org.gbif.dwc.terms.DwcTerm
Array of alternative simple names in use for the term.
alternativeNames() - Method in enum org.gbif.dwc.terms.GadmTerm
 
alternativeNames() - Method in enum org.gbif.dwc.terms.GbifInternalTerm
 
alternativeNames() - Method in enum org.gbif.dwc.terms.GbifTerm
Array of alternative simple names in use for the term.
alternativeNames() - Method in enum org.gbif.dwc.terms.IucnTerm
 
alternativeNames() - Method in enum org.gbif.dwc.terms.PlaziTerm
 
alternativeNames() - Method in enum org.gbif.dwc.terms.XmpRightsTerm
 
alternativeNames() - Method in enum org.gbif.dwc.terms.XmpTerm
 
alternatives - Variable in enum org.gbif.dwc.terms.DcElement
 
alternatives - Variable in enum org.gbif.dwc.terms.DcTerm
 
AnnotationUtils - Class in org.gbif.api.util
Utility method to work with annotations.
append(Response<R>) - Method in class org.gbif.api.model.common.messaging.ResponseChain
Adds a response to the list of related response.
applyChangeSuggestion(int) - Method in interface org.gbif.api.service.collections.ChangeSuggestionService
 
ApplySuggestionResult - Class in org.gbif.api.model.collections.suggestions
Result returned by the API when a ChangeSuggestion is applied.
ApplySuggestionResult() - Constructor for class org.gbif.api.model.collections.suggestions.ApplySuggestionResult
 
AppPrincipal - Class in org.gbif.api.model.common
Similar to GbifUserPrincipal but represents an application instead of a user.
AppPrincipal(String, String) - Constructor for class org.gbif.api.model.common.AppPrincipal
AppPrincipal constructor.
AppRole - Enum in org.gbif.api.vocabulary
Role(s) that can be assigned to authenticated application.
ascii(String) - Static method in class org.gbif.api.util.UnicodeUtils
Replaces all diacretics with their ascii counterpart.
at(Dimension<Country>, Country) - Method in class org.gbif.api.model.metrics.cube.ReadBuilder
Adds an country type dimension to the address.
at(Dimension<Language>, Language) - Method in class org.gbif.api.model.metrics.cube.ReadBuilder
Adds an language type dimension to the address.
at(Dimension<? extends Enum<?>>, Enum<?>) - Method in class org.gbif.api.model.metrics.cube.ReadBuilder
Adds an enumerated type dimension to the address.
at(Dimension<Boolean>, boolean) - Method in class org.gbif.api.model.metrics.cube.ReadBuilder
Adds a boolen typed dimension to the address.
at(Dimension<Double>, double) - Method in class org.gbif.api.model.metrics.cube.ReadBuilder
Adds a double typed dimension to the address.
at(Dimension<Float>, float) - Method in class org.gbif.api.model.metrics.cube.ReadBuilder
Adds a float typed dimension to the address.
at(Dimension<Integer>, int) - Method in class org.gbif.api.model.metrics.cube.ReadBuilder
Adds an integer typed dimension to the address.
at(Dimension<String>, String) - Method in class org.gbif.api.model.metrics.cube.ReadBuilder
Adds an String typed dimension to the address.
at(Dimension<UUID>, UUID) - Method in class org.gbif.api.model.metrics.cube.ReadBuilder
Adds a UUID typed dimension to the address.
authenticate(String, String) - Method in interface org.gbif.api.service.common.IdentityAccessService
Authenticates a user.
authenticate(String, String) - Method in interface org.gbif.api.service.common.UserService
Deprecated.
Authenticates a user.
authorshipComplete() - Method in class org.gbif.api.model.checklistbank.ParsedName
 
availableExtensionResources() - Static method in enum org.gbif.api.vocabulary.Extension
 
availableExtensions() - Static method in enum org.gbif.api.vocabulary.Extension
 

B

BaseChangeSuggestion<T extends CollectionEntity> - Class in org.gbif.api.model.collections.suggestions
 
BaseChangeSuggestion() - Constructor for class org.gbif.api.model.collections.suggestions.BaseChangeSuggestion
 
BaseEntityMatched - Class in org.gbif.api.model.collections.lookup
 
BaseEntityMatched() - Constructor for class org.gbif.api.model.collections.lookup.BaseEntityMatched
 
BasePager<T> - Class in org.gbif.api.util.iterables
Iterator over registry entities from paging responses that filters out deleted entities.
BasePager(int) - Constructor for class org.gbif.api.util.iterables.BasePager
 
BASIS_OF_RECORD - Static variable in class org.gbif.api.model.metrics.cube.OccurrenceCube
 
BasisOfRecord - Enum in org.gbif.api.vocabulary
A simple enumeration of all DarwinCore values of BasisOfRecord legal for occurrences.
BasisOfRecordJsonDeserializer() - Constructor for class org.gbif.api.jackson.BasisOfRecordSerde.BasisOfRecordJsonDeserializer
 
BasisOfRecordJsonSerializer() - Constructor for class org.gbif.api.jackson.BasisOfRecordSerde.BasisOfRecordJsonSerializer
 
BasisOfRecordSerde - Class in org.gbif.api.jackson
Serializer for BasisOfRecord.
BasisOfRecordSerde() - Constructor for class org.gbif.api.jackson.BasisOfRecordSerde
 
BasisOfRecordSerde.BasisOfRecordJsonDeserializer - Class in org.gbif.api.jackson
Jackson JsonDeserializer for BasisOfRecord.
BasisOfRecordSerde.BasisOfRecordJsonSerializer - Class in org.gbif.api.jackson
Jackson JsonSerializer for BasisOfRecord.
Batch - Class in org.gbif.api.model.collections
A batch that can contain either institutions or collections to create or update them in bulk.
Batch() - Constructor for class org.gbif.api.model.collections.Batch
 
Batch.State - Enum in org.gbif.api.model.collections
 
BatchService - Interface in org.gbif.api.service.collections
Defines the service to work with batches.
BatchView - Class in org.gbif.api.model.collections.view
 
BatchView(Batch) - Constructor for class org.gbif.api.model.collections.view.BatchView
 
BibTexTerm - Class in org.gbif.dwc.terms
 
BibTexTerm(String) - Constructor for class org.gbif.dwc.terms.BibTexTerm
 
BoundingBox - Class in org.gbif.api.model.registry.eml.geospatial
Geographic coverage geometry in the form of 4 sided bounding box.
BoundingBox() - Constructor for class org.gbif.api.model.registry.eml.geospatial.BoundingBox
 
BoundingBox(double, double, double, double) - Constructor for class org.gbif.api.model.registry.eml.geospatial.BoundingBox
 
build() - Method in class org.gbif.api.model.collections.request.CollectionSearchRequest.Builder
 
build() - Method in class org.gbif.api.model.collections.request.InstitutionSearchRequest.Builder
 
build() - Method in class org.gbif.api.model.common.messaging.Request.Builder
 
build() - Method in class org.gbif.api.model.common.messaging.Response.Builder
 
build() - Method in class org.gbif.api.model.crawler.DatasetProcessStatus.Builder
 
build() - Method in class org.gbif.api.model.metrics.cube.ReadBuilder
 
build() - Method in class org.gbif.api.model.metrics.RecordError.Builder
Deprecated.
 
build() - Method in class org.gbif.api.model.pipelines.RunPipelineResponse.Builder
 
build(String) - Static method in class org.gbif.dwc.terms.UnknownTerm
 
build(String, boolean) - Static method in class org.gbif.dwc.terms.UnknownTerm
 
build(String, String) - Static method in class org.gbif.dwc.terms.UnknownTerm
 
build(String, String, boolean) - Static method in class org.gbif.dwc.terms.UnknownTerm
 
builder() - Static method in class org.gbif.api.model.collections.request.CollectionSearchRequest
 
Builder() - Constructor for class org.gbif.api.model.collections.request.CollectionSearchRequest.Builder
 
builder() - Static method in class org.gbif.api.model.collections.request.InstitutionSearchRequest
 
Builder() - Constructor for class org.gbif.api.model.collections.request.InstitutionSearchRequest.Builder
 
Builder() - Constructor for class org.gbif.api.model.common.messaging.Request.Builder
 
Builder() - Constructor for class org.gbif.api.model.common.messaging.Response.Builder
 
builder() - Static method in class org.gbif.api.model.crawler.DatasetProcessStatus
 
Builder() - Constructor for class org.gbif.api.model.crawler.DatasetProcessStatus.Builder
 
builder() - Static method in class org.gbif.api.model.metrics.RecordError
Deprecated.
 
Builder() - Constructor for class org.gbif.api.model.metrics.RecordError.Builder
Deprecated.
 
builder() - Static method in class org.gbif.api.model.pipelines.RunPipelineResponse
 
builder(RunPipelineResponse) - Static method in class org.gbif.api.model.pipelines.RunPipelineResponse
 
Builder() - Constructor for class org.gbif.api.model.pipelines.RunPipelineResponse.Builder
 
buildFromPrefix(String) - Static method in class org.gbif.dwc.terms.BibTexTerm
 
buildFromURI(String) - Static method in class org.gbif.dwc.terms.BibTexTerm
 
buildName(boolean, boolean, boolean, boolean, boolean, boolean, boolean, boolean, boolean, boolean, boolean, boolean, boolean, boolean) - Method in class org.gbif.api.model.checklistbank.ParsedName
build a name controlling all available flags for name parts to be included in the resulting name.
buildQuery(Predicate) - Method in interface org.gbif.api.query.QueryVisitor
 
byNubUsageId(int) - Static method in enum org.gbif.api.vocabulary.Kingdom
Deprecated.
please use byNubUsageId(int) instead
byNubUsageKey(int) - Static method in enum org.gbif.api.vocabulary.Kingdom
Looks up a kingdom by its nub usage key.

C

cancel(String) - Method in interface org.gbif.api.service.occurrence.DownloadRequestService
Cancels running download.
canonicalName() - Method in class org.gbif.api.model.checklistbank.ParsedName
The canonical name sensu strictu with nothing else but 3 name parts at max (genus, species, infraspecific).
canonicalNameComplete() - Method in class org.gbif.api.model.checklistbank.ParsedName
The code-compliant, canonical name with rank and hybrid marker, authorship and cultivar or strain name included.
canonicalNameWithMarker() - Method in class org.gbif.api.model.checklistbank.ParsedName
The code-compliant, canonical name with three name parts at max (genus, species, infraspecific), a rank marker for infraspecific names and cultivar or strain epithets.
canonicalSpeciesName() - Method in class org.gbif.api.model.checklistbank.ParsedName
 
catalogNumber(String) - Method in class org.gbif.api.model.metrics.RecordError.Builder
Deprecated.
 
ChallengeCode - Class in org.gbif.api.model
Encapsulate a challenge code.
ChallengeCode() - Constructor for class org.gbif.api.model.ChallengeCode
 
Change - Class in org.gbif.api.model.collections.suggestions
 
Change() - Constructor for class org.gbif.api.model.collections.suggestions.Change
 
ChangeSuggestion<T extends CollectionEntity> - Interface in org.gbif.api.model.collections.suggestions
 
ChangeSuggestionService<T extends CollectionEntity,R extends ChangeSuggestion<T>> - Interface in org.gbif.api.service.collections
Defines the service to suggest changes in GRSciColl entities.
checkArgument(boolean) - Static method in class org.gbif.api.util.PreconditionUtils
Ensures the truth of an expression involving one or more parameters to the calling method.
checkArgument(boolean, Object) - Static method in class org.gbif.api.util.PreconditionUtils
Ensures the truth of an expression involving one or more parameters to the calling method.
CHECKLIST_DATASET_SUBTYPES - Static variable in enum org.gbif.api.vocabulary.DatasetSubtype
A set of all DatasetSubtype that belong to DatasetType CHECKLIST.
Citation - Class in org.gbif.api.model.registry
A citation can have one or both of a textual component and an identifier which can be of any form, but expected to be resolvable in some way such as an LSID, DOI or similar.
Citation() - Constructor for class org.gbif.api.model.registry.Citation
 
Citation(String, String, boolean) - Constructor for class org.gbif.api.model.registry.Citation
 
CitationContact - Class in org.gbif.api.model.registry
A contact used to generate a dataset citation.
CitationContact() - Constructor for class org.gbif.api.model.registry.CitationContact
 
CitationContact(Integer, String, String, String, Set<ContactType>, Set<String>) - Constructor for class org.gbif.api.model.registry.CitationContact
 
CitationData() - Constructor for class org.gbif.api.util.CitationGenerator.CitationData
 
CitationGenerator - Class in org.gbif.api.util
Helper class tha generates a Citation String from Dataset and Organization objects.
CitationGenerator.CitationData - Class in org.gbif.api.util
 
CitesAppendix - Enum in org.gbif.api.vocabulary
Vocabulary for the 3 CITES (Convention on International Trade in Endangered Species of Wild Fauna and Flora) Appendix numbers.
city(String) - Method in class org.gbif.api.model.collections.request.CollectionSearchRequest.Builder
 
city(String) - Method in class org.gbif.api.model.collections.request.InstitutionSearchRequest.Builder
 
CLASS_TERM - Static variable in class org.gbif.dwc.terms.BibTexTerm
 
CLASS_TERMS - Static variable in enum org.gbif.dwc.terms.DwcTerm
List of all class terms in dwc.
ClassificationUtils - Class in org.gbif.api.util
 
closed(T, T) - Static method in class org.gbif.api.util.Range
Factory method.
code(String) - Method in class org.gbif.api.model.collections.request.CollectionSearchRequest.Builder
 
code(String) - Method in class org.gbif.api.model.collections.request.InstitutionSearchRequest.Builder
 
COL_DATASET_KEY - Static variable in class org.gbif.api.model.Constants
The dataset key for the Catalogue of Life.
Collection - Class in org.gbif.api.model.collections
A group of specimens or other natural history objects.
Collection() - Constructor for class org.gbif.api.model.collections.Collection
 
Collection - Class in org.gbif.api.model.registry.eml
Collection data for the Dataset.
Collection() - Constructor for class org.gbif.api.model.registry.eml.Collection
 
Collection(String, String, String, PreservationMethodType, List<CuratorialUnitComposite>) - Constructor for class org.gbif.api.model.registry.eml.Collection
 
CollectionChangeSuggestion - Class in org.gbif.api.model.collections.suggestions
 
CollectionChangeSuggestion() - Constructor for class org.gbif.api.model.collections.suggestions.CollectionChangeSuggestion
 
collectionCode(String) - Method in class org.gbif.api.model.metrics.RecordError.Builder
Deprecated.
 
CollectionContentType - Enum in org.gbif.api.vocabulary.collections
Types of a (sub) group of elements contained in collection..
CollectionEntity - Interface in org.gbif.api.model.collections
Entity .
CollectionEntityService<T extends CollectionEntity> - Interface in org.gbif.api.service.collections
 
CollectionEntityType - Enum in org.gbif.api.model.collections
 
CollectionImportParams - Class in org.gbif.api.model.collections
Contains the parameters to create a collection from a dataset.
CollectionImportParams() - Constructor for class org.gbif.api.model.collections.CollectionImportParams
 
CollectionMatched - Class in org.gbif.api.model.collections.lookup
 
CollectionMatched() - Constructor for class org.gbif.api.model.collections.lookup.CollectionMatched
 
collections(CollectionSearchRequest, CollectionService, Integer) - Static method in class org.gbif.api.util.iterables.Iterables
CollectionSearchRequest - Class in org.gbif.api.model.collections.request
 
CollectionSearchRequest() - Constructor for class org.gbif.api.model.collections.request.CollectionSearchRequest
 
CollectionSearchRequest.Builder - Class in org.gbif.api.model.collections.request
 
CollectionService - Interface in org.gbif.api.service.collections
API Service to work with collections.
CollectionsPager - Class in org.gbif.api.util.iterables
CollectionsPager(CollectionService, CollectionSearchRequest, int) - Constructor for class org.gbif.api.util.iterables.CollectionsPager
 
CollectionsSearchResponse - Class in org.gbif.api.model.collections.search
Models the response for the Collections search.
CollectionsSearchResponse() - Constructor for class org.gbif.api.model.collections.search.CollectionsSearchResponse
 
CollectionsSearchResponse.Match - Class in org.gbif.api.model.collections.search
 
CollectionsSortField - Enum in org.gbif.api.vocabulary
 
CollectionView - Class in org.gbif.api.model.collections.view
 
CollectionView() - Constructor for class org.gbif.api.model.collections.view.CollectionView
 
CollectionView(Collection) - Constructor for class org.gbif.api.model.collections.view.CollectionView
 
Comment - Class in org.gbif.api.model.registry
 
Comment() - Constructor for class org.gbif.api.model.registry.Comment
 
Commentable - Interface in org.gbif.api.model.registry
Generic comment interface for entities.
CommentService - Interface in org.gbif.api.service.registry
Service provides a set of operations on Comment.
CommonParameters - Class in org.gbif.api.documentation
 
CommonParameters() - Constructor for class org.gbif.api.documentation.CommonParameters
 
CommonParameters.HighlightParameter - Annotation Type in org.gbif.api.documentation
The usual (search) limit and offset parameters
CommonParameters.QParameter - Annotation Type in org.gbif.api.documentation
A normal full-text search parameter.
compare(Endpoint, Endpoint) - Method in class org.gbif.api.util.comparators.EndpointCreatedComparator
 
compare(Endpoint, Endpoint) - Method in class org.gbif.api.util.comparators.EndpointPriorityComparator
 
compare(Term, Term) - Method in class org.gbif.dwc.terms.TermComparator
 
compareTo(DistanceUnit.Distance) - Method in class org.gbif.api.model.occurrence.geo.DistanceUnit.Distance
 
CompoundPredicate - Class in org.gbif.api.model.predicate
A compound predicate is a Predicate that itself contains other Predicates.
computeCompleteName() - Method in class org.gbif.api.model.registry.Contact
Compute and returns the complete name in the form: FirstName LastName.
ConfirmationKeyParameter - Class in org.gbif.api.model.registry
Confirmation key is a UUID used to confirm an entity.
ConfirmationKeyParameter() - Constructor for class org.gbif.api.model.registry.ConfirmationKeyParameter
 
ConfirmationKeyParameter(UUID) - Constructor for class org.gbif.api.model.registry.ConfirmationKeyParameter
 
confirmEndorsement(UUID, UUID) - Method in interface org.gbif.api.service.registry.OrganizationService
Confirm the endorsement of a new Organization by providing a confirmationKey.
confirmEndorsement(UUID) - Method in interface org.gbif.api.service.registry.OrganizationService
Confirm the endorsement of a new Organization without a confirmationKey.
ConjunctionPredicate - Class in org.gbif.api.model.predicate
This predicate is "AND"-ing its subpredicates together.
ConjunctionPredicate(Collection<Predicate>) - Constructor for class org.gbif.api.model.predicate.ConjunctionPredicate
 
Constants - Class in org.gbif.api.model
Common variables used by API.
constituentDatasets(UUID, DatasetService) - Static method in class org.gbif.api.util.iterables.Iterables
 
Contact - Class in org.gbif.api.model.collections
Contact associated to a GRSciColl Collection or Institution.
Contact() - Constructor for class org.gbif.api.model.collections.Contact
 
Contact - Class in org.gbif.api.model.registry
 
Contact() - Constructor for class org.gbif.api.model.registry.Contact
 
Contactable - Interface in org.gbif.api.model.collections
Entity that can have a list of contacts and addresses.
Contactable - Interface in org.gbif.api.model.registry
Generic contact interface for entities.
ContactAdapter - Class in org.gbif.api.util
Adapt the Dataset Contact list for what metadata documents generally want.
ContactAdapter(List<Contact>) - Constructor for class org.gbif.api.util.ContactAdapter
 
ContactService - Interface in org.gbif.api.service.collections
API Service for the contacts in the collections service.
ContactService - Interface in org.gbif.api.service.registry
Service provides a set of operations on Contact.
ContactType - Enum in org.gbif.api.vocabulary
Enumeration for all contact types.
contains(T) - Method in class org.gbif.api.util.Range
Returns true if value is within the bounds of this range.
containsCollectionParams() - Method in class org.gbif.api.model.collections.lookup.LookupParams
 
containsInstitutionParams() - Method in class org.gbif.api.model.collections.lookup.LookupParams
 
content(T) - Method in class org.gbif.api.model.common.messaging.Request.Builder
 
content(T) - Method in class org.gbif.api.model.common.messaging.Response.Builder
 
contentTypes(List<CollectionContentType>) - Method in class org.gbif.api.model.collections.request.CollectionSearchRequest.Builder
 
context(Map<String, String>) - Method in class org.gbif.api.model.common.messaging.Request.Builder
 
contextParam(Map.Entry<String, String>) - Method in class org.gbif.api.model.common.messaging.Request.Builder
 
contextParam(String, String) - Method in class org.gbif.api.model.common.messaging.Request.Builder
 
Continent - Enum in org.gbif.api.vocabulary
Enumeration for all continents based on the 7 continent model found on Wikipedia and the World Geographical Scheme for Recording Plant Distributions (WGSRPD).
convert(double, DistanceUnit, DistanceUnit) - Static method in enum org.gbif.api.model.occurrence.geo.DistanceUnit
Converts the given distance from the given DistanceUnit, to the given DistanceUnit
convertToCollection(UUID, UUID) - Method in interface org.gbif.api.service.collections.InstitutionService
Converts an institution into a collection.
ConvertToCollectionParams - Class in org.gbif.api.model.collections.merge
 
ConvertToCollectionParams() - Constructor for class org.gbif.api.model.collections.merge.ConvertToCollectionParams
 
copyLinneanClassification(LinneanClassification, LinneanClassification) - Static method in class org.gbif.api.util.ClassificationUtils
Copies all linnean classification based higher taxon names from one instance to another.
copyLinneanClassificationKeys(LinneanClassificationKeys, LinneanClassificationKeys) - Static method in class org.gbif.api.util.ClassificationUtils
Copies all linnean classification based higher taxon keys from one instance to another.
copyPagingValues(Pageable) - Method in class org.gbif.api.model.common.paging.PageableBase
Utility method to copy paging values.
copyTo(Response<?>) - Method in class org.gbif.api.model.common.messaging.Response
 
Count() - Constructor for class org.gbif.api.model.common.search.Facet.Count
Null/empty constructor.
Count(String, Long) - Constructor for class org.gbif.api.model.common.search.Facet.Count
Full constructor.
count(Set<Download.Status>, String) - Method in interface org.gbif.api.service.registry.OccurrenceDownloadService
Counts downloads based on the given parameters.
countByUser(String, Set<Download.Status>, LocalDateTime) - Method in interface org.gbif.api.service.registry.OccurrenceDownloadService
Counts the downloads created by a user.
countriesForPublishingCountry(Country) - Method in interface org.gbif.api.service.occurrence.OccurrenceCountryIndexService
Lists all countries occurrences are falling into that have been published by a given country.
country(List<Country>) - Method in class org.gbif.api.model.collections.request.CollectionSearchRequest.Builder
 
country(List<Country>) - Method in class org.gbif.api.model.collections.request.InstitutionSearchRequest.Builder
 
COUNTRY - Static variable in class org.gbif.api.model.metrics.cube.OccurrenceCube
 
Country - Enum in org.gbif.api.vocabulary
An enumeration for all current ISO 3166-1 Alpha-2 and Alpha-3 country codes.
Country.IsoDeserializer - Class in org.gbif.api.vocabulary
Deserializes the value from a 2-letter ISO format.
Country.IsoSerializer - Class in org.gbif.api.vocabulary
Serializes the value in a 2-letter ISO format.
Country.TitleDeserializer - Class in org.gbif.api.vocabulary
Deserializes the value from an English country title exactly as given by the enumeration.
Country.TitleSerializer - Class in org.gbif.api.vocabulary
Serializes the value as the English country title.
CountryOccurrenceDownloadUsage - Class in org.gbif.api.model.registry
Represents the information about the usage of one country in an occurrence download.
CountryOccurrenceDownloadUsage() - Constructor for class org.gbif.api.model.registry.CountryOccurrenceDownloadUsage
 
CountryUsageSortField - Enum in org.gbif.api.vocabulary
Fields to sort by the country usages in an occurrence download.
crawlContext(String) - Method in class org.gbif.api.model.crawler.DatasetProcessStatus.Builder
 
CrawlJob - Class in org.gbif.api.model.crawler
This class represents a job to be worked on by a crawler.
CrawlJob(UUID, EndpointType, URI, int, Map<String, String>) - Constructor for class org.gbif.api.model.crawler.CrawlJob
Creates a new crawl job.
CrawlJob(UUID, Integer, EndpointType, URI) - Constructor for class org.gbif.api.model.crawler.CrawlJob
Constructor with mandatory fields.
crawlJob(CrawlJob) - Method in class org.gbif.api.model.crawler.DatasetProcessStatus.Builder
 
create(T) - Method in interface org.gbif.api.service.collections.CrudService
Creates a new entity.
create(W) - Method in interface org.gbif.api.service.common.CrudService
Persists a new entity.
create(DownloadRequest, String) - Method in interface org.gbif.api.service.occurrence.DownloadRequestService
Creates a download request.
create(T) - Method in interface org.gbif.api.service.registry.NetworkEntityService
Creates a new entity.
create(Download) - Method in interface org.gbif.api.service.registry.OccurrenceDownloadService
Persists the occurrence download object.
createChangeSuggestion(R) - Method in interface org.gbif.api.service.collections.ChangeSuggestionService
 
createDatasetProcessStatus(DatasetProcessStatus) - Method in interface org.gbif.api.service.registry.DatasetProcessStatusService
Persists the DatasetProcessStatus object.
createFromDataset(UUID, String) - Method in interface org.gbif.api.service.collections.CollectionService
Creates a Collection from a Dataset.
createFromOrganization(UUID, String) - Method in interface org.gbif.api.service.collections.InstitutionService
Creates a Institution from a Organization.
createMetasync(MetasyncHistory) - Method in interface org.gbif.api.service.registry.MetasyncHistoryService
Persists the MetasyncHistory object.
createPipelineProcess(PipelineProcessParameters) - Method in interface org.gbif.api.service.pipelines.PipelinesHistoryService
Creates/persists a pipelines process of dataset for an attempt identifier.
createUsages(String, Map<UUID, Long>) - Method in interface org.gbif.api.service.registry.OccurrenceDownloadService
Persists usages of datasets in an occurrence download.
CrudService<T extends CollectionEntity> - Interface in org.gbif.api.service.collections
Base CRUD service for CollectionEntity entities.
CrudService<T,W,K> - Interface in org.gbif.api.service.common
A generic CRUD service interface for any writable entity.
CubeService - Interface in org.gbif.api.service.metrics
The cube API service, for reading addressable counts from a basic cube.
CuratorialUnit - Class in org.gbif.api.model.registry.eml.curatorial
The base class of all curatorial units.
CuratorialUnitComposite - Class in org.gbif.api.model.registry.eml.curatorial
Composite class, combining fields from CuratorialUnitCount and CuratorialUnitRange for simpler parsing of curatorial units, since both count and range types share the same root element.
CuratorialUnitComposite() - Constructor for class org.gbif.api.model.registry.eml.curatorial.CuratorialUnitComposite
 
CuratorialUnitComposite(int, int, int, int, String) - Constructor for class org.gbif.api.model.registry.eml.curatorial.CuratorialUnitComposite
 
CuratorialUnitCount - Class in org.gbif.api.model.registry.eml.curatorial
Used for acuratorial unit count with uncertainty.
CuratorialUnitCount() - Constructor for class org.gbif.api.model.registry.eml.curatorial.CuratorialUnitCount
 
CuratorialUnitCount(CuratorialUnitType, String, int, int) - Constructor for class org.gbif.api.model.registry.eml.curatorial.CuratorialUnitCount
 
CuratorialUnitRange - Class in org.gbif.api.model.registry.eml.curatorial
Used to indicate that the curatorial unit falls within a range of values.
CuratorialUnitRange() - Constructor for class org.gbif.api.model.registry.eml.curatorial.CuratorialUnitRange
 
CuratorialUnitRange(CuratorialUnitType, String, int, int) - Constructor for class org.gbif.api.model.registry.eml.curatorial.CuratorialUnitRange
 
CuratorialUnitType - Enum in org.gbif.api.model.registry.eml.curatorial
Allows for typed units.
CUSTOM_CODES - Static variable in enum org.gbif.api.vocabulary.Country
A set of all 2- and 3-letter codes that are reserved by ISO for custom application specific usages.

D

DataDescription - Class in org.gbif.api.model.registry.eml
Describes the format of externally available data on a URL.
DataDescription() - Constructor for class org.gbif.api.model.registry.eml.DataDescription
 
DataDescription(String, String, URI, String, String) - Constructor for class org.gbif.api.model.registry.eml.DataDescription
 
Dataset - Class in org.gbif.api.model.registry
A GBIF dataset which provides occurrence data, checklist data, sampling event data or metadata.
Dataset() - Constructor for class org.gbif.api.model.registry.Dataset
 
DATASET_KEY - Static variable in class org.gbif.api.model.metrics.cube.OccurrenceCube
 
DatasetConstituentPager - Class in org.gbif.api.util.iterables
Iterates over all dataset constituents of a given super dataset.
DatasetConstituentPager(DatasetService, UUID, int) - Constructor for class org.gbif.api.util.iterables.DatasetConstituentPager
 
datasetKey(UUID) - Method in class org.gbif.api.model.crawler.DatasetProcessStatus.Builder
 
DatasetKey - Class in org.gbif.api.util
A typed dataset key for both registered and external datasets.
DatasetKey(UUID) - Constructor for class org.gbif.api.util.DatasetKey
Constructor for a registered dataset key.
DatasetKey(UUID, String) - Constructor for class org.gbif.api.util.DatasetKey
Constructor for an external dataset key.
DatasetMetrics - Class in org.gbif.api.model.checklistbank
Simple metrics about a single, processed checklist dataset in time.
DatasetMetrics() - Constructor for class org.gbif.api.model.checklistbank.DatasetMetrics
 
DatasetMetricsService - Interface in org.gbif.api.service.checklistbank
 
DatasetMixin - Interface in org.gbif.api.ws.mixin
 
DatasetOccurrenceDownloadUsage - Class in org.gbif.api.model.registry
Represents the information about the usage of one dataset in an occurrence download.
DatasetOccurrenceDownloadUsage() - Constructor for class org.gbif.api.model.registry.DatasetOccurrenceDownloadUsage
 
datasetOccurrenceDownloadUsages(OccurrenceDownloadService, String, Integer) - Static method in class org.gbif.api.util.iterables.Iterables
DatasetOccurrenceDownloadUsageService - Interface in org.gbif.api.service.registry
Interface to access and persists information about occurrence download events.
DatasetOccurrenceDownloadUsagesPager - Class in org.gbif.api.util.iterables
DatasetOccurrenceDownloadUsagesPager(OccurrenceDownloadService, String, int) - Constructor for class org.gbif.api.util.iterables.DatasetOccurrenceDownloadUsagesPager
 
DatasetPager - Class in org.gbif.api.util.iterables
Pages through all datasets filtering by type only.
DatasetPager(DatasetService, DatasetType, int) - Constructor for class org.gbif.api.util.iterables.DatasetPager
 
DatasetProcessService - Interface in org.gbif.api.service.crawler
This service exposes information regarding current crawling process and is not intended to provide historical information.
DatasetProcessStatus - Class in org.gbif.api.model.crawler
Information about a dataset that is currently being processed.
DatasetProcessStatus() - Constructor for class org.gbif.api.model.crawler.DatasetProcessStatus
 
DatasetProcessStatus(DatasetProcessStatus.Builder) - Constructor for class org.gbif.api.model.crawler.DatasetProcessStatus
Builds a new object from the builder validating it in the process.
DatasetProcessStatus.Builder - Class in org.gbif.api.model.crawler
 
DatasetProcessStatusService - Interface in org.gbif.api.service.registry
Interface to access and persist information about dataset processing statuses.
DatasetRequestSearchParams - Class in org.gbif.api.model.registry.search
Parameters to list datasets.
DatasetRequestSearchParams() - Constructor for class org.gbif.api.model.registry.search.DatasetRequestSearchParams
 
datasets(UUID, DatasetType, DatasetService, OrganizationService, InstallationService, NetworkService, NodeService) - Static method in class org.gbif.api.util.iterables.Iterables
 
datasets(UUID, DatasetType, DatasetService, OrganizationService, InstallationService, NetworkService, NodeService, int) - Static method in class org.gbif.api.util.iterables.Iterables
Returns a dataset iterable by testing the given registry key first to see whether it is a dataset, organization or installation.
datasets(DatasetType, DatasetService) - Static method in class org.gbif.api.util.iterables.Iterables
 
DatasetSearchParameter - Enum in org.gbif.api.model.registry.search
Each value in the enum represents a possible facet for the Dataset search.
DatasetSearchRequest - Class in org.gbif.api.model.registry.search
A dataset specific search request with convenience methods to add facet filters.
DatasetSearchRequest() - Constructor for class org.gbif.api.model.registry.search.DatasetSearchRequest
 
DatasetSearchRequest(Pageable) - Constructor for class org.gbif.api.model.registry.search.DatasetSearchRequest
 
DatasetSearchRequest(long, int) - Constructor for class org.gbif.api.model.registry.search.DatasetSearchRequest
 
DatasetSearchResult - Class in org.gbif.api.model.registry.search
The dataset search model object for faceted and full text search.
DatasetSearchResult() - Constructor for class org.gbif.api.model.registry.search.DatasetSearchResult
 
datasetSearchResults(DatasetSearchRequest, DatasetSearchService, Integer) - Static method in class org.gbif.api.util.iterables.Iterables
Iterates over dataset search results.
DatasetSearchResultsPager - Class in org.gbif.api.util.iterables
Pages through all datasets search results.
DatasetSearchResultsPager(DatasetSearchService, DatasetSearchRequest, int) - Constructor for class org.gbif.api.util.iterables.DatasetSearchResultsPager
 
DatasetSearchService - Interface in org.gbif.api.service.registry
Interface that provides search and suggest operations over Datasets.
DatasetService - Interface in org.gbif.api.service.registry
 
datasetsIterable(Function<PagingRequest, PagingResponse<Dataset>>) - Static method in class org.gbif.api.util.iterables.Iterables
 
DatasetSubtype - Enum in org.gbif.api.vocabulary
Enumeration for all possible dataset subtypes.
DatasetSuggestRequest - Class in org.gbif.api.model.registry.search
A dataset specific suggest request.
DatasetSuggestRequest() - Constructor for class org.gbif.api.model.registry.search.DatasetSuggestRequest
 
DatasetSuggestResult - Class in org.gbif.api.model.registry.search
The dataset search model object for suggest searches of datasets.
DatasetSuggestResult() - Constructor for class org.gbif.api.model.registry.search.DatasetSuggestResult
 
DatasetType - Enum in org.gbif.api.vocabulary
Enumeration for all possible dataset types.
DatasetUsageSortField - Enum in org.gbif.api.vocabulary
Fields to sort by the dataset usages in an occurrence download.
DateRange - Class in org.gbif.api.model.registry.eml.temporal
A period of time.
DateRange() - Constructor for class org.gbif.api.model.registry.eml.temporal.DateRange
 
DateRange(Date, Date) - Constructor for class org.gbif.api.model.registry.eml.temporal.DateRange
 
DateSerde - Class in org.gbif.api.jackson
Jackson JsonSerializer classes for Dates with specified formats.
DateSerde() - Constructor for class org.gbif.api.jackson.DateSerde
 
DateSerde.FlexibleDateJsonDeserializer - Class in org.gbif.api.jackson
Jackson JsonDeserializer for Dates formatted above, falling back to the Jackson way.
DateSerde.NoTimezoneDateJsonSerializer - Class in org.gbif.api.jackson
Jackson JsonSerializer for Date.
DcElement - Enum in org.gbif.dwc.terms
All Dublin Core terms with namespace http://purl.org/dc/elements/1.1/.
DcTerm - Enum in org.gbif.dwc.terms
All Dublin Core terms with namespace http://purl.org/dc/terms/.
declaredCount(Long) - Method in class org.gbif.api.model.crawler.DatasetProcessStatus.Builder
 
decompose(String) - Static method in class org.gbif.api.util.UnicodeUtils
Replaces all digraphs and ligatures with their underlying 2 latin letters.
DEFAULT - Static variable in enum org.gbif.api.model.occurrence.geo.DistanceUnit
 
DEFAULT_PARAM_LIMIT - Static variable in class org.gbif.api.model.common.paging.PagingConstants
Default number of records to return.
DEFAULT_PARAM_OFFSET - Static variable in class org.gbif.api.model.common.paging.PagingConstants
Default start index in a result list of elements.
DEFAULT_SUGGEST_LIMIT - Static variable in class org.gbif.api.model.common.search.SearchConstants
Default limit value for auto-suggest services.
delete(UUID) - Method in interface org.gbif.api.service.collections.CrudService
Deletes an entity by key.
delete(K) - Method in interface org.gbif.api.service.common.CrudService
Deletes the entity.
delete(UUID) - Method in interface org.gbif.api.service.registry.NetworkEntityService
Deletes an entity by the provided key.
deleteComment(UUID, int) - Method in interface org.gbif.api.service.registry.CommentService
Delete an existing Comment from a target entity by comment key.
deleteContact(UUID, int) - Method in interface org.gbif.api.service.registry.ContactService
Delete an existing Contact from a target entity by contact key.
deleteEndpoint(UUID, int) - Method in interface org.gbif.api.service.registry.EndpointService
Delete an existing Endpoint from a target entity by endpoint key.
deleteIdentifier(UUID, int) - Method in interface org.gbif.api.service.registry.IdentifierService
Delete an existing Identifier from a target entity by identifier key.
deleteMachineTag(UUID, int) - Method in interface org.gbif.api.service.registry.MachineTagService
Delete an existing MachineTag from a tagged entity by tag key.
deleteMachineTags(UUID, TagNamespace) - Method in interface org.gbif.api.service.registry.MachineTagService
Delete machine tags from a tagged entity by tag namespace.
deleteMachineTags(UUID, String) - Method in interface org.gbif.api.service.registry.MachineTagService
Delete machine tags from a tagged entity by tag namespace.
deleteMachineTags(UUID, TagName) - Method in interface org.gbif.api.service.registry.MachineTagService
Delete machine tags from a tagged entity by tag name.
deleteMachineTags(UUID, String, String) - Method in interface org.gbif.api.service.registry.MachineTagService
Delete machine tags from a tagged entity by namespace and tag name.
deleteMasterSourceMetadata(UUID) - Method in interface org.gbif.api.service.collections.CollectionEntityService
Removes the MasterSourceMetadata from an entity.
deleteMetadata(int) - Method in interface org.gbif.api.service.registry.DatasetService
Removes a metadata entry and its document by its key.
deleteOccurrenceMapping(UUID, int) - Method in interface org.gbif.api.service.collections.OccurrenceMappingService
Delete an existing OccurrenceMapping from a target entity by OccurrenceMapping key.
deleteTag(UUID, int) - Method in interface org.gbif.api.service.registry.TagService
Delete an existing Tag from a tagged entity by tag key.
Description - Class in org.gbif.api.model.checklistbank
Description Model Object represents a taxon description.
Description() - Constructor for class org.gbif.api.model.checklistbank.Description
 
DescriptionService - Interface in org.gbif.api.service.checklistbank
Service interface for Description Interface methods.
deserialize(JsonParser, DeserializationContext) - Method in class org.gbif.api.jackson.BasisOfRecordSerde.BasisOfRecordJsonDeserializer
 
deserialize(JsonParser, DeserializationContext) - Method in class org.gbif.api.jackson.DateSerde.FlexibleDateJsonDeserializer
 
deserialize(JsonParser, DeserializationContext) - Method in class org.gbif.api.jackson.DownloadRequestSerde
 
deserialize(JsonParser, DeserializationContext) - Method in class org.gbif.api.jackson.EmptyToNullUriDeserializer
 
deserialize(JsonParser, DeserializationContext) - Method in class org.gbif.api.jackson.ExtensionDeserializer
 
deserialize(JsonParser, DeserializationContext) - Method in class org.gbif.api.jackson.IsoDateIntervalSerde.IsoDateIntervalDeserializer
 
deserialize(JsonParser, DeserializationContext) - Method in class org.gbif.api.jackson.LicenseSerde.LicenseJsonDeserializer
 
deserialize(JsonParser, DeserializationContext) - Method in class org.gbif.api.jackson.LocalDateTimeSerDe.LocalDateTimeDeserializer
 
deserialize(JsonParser, DeserializationContext) - Method in class org.gbif.api.jackson.MapEntrySerde.MapEntryJsonDeserializer
Deprecated.
 
deserialize(JsonParser, DeserializationContext) - Method in class org.gbif.api.jackson.RankSerde.RankJsonDeserializer
 
deserialize(JsonParser, DeserializationContext) - Method in class org.gbif.api.jackson.TermMapListDeserializer
Deprecated.
 
deserialize(JsonParser, DeserializationContext) - Method in class org.gbif.api.model.common.DOI.DoiDeserializer
 
deserialize(JsonParser, DeserializationContext) - Method in class org.gbif.api.vocabulary.Country.IsoDeserializer
 
deserialize(JsonParser, DeserializationContext) - Method in class org.gbif.api.vocabulary.Country.TitleDeserializer
 
deserialize(JsonParser, DeserializationContext) - Method in class org.gbif.api.vocabulary.Language.LenientDeserializer
 
deserialize(JsonParser, DeserializationContext) - Method in class org.gbif.dwc.terms.jackson.TermDeserializer
 
deserializeKey(String, DeserializationContext) - Method in class org.gbif.api.jackson.ExtensionKeyDeserializer
 
deserializeKey(String, DeserializationContext) - Method in class org.gbif.api.vocabulary.Language.LenientKeyDeserializer
 
deserializeKey(String, DeserializationContext) - Method in class org.gbif.dwc.terms.jackson.TermKeyDeserializer
 
Diagnostics() - Constructor for class org.gbif.api.v2.NameUsageMatch2.Diagnostics
 
Dimension<T> - Class in org.gbif.api.model.metrics.cube
A typed dimension to a cube, which is constructed with a unique key.
Dimension(String, Class<T>) - Constructor for class org.gbif.api.model.metrics.cube.Dimension
Force the provision of the key in construction, which should be unique for the cube.
Dimension() - Constructor for class org.gbif.api.model.metrics.cube.Dimension
Prefer use of the constructor taking the parameters over this method.
DIMENSIONS - Static variable in class org.gbif.api.model.metrics.cube.OccurrenceCube
 
discardChangeSuggestion(int) - Method in interface org.gbif.api.service.collections.ChangeSuggestionService
 
Discipline - Enum in org.gbif.api.vocabulary.collections
Academic or research discipline to which an institution is dedicated.
disciplines(List<Discipline>) - Method in class org.gbif.api.model.collections.request.InstitutionSearchRequest.Builder
 
DisjunctionPredicate - Class in org.gbif.api.model.predicate
This predicate is "OR"-ing its subpredicates together.
DisjunctionPredicate(Collection<Predicate>) - Constructor for class org.gbif.api.model.predicate.DisjunctionPredicate
 
displayOnNHCPortal(boolean) - Method in class org.gbif.api.model.collections.request.CollectionSearchRequest.Builder
 
displayOnNHCPortal(boolean) - Method in class org.gbif.api.model.collections.request.InstitutionSearchRequest.Builder
 
Distance(double, DistanceUnit) - Constructor for class org.gbif.api.model.occurrence.geo.DistanceUnit.Distance
 
DistanceUnit - Enum in org.gbif.api.model.occurrence.geo
The DistanceUnit enumerates several units for measuring distances.
DistanceUnit.Distance - Class in org.gbif.api.model.occurrence.geo
 
DistanceUnit.GeoDistance - Class in org.gbif.api.model.occurrence.geo
 
Distribution - Class in org.gbif.api.model.checklistbank
Distribution Model Object represents a species distribution.
Distribution() - Constructor for class org.gbif.api.model.checklistbank.Distribution
 
DistributionService - Interface in org.gbif.api.service.checklistbank
Service interface for Distribution Interface methods.
DistributionStatus - Enum in org.gbif.api.vocabulary
A statement about the presence or absence of a Taxon at a Location.
DOI - Class in org.gbif.api.model.common
Class representing a single Digital Object Identifier (DOI) breaking it down to a prefix and suffix.
DOI() - Constructor for class org.gbif.api.model.common.DOI
Do not use this constructor.
DOI(String) - Constructor for class org.gbif.api.model.common.DOI
Parses a simple DOI string of various forms incl URN, URL or plain DOI names.
DOI(String, String) - Constructor for class org.gbif.api.model.common.DOI
Parses a simple DOI string of various forms incl URN, URL or plain DOI names.
DOI.DoiDeserializer - Class in org.gbif.api.model.common
 
DOI.DoiSerializer - Class in org.gbif.api.model.common
 
DoiData - Class in org.gbif.api.model.common
Data about a DOI with a target URI and a status enumeration.
DoiData(DoiStatus, URI) - Constructor for class org.gbif.api.model.common.DoiData
 
DoiData(String, URI) - Constructor for class org.gbif.api.model.common.DoiData
 
DoiData(DoiStatus) - Constructor for class org.gbif.api.model.common.DoiData
 
DoiDeserializer() - Constructor for class org.gbif.api.model.common.DOI.DoiDeserializer
 
DoiSerializer() - Constructor for class org.gbif.api.model.common.DOI.DoiSerializer
 
DoiStatus - Enum in org.gbif.api.model.common
This enumeration represents the status of a DOI identifier.
Download - Class in org.gbif.api.model.occurrence
 
Download() - Constructor for class org.gbif.api.model.occurrence.Download
 
Download.Status - Enum in org.gbif.api.model.occurrence
Reflects the possibles statuses of a download during its execution.
DownloadFormat - Enum in org.gbif.api.model.occurrence
Download output requested format.
DownloadLauncherService - Interface in org.gbif.api.service.occurrence
 
DownloadRequest - Class in org.gbif.api.model.occurrence
Represents a request to download occurrence records.
DownloadRequest() - Constructor for class org.gbif.api.model.occurrence.DownloadRequest
Default constructor.
DownloadRequest(String, Collection<String>, Boolean, DownloadFormat, DownloadType) - Constructor for class org.gbif.api.model.occurrence.DownloadRequest
 
DownloadRequestSerde - Class in org.gbif.api.jackson
Download request deserializer.
DownloadRequestSerde() - Constructor for class org.gbif.api.jackson.DownloadRequestSerde
 
DownloadRequestService - Interface in org.gbif.api.service.occurrence
Provides services to manage download requests and retrieve the download file.
DownloadStatisticPager - Class in org.gbif.api.util.iterables
DownloadStatisticPager(OccurrenceDownloadService, Date, Date, Country, UUID, UUID, int) - Constructor for class org.gbif.api.util.iterables.DownloadStatisticPager
 
DownloadStatistics - Class in org.gbif.api.model.occurrence
Monthly dataset download statistics.
DownloadStatistics() - Constructor for class org.gbif.api.model.occurrence.DownloadStatistics
 
DownloadStatistics(UUID, Long, Long, LocalDate) - Constructor for class org.gbif.api.model.occurrence.DownloadStatistics
 
downloadStatistics(OccurrenceDownloadService, Date, Date, Country, UUID, UUID, Integer) - Static method in class org.gbif.api.util.iterables.Iterables
DownloadType - Enum in org.gbif.api.model.occurrence
Defines the type of citable data download.
Duplicate - Class in org.gbif.api.model.collections.duplicates
Models a duplicate in GRSciColl.
Duplicate() - Constructor for class org.gbif.api.model.collections.duplicates.Duplicate
 
DuplicatesRequest - Class in org.gbif.api.model.collections.duplicates
Request to be used for the GRSciColl API duplicates services.
DuplicatesRequest() - Constructor for class org.gbif.api.model.collections.duplicates.DuplicatesRequest
 
DuplicatesResult - Class in org.gbif.api.model.collections.duplicates
Result to be used for the GRSciColl API duplicates services.
DuplicatesResult() - Constructor for class org.gbif.api.model.collections.duplicates.DuplicatesResult
 
DWC_RANKS - Static variable in enum org.gbif.api.vocabulary.Rank
An ordered list of all ranks that appear in Darwin Core with their own term.
DwcaTerm - Enum in org.gbif.dwc.terms
Darwin Core Archive terms with namespace http://rs.tdwg.org/dwc/text/.
DwcaValidationReport - Class in org.gbif.api.model.crawler
A report of the validity of a DwC-A.
DwcaValidationReport(UUID, OccurrenceValidationReport, GenericValidationReport, String) - Constructor for class org.gbif.api.model.crawler.DwcaValidationReport
 
DwcaValidationReport(UUID, OccurrenceValidationReport) - Constructor for class org.gbif.api.model.crawler.DwcaValidationReport
 
DwcaValidationReport(UUID, GenericValidationReport) - Constructor for class org.gbif.api.model.crawler.DwcaValidationReport
 
DwcaValidationReport(UUID, String) - Constructor for class org.gbif.api.model.crawler.DwcaValidationReport
 
DwcModule - Class in org.gbif.dwc.terms.jackson
 
DwcModule() - Constructor for class org.gbif.dwc.terms.jackson.DwcModule
 
DwcTerm - Enum in org.gbif.dwc.terms
All Darwin Core terms with namespace http://rs.tdwg.org/dwc/terms/ as an enumeration with alternative term names found sometimes in data.

E

earliestDate(String) - Method in enum org.gbif.api.util.IsoDateParsingUtils.IsoDateFormat
Returns the earliest date of a possible closed range, e.g.
EBIRD_DATASET_KEY - Static variable in class org.gbif.api.model.Constants
The dataset key for the EOD - eBird Observation Dataset.
Edge(T) - Constructor for class org.gbif.api.model.pipelines.PipelinesWorkflow.Graph.Edge
 
EmailConstraintValidator - Class in org.gbif.api.util.validators.email
ConstraintValidator that validates emails.
EmailConstraintValidator() - Constructor for class org.gbif.api.util.validators.email.EmailConstraintValidator
 
EmptyToNull - Annotation Type in org.gbif.api.annotation
Indicates that the field is suitable to convert empty strings into null.
EmptyToNullUriDeserializer - Class in org.gbif.api.jackson
 
EmptyToNullUriDeserializer() - Constructor for class org.gbif.api.jackson.EmptyToNullUriDeserializer
 
encloses(Range<T>) - Method in class org.gbif.api.util.Range
Returns true if the bounds of other do not extend outside the bounds of this range.
ENDORSED_BY_PARAM - Static variable in class org.gbif.api.model.registry.search.InstallationRequestSearchParams
 
endorsedDatasets(UUID, Pageable) - Method in interface org.gbif.api.service.registry.NodeService
Provides paging service to list datasets published, i.e.
endorsedDatasets(UUID, DatasetType, NodeService) - Static method in class org.gbif.api.util.iterables.Iterables
 
endorsedOrganizations(UUID, Pageable) - Method in interface org.gbif.api.service.registry.NodeService
Provides access to the organizations endorsed by a single node.
endorsedOrganizations(UUID, NodeService) - Static method in class org.gbif.api.util.iterables.Iterables
 
EndorsementStatus - Enum in org.gbif.api.model.registry
 
Endpoint - Class in org.gbif.api.model.registry
 
Endpoint() - Constructor for class org.gbif.api.model.registry.Endpoint
 
Endpointable - Interface in org.gbif.api.model.registry
Generic endpoint interface for entities.
EndpointCreatedComparator - Class in org.gbif.api.util.comparators
An ordering that uses the created date of an endpoint for ordering.
EndpointPriorityComparator - Class in org.gbif.api.util.comparators
Compares two Endpoints.
EndpointPriorityComparator() - Constructor for class org.gbif.api.util.comparators.EndpointPriorityComparator
 
EndpointService - Interface in org.gbif.api.service.registry
Service provides a set of operations on Endpoint.
EndpointType - Enum in org.gbif.api.vocabulary
Enumeration for all endpoint types.
EntityMatched - Interface in org.gbif.api.model.collections.lookup
 
EntityWithLogoMixin - Interface in org.gbif.api.ws.mixin
 
equals(Object) - Method in class org.gbif.api.model.checklistbank.DatasetMetrics
 
equals(Object) - Method in class org.gbif.api.model.checklistbank.Description
 
equals(Object) - Method in class org.gbif.api.model.checklistbank.Distribution
 
equals(Object) - Method in class org.gbif.api.model.checklistbank.NameUsage
 
equals(Object) - Method in class org.gbif.api.model.checklistbank.NameUsageContainer
 
equals(Object) - Method in class org.gbif.api.model.checklistbank.NameUsageMatch
 
equals(Object) - Method in class org.gbif.api.model.checklistbank.NameUsageMetrics
 
equals(Object) - Method in class org.gbif.api.model.checklistbank.ParsedName
 
equals(Object) - Method in class org.gbif.api.model.checklistbank.Reference
 
equals(Object) - Method in class org.gbif.api.model.checklistbank.search.NameUsageSearchResult
 
equals(Object) - Method in class org.gbif.api.model.checklistbank.search.NameUsageSuggestResult
 
equals(Object) - Method in class org.gbif.api.model.checklistbank.SpeciesProfile
 
equals(Object) - Method in class org.gbif.api.model.checklistbank.TableOfContents
 
equals(Object) - Method in class org.gbif.api.model.checklistbank.TypeSpecimen
 
equals(Object) - Method in class org.gbif.api.model.checklistbank.VerbatimNameUsage
 
equals(Object) - Method in class org.gbif.api.model.checklistbank.VernacularName
 
equals(Object) - Method in class org.gbif.api.model.collections.Address
 
equals(Object) - Method in class org.gbif.api.model.collections.AlternativeCode
 
equals(Object) - Method in class org.gbif.api.model.collections.CollectionImportParams
 
equals(Object) - Method in class org.gbif.api.model.collections.Contact
 
equals(Object) - Method in class org.gbif.api.model.collections.duplicates.Duplicate
 
equals(Object) - Method in class org.gbif.api.model.collections.InstitutionImportParams
 
equals(Object) - Method in class org.gbif.api.model.collections.lookup.BaseEntityMatched
 
equals(Object) - Method in class org.gbif.api.model.collections.lookup.CollectionMatched
 
equals(Object) - Method in class org.gbif.api.model.collections.lookup.LookupParams
 
equals(Object) - Method in class org.gbif.api.model.collections.lookup.Match
 
equals(Object) - Method in class org.gbif.api.model.collections.MasterSourceMetadata
 
equals(Object) - Method in class org.gbif.api.model.collections.OccurrenceMapping
 
equals(Object) - Method in class org.gbif.api.model.collections.search.CollectionsSearchResponse
 
equals(Object) - Method in class org.gbif.api.model.collections.search.CollectionsSearchResponse.Match
 
equals(Object) - Method in class org.gbif.api.model.collections.SourceableField
 
equals(Object) - Method in class org.gbif.api.model.collections.SourceableField.Source
 
equals(Object) - Method in class org.gbif.api.model.collections.suggestions.BaseChangeSuggestion
 
equals(Object) - Method in class org.gbif.api.model.collections.suggestions.Change
 
equals(Object) - Method in class org.gbif.api.model.collections.suggestions.InstitutionChangeSuggestion
 
equals(Object) - Method in class org.gbif.api.model.collections.UserId
 
equals(Object) - Method in class org.gbif.api.model.common.AbstractGbifUser
 
equals(Object) - Method in class org.gbif.api.model.common.DOI
 
equals(Object) - Method in class org.gbif.api.model.common.DoiData
 
equals(Object) - Method in class org.gbif.api.model.common.GbifUser
 
equals(Object) - Method in class org.gbif.api.model.common.Identifier
 
equals(Object) - Method in class org.gbif.api.model.common.InterpretedField
Deprecated.
 
equals(Object) - Method in class org.gbif.api.model.common.MediaObject
 
equals(Object) - Method in class org.gbif.api.model.common.paging.PageableBase
 
equals(Object) - Method in class org.gbif.api.model.common.paging.PagingResponse
 
equals(Object) - Method in class org.gbif.api.model.common.search.Facet.Count
 
equals(Object) - Method in class org.gbif.api.model.common.search.Facet
 
equals(Object) - Method in class org.gbif.api.model.common.search.SearchResponse
 
equals(Object) - Method in class org.gbif.api.model.common.search.SpellCheckResponse
 
equals(Object) - Method in class org.gbif.api.model.common.search.SpellCheckResponse.Suggestion
 
equals(Object) - Method in class org.gbif.api.model.common.User
Deprecated.
 
equals(Object) - Method in class org.gbif.api.model.crawler.CrawlJob
 
equals(Object) - Method in class org.gbif.api.model.crawler.DatasetProcessStatus
 
equals(Object) - Method in class org.gbif.api.model.crawler.DwcaValidationReport
 
equals(Object) - Method in class org.gbif.api.model.crawler.GenericValidationReport
 
equals(Object) - Method in class org.gbif.api.model.crawler.OccurrenceValidationReport
 
equals(Object) - Method in class org.gbif.api.model.metrics.cube.Dimension
 
equals(Object) - Method in class org.gbif.api.model.metrics.RecordError
Deprecated.
 
equals(Object) - Method in class org.gbif.api.model.occurrence.AgentIdentifier
 
equals(Object) - Method in class org.gbif.api.model.occurrence.DownloadRequest
 
equals(Object) - Method in class org.gbif.api.model.occurrence.DownloadStatistics
 
equals(Object) - Method in class org.gbif.api.model.occurrence.Gadm
 
equals(Object) - Method in class org.gbif.api.model.occurrence.GadmFeature
 
equals(Object) - Method in class org.gbif.api.model.occurrence.geo.DistanceUnit.Distance
 
equals(Object) - Method in class org.gbif.api.model.occurrence.geo.DistanceUnit.GeoDistance
 
equals(Object) - Method in class org.gbif.api.model.occurrence.MeasurementOrFact
 
equals(Object) - Method in class org.gbif.api.model.occurrence.OccurrenceRelation
 
equals(Object) - Method in class org.gbif.api.model.occurrence.PredicateDownloadRequest
 
equals(Object) - Method in class org.gbif.api.model.occurrence.SqlDownloadRequest
 
equals(Object) - Method in class org.gbif.api.model.occurrence.VerbatimOccurrence
 
equals(Object) - Method in class org.gbif.api.model.pipelines.IngestionProcess
 
equals(Object) - Method in class org.gbif.api.model.pipelines.PipelineExecution
 
equals(Object) - Method in class org.gbif.api.model.pipelines.PipelineProcess
 
equals(Object) - Method in class org.gbif.api.model.pipelines.PipelineStep
 
equals(Object) - Method in class org.gbif.api.model.pipelines.PipelineStep.MetricInfo
 
equals(Object) - Method in class org.gbif.api.model.pipelines.RunPipelineResponse
 
equals(Object) - Method in class org.gbif.api.model.pipelines.WorkflowStep
 
equals(Object) - Method in class org.gbif.api.model.pipelines.ws.SearchResult
 
equals(Object) - Method in class org.gbif.api.model.predicate.CompoundPredicate
 
equals(Object) - Method in class org.gbif.api.model.predicate.ConjunctionPredicate
 
equals(Object) - Method in class org.gbif.api.model.predicate.DisjunctionPredicate
 
equals(Object) - Method in class org.gbif.api.model.predicate.FullTextSearchPredicate
 
equals(Object) - Method in class org.gbif.api.model.predicate.GeoDistancePredicate
 
equals(Object) - Method in class org.gbif.api.model.predicate.GreaterThanOrEqualsPredicate
 
equals(Object) - Method in class org.gbif.api.model.predicate.GreaterThanPredicate
 
equals(Object) - Method in class org.gbif.api.model.predicate.InPredicate
 
equals(Object) - Method in class org.gbif.api.model.predicate.IsNotNullPredicate
 
equals(Object) - Method in class org.gbif.api.model.predicate.IsNullPredicate
 
equals(Object) - Method in class org.gbif.api.model.predicate.LessThanOrEqualsPredicate
 
equals(Object) - Method in class org.gbif.api.model.predicate.LessThanPredicate
 
equals(Object) - Method in class org.gbif.api.model.predicate.NotPredicate
 
equals(Object) - Method in class org.gbif.api.model.predicate.SimplePredicate
 
equals(Object) - Method in class org.gbif.api.model.predicate.WithinPredicate
 
equals(Object) - Method in class org.gbif.api.model.registry.Citation
 
equals(Object) - Method in class org.gbif.api.model.registry.CitationContact
 
equals(Object) - Method in class org.gbif.api.model.registry.Comment
 
equals(Object) - Method in class org.gbif.api.model.registry.Contact
 
equals(Object) - Method in class org.gbif.api.model.registry.Dataset
 
equals(Object) - Method in class org.gbif.api.model.registry.eml.Collection
 
equals(Object) - Method in class org.gbif.api.model.registry.eml.curatorial.CuratorialUnit
 
equals(Object) - Method in class org.gbif.api.model.registry.eml.curatorial.CuratorialUnitComposite
 
equals(Object) - Method in class org.gbif.api.model.registry.eml.curatorial.CuratorialUnitCount
 
equals(Object) - Method in class org.gbif.api.model.registry.eml.curatorial.CuratorialUnitRange
 
equals(Object) - Method in class org.gbif.api.model.registry.eml.DataDescription
 
equals(Object) - Method in class org.gbif.api.model.registry.eml.geospatial.GeospatialCoverage
 
equals(Object) - Method in class org.gbif.api.model.registry.eml.KeywordCollection
 
equals(Object) - Method in class org.gbif.api.model.registry.eml.Project
 
equals(Object) - Method in class org.gbif.api.model.registry.eml.SamplingDescription
 
equals(Object) - Method in class org.gbif.api.model.registry.eml.TaxonomicCoverage
 
equals(Object) - Method in class org.gbif.api.model.registry.eml.TaxonomicCoverages
 
equals(Object) - Method in class org.gbif.api.model.registry.eml.temporal.DateRange
 
equals(Object) - Method in class org.gbif.api.model.registry.eml.temporal.SingleDate
 
equals(Object) - Method in class org.gbif.api.model.registry.eml.temporal.VerbatimTimePeriod
 
equals(Object) - Method in class org.gbif.api.model.registry.Endpoint
 
equals(Object) - Method in class org.gbif.api.model.registry.Grid
 
equals(Object) - Method in class org.gbif.api.model.registry.Identifier
 
equals(Object) - Method in class org.gbif.api.model.registry.Installation
 
equals(Object) - Method in class org.gbif.api.model.registry.MachineTag
 
equals(Object) - Method in class org.gbif.api.model.registry.Metadata
 
equals(Object) - Method in class org.gbif.api.model.registry.metasync.MetasyncHistory
 
equals(Object) - Method in class org.gbif.api.model.registry.Network
 
equals(Object) - Method in class org.gbif.api.model.registry.Node
 
equals(Object) - Method in class org.gbif.api.model.registry.Organization
 
equals(Object) - Method in class org.gbif.api.model.registry.search.collections.KeyCodeNameResult
 
equals(Object) - Method in class org.gbif.api.model.registry.search.DatasetSearchResult
 
equals(Object) - Method in class org.gbif.api.model.registry.search.DatasetSuggestResult
 
equals(Object) - Method in class org.gbif.api.model.registry.search.KeyTitleResult
 
equals(Object) - Method in class org.gbif.api.model.registry.Tag
 
equals(Object) - Method in class org.gbif.api.v2.NameUsageMatch2.Diagnostics
 
equals(Object) - Method in class org.gbif.api.v2.NameUsageMatch2
 
equals(Object) - Method in class org.gbif.api.v2.NameUsageMatch2.Nomenclature
 
equals(Object) - Method in class org.gbif.api.v2.RankedName
 
equals(Object) - Method in class org.gbif.dwc.terms.BibTexTerm
 
equals(Object) - Method in class org.gbif.dwc.terms.UnknownTerm
 
EqualsPredicate<S extends SearchParameter> - Class in org.gbif.api.model.predicate
This predicate checks if its key is equal to its value.
EqualsPredicate(S, String, Boolean) - Constructor for class org.gbif.api.model.predicate.EqualsPredicate
 
errorType(ProcessingErrorType) - Method in class org.gbif.api.model.metrics.RecordError.Builder
Deprecated.
 
EstablishmentMeans - Enum in org.gbif.api.vocabulary
Deprecated.
Event - Class in org.gbif.api.model.event
Event class based on https://dwc.tdwg.org/terms/#event.
Event() - Constructor for class org.gbif.api.model.event.Event
 
Event.ParentLineage - Class in org.gbif.api.model.event
 
Event.VocabularyConcept - Class in org.gbif.api.model.event
 
exact(T, Match.Reason...) - Static method in class org.gbif.api.model.collections.lookup.Match
 
exact(T, Set<Match.Reason>) - Static method in class org.gbif.api.model.collections.lookup.Match
 
EXECUTING_STATUSES - Static variable in enum org.gbif.api.model.occurrence.Download.Status
Statuses that represent a download that that hasn't finished.
exists(UUID) - Method in interface org.gbif.api.service.collections.CrudService
Checks if there is an entity with the key received.
Experimental - Annotation Type in org.gbif.api.annotation
Experimental features are available but are not as robustly supported as other features.
explicitMapping(T, Match.Reason...) - Static method in class org.gbif.api.model.collections.lookup.Match
 
explicitMapping(T, Set<Match.Reason>) - Static method in class org.gbif.api.model.collections.lookup.Match
 
ExportFormat - Enum in org.gbif.api.model.common.export
Supported export formats.
ExtendedPrincipal - Interface in org.gbif.api.model.common
Simply an extension of Principal to add the possibility to check roles.
Extension - Enum in org.gbif.api.vocabulary
Enumeration of dwc extensions for both Occurrence and Taxon that are indexed by GBIF.
ExtensionDeserializer - Class in org.gbif.api.jackson
 
ExtensionDeserializer() - Constructor for class org.gbif.api.jackson.ExtensionDeserializer
 
ExtensionKeyDeserializer - Class in org.gbif.api.jackson
Deserializer for Extension in key values.
ExtensionKeyDeserializer() - Constructor for class org.gbif.api.jackson.ExtensionKeyDeserializer
 
ExtensionKeySerializer - Class in org.gbif.api.jackson
 
ExtensionKeySerializer() - Constructor for class org.gbif.api.jackson.ExtensionKeySerializer
 
ExtensionSerializer - Class in org.gbif.api.jackson
 
ExtensionSerializer() - Constructor for class org.gbif.api.jackson.ExtensionSerializer
 

F

Facet<T extends SearchParameter> - Class in org.gbif.api.model.common.search
Represents a clustering of search results into categories.
Facet() - Constructor for class org.gbif.api.model.common.search.Facet
Null/Empty constructor.
Facet(T) - Constructor for class org.gbif.api.model.common.search.Facet
Minimal constructor.
Facet(T, List<Facet.Count>) - Constructor for class org.gbif.api.model.common.search.Facet
Full constructor.
Facet.Count - Class in org.gbif.api.model.common.search
Nested class that represents the count of each category.
FacetedSearchRequest<P extends SearchParameter> - Class in org.gbif.api.model.common.search
Generic request class for search operations requesting facets.
FacetedSearchRequest() - Constructor for class org.gbif.api.model.common.search.FacetedSearchRequest
 
FacetedSearchRequest(Pageable) - Constructor for class org.gbif.api.model.common.search.FacetedSearchRequest
 
FacetedSearchRequest(SearchRequest<P>) - Constructor for class org.gbif.api.model.common.search.FacetedSearchRequest
 
FacetedSearchRequest(long, int) - Constructor for class org.gbif.api.model.common.search.FacetedSearchRequest
 
FacetedSearchRequest.FacetParameters - Annotation Type in org.gbif.api.model.common.search
Annotation to document the facet query parameters.
filter(List<T>, String, String, String) - Static method in class org.gbif.api.util.MachineTagUtils
Returns a copy of the original list of machine taggable entities, that have the machine tag.
findByMasterSource(Source, String) - Method in interface org.gbif.api.service.collections.CollectionEntityService
Finds the collection entity whose master data metadata matches with the parameters received.
findClassTerm(String) - Method in class org.gbif.dwc.terms.TermFactory
This method works just as findTerm(final String termName) but restricts the results to just class terms.
findPropertyTerm(String) - Method in class org.gbif.dwc.terms.TermFactory
This method works just as findTerm(final String termName) but restricts the results to just property terms.
findTerm(String) - Method in class org.gbif.dwc.terms.TermFactory
This is the main method to get a term from the factory searching both for property or class terms.
findTerm(String, boolean) - Method in class org.gbif.dwc.terms.TermFactory
This method works just as findTerm(final String termName) but restricts the results to just property or class terms.
FINISH_STATUSES - Static variable in enum org.gbif.api.model.occurrence.Download.Status
Statuses that represent a download that that has finished.
finishedCrawling(Date) - Method in class org.gbif.api.model.crawler.DatasetProcessStatus.Builder
 
finishReason(FinishReason) - Method in class org.gbif.api.model.crawler.DatasetProcessStatus.Builder
 
FinishReason - Enum in org.gbif.api.model.crawler
This enum lists the reasons why a crawl is finished.
firstTag(MachineTaggable, TagName) - Static method in class org.gbif.api.util.MachineTagUtils
 
firstTag(MachineTaggable, String, String) - Static method in class org.gbif.api.util.MachineTagUtils
 
firstTag(MachineTaggable, TagName, Function<MachineTag, T>) - Static method in class org.gbif.api.util.MachineTagUtils
 
firstTag(MachineTaggable, String, String, Function<MachineTag, T>) - Static method in class org.gbif.api.util.MachineTagUtils
 
FlexibleDateJsonDeserializer() - Constructor for class org.gbif.api.jackson.DateSerde.FlexibleDateJsonDeserializer
 
format(DateRange) - Method in interface org.gbif.api.util.formatter.TemporalCoverageFormatterVisitor
 
format(SingleDate) - Method in interface org.gbif.api.util.formatter.TemporalCoverageFormatterVisitor
 
format(VerbatimTimePeriod) - Method in interface org.gbif.api.util.formatter.TemporalCoverageFormatterVisitor
 
FORMAT_PATTERN - Static variable in class org.gbif.api.util.validators.identifierschemes.ResearcherIdValidator
 
formatContactName(Contact) - Static method in class org.gbif.api.util.ContactAdapter
Format the name of the contact as "FirstName LastName".
fragmentsEmitted(long) - Method in class org.gbif.api.model.crawler.DatasetProcessStatus.Builder
 
fragmentsProcessed(long) - Method in class org.gbif.api.model.crawler.DatasetProcessStatus.Builder
 
fragmentsReceived(long) - Method in class org.gbif.api.model.crawler.DatasetProcessStatus.Builder
 
fromCoreTerm(DwcTerm) - Static method in enum org.gbif.api.model.occurrence.DownloadType
 
fromIsoCode(String) - Static method in enum org.gbif.api.vocabulary.Country
 
fromIsoCode(String) - Static method in enum org.gbif.api.vocabulary.Language
 
fromLicenseUrl(String) - Static method in enum org.gbif.api.vocabulary.License
Lookup a License by either its a) legal code URL or b) human readable summary URL, with HTTP or HTTPS.
fromOccurrence(Occurrence) - Static method in class org.gbif.api.model.event.Event
 
fromResponse(Response<?>) - Method in class org.gbif.api.model.common.messaging.Response.Builder
Creates an builder using/copying a response object.
fromRowType(String) - Static method in enum org.gbif.api.vocabulary.Extension
 
fromString(String) - Static method in enum org.gbif.api.model.common.DoiStatus
 
fromString(String) - Static method in class org.gbif.api.util.DatasetKey
Parses a datasetKey which can be either a compound external key or a simple UUID for registered datasets.
fromString(String) - Static method in class org.gbif.api.util.IsoDateInterval
Parses a well-formatted IsoDateInterval from the text representation.
fromString(String, String) - Static method in class org.gbif.api.util.IsoDateInterval
Parses a well-formatted IsoDateInterval from the text representation.
fromString(String) - Static method in enum org.gbif.api.vocabulary.ContactType
 
fromString(String) - Static method in enum org.gbif.api.vocabulary.Continent
 
fromString(String) - Static method in enum org.gbif.api.vocabulary.DatasetSubtype
 
fromString(String) - Static method in enum org.gbif.api.vocabulary.DatasetType
 
fromString(String) - Static method in enum org.gbif.api.vocabulary.EndpointType
 
fromString(String) - Static method in enum org.gbif.api.vocabulary.GbifRegion
 
fromString(String) - Static method in enum org.gbif.api.vocabulary.IdentifierType
 
fromString(String) - Static method in enum org.gbif.api.vocabulary.InstallationType
 
fromString(String) - Static method in enum org.gbif.api.vocabulary.License
Get an License from its name as String.
fromString(String) - Static method in enum org.gbif.api.vocabulary.MaintenanceUpdateFrequency
 
fromString(String) - Static method in enum org.gbif.api.vocabulary.MetadataType
 
fromString(String) - Static method in enum org.gbif.api.vocabulary.NamePart
Case insensitive lookup of a NamePart by its name that does not throw an exception but returns null for a not found NamePart.
fromString(String) - Static method in enum org.gbif.api.vocabulary.NameType
Case insensitive lookup of a name type by its name that does not throw an exception but returns null for not found name types.
fromString(String) - Static method in enum org.gbif.api.vocabulary.NodeType
 
fromString(String) - Static method in enum org.gbif.api.vocabulary.NomenclaturalStatus
Deprecated.
use NomStatusParser instead
fromString(String) - Static method in enum org.gbif.api.vocabulary.Origin
Case-insensitive lookup of an Origin by its name that does not throw an exception but returns null for not found origins.
fromString(String) - Static method in enum org.gbif.api.vocabulary.ParticipationStatus
 
fullName() - Method in class org.gbif.api.model.checklistbank.ParsedName
 
FullTextSearchPredicate - Class in org.gbif.api.model.predicate
This predicate checks performs a full text search based on a query parameter.
FullTextSearchPredicate(String) - Constructor for class org.gbif.api.model.predicate.FullTextSearchPredicate
 
fuzzy(T, Match.Reason...) - Static method in class org.gbif.api.model.collections.lookup.Match
 
fuzzy(T, Set<Match.Reason>) - Static method in class org.gbif.api.model.collections.lookup.Match
 
fuzzyName(String) - Method in class org.gbif.api.model.collections.request.CollectionSearchRequest.Builder
 
fuzzyName(String) - Method in class org.gbif.api.model.collections.request.InstitutionSearchRequest.Builder
 

G

Gadm - Class in org.gbif.api.model.occurrence
GADM level.
Gadm() - Constructor for class org.gbif.api.model.occurrence.Gadm
 
GadmFeature - Class in org.gbif.api.model.occurrence
A GADM region feature.
GadmFeature() - Constructor for class org.gbif.api.model.occurrence.GadmFeature
 
GadmFeature(String, String) - Constructor for class org.gbif.api.model.occurrence.GadmFeature
 
GadmFeature(String) - Constructor for class org.gbif.api.model.occurrence.GadmFeature
 
GadmTerm - Enum in org.gbif.dwc.terms
 
GBIF_PREFIX - Static variable in class org.gbif.api.model.common.DOI
The DOI prefix registered with DataCite to be used by GBIF-issued production DOIs.
GbifInternalTerm - Enum in org.gbif.dwc.terms
Internal GBIF terms used for processing, fragmenting, crawling, ...
gbifRegion(List<GbifRegion>) - Method in class org.gbif.api.model.collections.request.CollectionSearchRequest.Builder
 
gbifRegion(List<GbifRegion>) - Method in class org.gbif.api.model.collections.request.InstitutionSearchRequest.Builder
 
GbifRegion - Enum in org.gbif.api.vocabulary
An enumeration for all GBIF Regions.
GbifTerm - Enum in org.gbif.dwc.terms
 
GbifUser - Class in org.gbif.api.model.common
A GBIF user account registered in the user Identity database (previously Drupal).
GbifUser() - Constructor for class org.gbif.api.model.common.GbifUser
 
GbifUser(GbifUser) - Constructor for class org.gbif.api.model.common.GbifUser
 
GbifUserPrincipal - Class in org.gbif.api.model.common
A wrapper class for a GBIF User that exposes the unique account name as the principal name.
GbifUserPrincipal(GbifUser) - Constructor for class org.gbif.api.model.common.GbifUserPrincipal
 
generateAuthorsName(List<CitationContact>) - Static method in class org.gbif.api.util.CitationGenerator
Given a list of authors, generates a List of String representing the authors name.
generateCitation(Dataset, Organization) - Static method in class org.gbif.api.util.CitationGenerator
 
generateCitation(Dataset, String) - Static method in class org.gbif.api.util.CitationGenerator
Generate a citation for a Dataset and its Organization.
Generated - Annotation Type in org.gbif.api.annotation
Annotation that marks a method as a 'generated' one.
generatePublisherProvidedCitation(Dataset) - Static method in class org.gbif.api.util.CitationGenerator
Generate a citation for a Dataset using the publisher's provided citation.
GenericValidationReport - Class in org.gbif.api.model.crawler
A container class used to capture the information necessary for a generic validation report.
GenericValidationReport(int, boolean, List<String>, List<Integer>) - Constructor for class org.gbif.api.model.crawler.GenericValidationReport
 
GEO_DATUM - Static variable in class org.gbif.api.model.event.Event
 
GEO_DATUM - Static variable in class org.gbif.api.model.occurrence.Occurrence
 
GeoDistance(double, double, DistanceUnit.Distance) - Constructor for class org.gbif.api.model.occurrence.geo.DistanceUnit.GeoDistance
 
GeoDistancePredicate - Class in org.gbif.api.model.predicate
This predicate checks if an occurrence location falls within a distance of a location.
GeoDistancePredicate(String, String, String) - Constructor for class org.gbif.api.model.predicate.GeoDistancePredicate
Builds a new geodistance predicate that matches records within a given distance of a geopoint..
GeoDistancePredicate(DistanceUnit.GeoDistance) - Constructor for class org.gbif.api.model.predicate.GeoDistancePredicate
 
Geometry - Interface in org.gbif.api.model.registry.eml.geospatial
General interface for all geometries such as polygons or bounding boxes.
GEOSPATIAL_RULES - Static variable in enum org.gbif.api.vocabulary.OccurrenceIssue
All issues that indicate problems with the coordinates and thus should not be shown on maps.
GeospatialCoverage - Class in org.gbif.api.model.registry.eml.geospatial
 
GeospatialCoverage() - Constructor for class org.gbif.api.model.registry.eml.geospatial.GeospatialCoverage
 
GeospatialCoverage(String, BoundingBox) - Constructor for class org.gbif.api.model.registry.eml.geospatial.GeospatialCoverage
 
get(UUID) - Method in interface org.gbif.api.service.checklistbank.DatasetMetricsService
 
get(int) - Method in interface org.gbif.api.service.checklistbank.DescriptionService
Retrieve a description by its key.
get(int, Locale) - Method in interface org.gbif.api.service.checklistbank.NameUsageService
Attempt to find a name usage matching the passed key.
get(int) - Method in interface org.gbif.api.service.checklistbank.ParsedNameService
Retrieves a parsed name by its name key.
get(int) - Method in interface org.gbif.api.service.collections.BatchService
Returns a Batch by its key.
get(UUID) - Method in interface org.gbif.api.service.collections.CrudService
Retrieves an entity by its key.
get(K) - Method in interface org.gbif.api.service.common.CrudService
Get an entity by its unique key.
get(String) - Method in interface org.gbif.api.service.common.IdentityAccessService
Get a GbifUser by identifier (username or email).
get(String) - Method in interface org.gbif.api.service.common.UserService
Deprecated.
Retrieves a user by its case insensitive username.
get(ReadBuilder) - Method in interface org.gbif.api.service.metrics.CubeService
Using the supplied ReadBuilder to obtain the address, looks up the cube value.
get(Long) - Method in interface org.gbif.api.service.occurrence.OccurrenceService
Attempt to find an occurrence matching the passed key.
get(UUID, String) - Method in interface org.gbif.api.service.occurrence.OccurrenceService
Attempt to find an occurrence matching the passed dataset key and occurrenceId.
get(UUID) - Method in interface org.gbif.api.service.registry.NetworkEntityService
Gets an entity by the provided key.
get(String) - Method in interface org.gbif.api.service.registry.OccurrenceDownloadService
Retrieves a occurrence download by its unique key or DOI.
getAbbreviatedLabel() - Method in enum org.gbif.api.vocabulary.NomenclaturalStatus
The abbreviated status name, often used in botany.
getAbbreviatedName() - Method in class org.gbif.api.model.registry.CitationContact
Abbreviated name used for the citation.
getAbbreviation() - Method in class org.gbif.api.model.registry.Dataset
TODO: Document what this is TODO: are both alias & abbreviation needed?
getAbbreviation() - Method in class org.gbif.api.model.registry.Node
 
getAbbreviation() - Method in class org.gbif.api.model.registry.Organization
 
getAbstract() - Method in class org.gbif.api.model.literature.search.LiteratureSearchResult
 
getAbstract() - Method in class org.gbif.api.model.registry.eml.Project
 
getAccepted() - Method in class org.gbif.api.model.checklistbank.NameUsage
 
getAccepted() - Method in class org.gbif.api.model.checklistbank.search.NameUsageSearchResult
 
getAcceptedKey() - Method in class org.gbif.api.model.checklistbank.NameUsage
 
getAcceptedKey() - Method in class org.gbif.api.model.checklistbank.search.NameUsageSearchResult
 
getAcceptedScientificName() - Method in class org.gbif.api.model.occurrence.Occurrence
The accepted scientific name for the acceptedTaxonKey from the GBIF backbone.
getAcceptedTaxonKey() - Method in class org.gbif.api.model.occurrence.Occurrence
The accepted taxon key from the GBIF backbone.
getAcceptedUsage() - Method in class org.gbif.api.v2.NameUsageMatch2
 
getAcceptedUsageKey() - Method in class org.gbif.api.model.checklistbank.NameUsageMatch
The key of the accepted name usage in case the matched usage was a synonym.
getAccessionStatus() - Method in class org.gbif.api.model.collections.Collection
Defines how a collection as been added or joined.
getAccessionStatus() - Method in class org.gbif.api.model.collections.request.CollectionSearchRequest
 
getAccordingTo() - Method in class org.gbif.api.model.checklistbank.NameUsage
The taxon concept reference is usually a reference to some publication or author and year.
getAccordingTo() - Method in class org.gbif.api.model.checklistbank.search.NameUsageSearchResult
 
getAccordingTo() - Method in class org.gbif.api.model.occurrence.OccurrenceRelation
 
getAccuracy() - Method in class org.gbif.api.model.occurrence.MeasurementOrFact
 
getAcronym() - Method in enum org.gbif.api.vocabulary.NomenclaturalCode
 
getActive() - Method in class org.gbif.api.model.collections.request.SearchRequest
 
getAdditionalInfo() - Method in class org.gbif.api.model.registry.Dataset
 
getAdditionalNames() - Method in class org.gbif.api.model.collections.Institution
Alternative names of institution.
getAddress() - Method in class org.gbif.api.model.collections.Address
Textual direction of this address.
getAddress() - Method in class org.gbif.api.model.collections.Collection
Address where this collection is situated.
getAddress() - Method in class org.gbif.api.model.collections.Contact
 
getAddress() - Method in interface org.gbif.api.model.collections.Contactable
Physical or associated address.
getAddress() - Method in class org.gbif.api.model.collections.Institution
 
getAddress() - Method in interface org.gbif.api.model.registry.Address
deliveryPoint in EML
getAddress() - Method in class org.gbif.api.model.registry.Contact
 
getAddress() - Method in class org.gbif.api.model.registry.Network
 
getAddress() - Method in class org.gbif.api.model.registry.Node
 
getAddress() - Method in class org.gbif.api.model.registry.Organization
 
getAdministrativeContact() - Method in class org.gbif.api.util.ContactAdapter
Get the AdministrativeContact Contact.
getAgeInDays() - Method in class org.gbif.api.model.checklistbank.SpeciesProfile
Maximum observed age of an organism given as number of days.
getAlias() - Method in class org.gbif.api.model.registry.Dataset
TODO: Document what this is
getAllInterpretation() - Static method in enum org.gbif.api.model.pipelines.InterpretationType.RecordType
 
getAllInterpretationAsString() - Static method in enum org.gbif.api.model.pipelines.InterpretationType.RecordType
 
getAllNodes() - Method in class org.gbif.api.model.pipelines.PipelinesWorkflow.Graph
 
getAllNodesFor(Set<T>) - Method in class org.gbif.api.model.pipelines.PipelinesWorkflow.Graph
 
getAllSteps() - Method in class org.gbif.api.model.pipelines.WorkflowStep
 
getAllTables() - Static method in enum org.gbif.api.model.pipelines.InterpretationType.RecordType
 
getAllType(ContactType) - Method in class org.gbif.api.util.ContactAdapter
Get all Contact for the provided type.
getAllValidatorInterpretationAsString() - Static method in enum org.gbif.api.model.pipelines.InterpretationType.RecordType
 
getAlternativeCode() - Method in class org.gbif.api.model.collections.request.SearchRequest
 
getAlternativeCodes() - Method in class org.gbif.api.model.collections.Collection
Alternative codes for a collection.
getAlternativeCodes() - Method in interface org.gbif.api.model.collections.CollectionEntity
Alternative codes of the entity
getAlternativeCodes() - Method in class org.gbif.api.model.collections.Institution
Alternative codes for an institution.
getAlternativeMatches() - Method in class org.gbif.api.model.collections.lookup.LookupResult
 
getAlternatives() - Method in class org.gbif.api.model.checklistbank.NameUsageMatch
 
getAlternatives() - Method in class org.gbif.api.model.common.search.SpellCheckResponse.Suggestion
 
getAlternatives() - Method in class org.gbif.api.v2.NameUsageMatch2.Diagnostics
 
getApiUrl() - Method in class org.gbif.api.model.collections.Collection
Machine consumable endpoint of information about a collection.
getApiUrl() - Method in class org.gbif.api.model.collections.Institution
Machine-consumable endpoint of an institution and probably its collections.
getAppendixCites() - Method in class org.gbif.api.model.checklistbank.Distribution
The CITES (Convention on International Trade in Endangered Species of Wild Fauna and Flora) Appendix number under which the taxon is listed.
getApplied() - Method in class org.gbif.api.model.collections.suggestions.BaseChangeSuggestion
 
getApplied() - Method in interface org.gbif.api.model.collections.suggestions.ChangeSuggestion
 
getAppliedBy() - Method in class org.gbif.api.model.collections.suggestions.BaseChangeSuggestion
 
getAppliedBy() - Method in interface org.gbif.api.model.collections.suggestions.ChangeSuggestion
 
getArea() - Method in class org.gbif.api.model.checklistbank.VernacularName
The area for the vernacular name.
getAssociatedParties() - Method in class org.gbif.api.util.ContactAdapter
Get the list of AssociatedParties.
getAssociatedSequences() - Method in class org.gbif.api.model.occurrence.Occurrence
A list (concatenated and separated) of identifiers (publication, global unique identifier, URI) of genetic sequence information associated with the material entity.
getAttempt() - Method in class org.gbif.api.model.crawler.CrawlJob
 
getAttempt() - Method in class org.gbif.api.model.pipelines.IngestionProcess
 
getAttempt() - Method in class org.gbif.api.model.pipelines.PipelineProcess
 
getAttempt() - Method in class org.gbif.api.model.pipelines.ws.PipelineProcessParameters
 
getAttempt() - Method in class org.gbif.api.model.pipelines.ws.SearchResult
 
getAudience() - Method in class org.gbif.api.model.common.MediaObject
 
getAuthor() - Method in class org.gbif.api.model.checklistbank.Reference
Deprecated.
getAuthor() - Method in class org.gbif.api.model.collections.suggestions.Change
 
getAuthorName(Contact) - Static method in class org.gbif.api.util.CitationGenerator
Given a Contact, generates a String for that contact for citation purpose.
getAuthors(Dataset) - Static method in class org.gbif.api.util.CitationGenerator
 
getAuthors(List<Contact>) - Static method in class org.gbif.api.util.CitationGenerator
Extracts an ordered list of unique authors from a list of contacts.
getAuthorsForCamtrap(List<Contact>) - Static method in class org.gbif.api.util.CitationGenerator
 
getAuthorship() - Method in class org.gbif.api.model.checklistbank.NameUsage
Returns the authorship information for the scientific name.
getAuthorship() - Method in class org.gbif.api.model.checklistbank.ParsedName
The original author of this name, e.g.
getAuthorship() - Method in class org.gbif.api.model.checklistbank.search.NameUsageSearchResult
 
getBasionym() - Method in class org.gbif.api.model.checklistbank.NameUsage
 
getBasionym() - Method in class org.gbif.api.model.checklistbank.search.NameUsageSearchResult
 
getBasionymKey() - Method in class org.gbif.api.model.checklistbank.NameUsage
Returns the earlier name (basionym) for this scientific name.
getBasionymKey() - Method in class org.gbif.api.model.checklistbank.search.NameUsageSearchResult
 
getBasisOfRecord() - Method in class org.gbif.api.model.occurrence.Occurrence
 
getBasisOfRecordCounts() - Method in interface org.gbif.api.service.occurrence.OccurrenceDistributionIndexService
Returns the occurrence records count by basis of record.
getBed() - Method in class org.gbif.api.model.occurrence.Occurrence
 
getBibliographicCitations() - Method in class org.gbif.api.model.registry.Dataset
 
getBoundingBox() - Method in class org.gbif.api.model.registry.eml.geospatial.GeospatialCoverage
 
getBracketAuthorship() - Method in class org.gbif.api.model.checklistbank.ParsedName
The authorship of the original name, i.e.
getBracketYear() - Method in class org.gbif.api.model.checklistbank.ParsedName
The code relevant year of publication of the original name, i.e.
getBracketYearInt() - Method in class org.gbif.api.model.checklistbank.ParsedName
 
getByCountry(Country) - Method in interface org.gbif.api.service.registry.NodeService
Returns a node for a given country.
getBySession(String) - Method in interface org.gbif.api.service.common.UserService
Deprecated.
Retrieves a user by a currently open Drupal (login) session.
getCanonicalName() - Method in class org.gbif.api.model.checklistbank.NameUsage
 
getCanonicalName() - Method in class org.gbif.api.model.checklistbank.NameUsageMatch
 
getCanonicalName() - Method in class org.gbif.api.model.checklistbank.search.NameUsageSearchResult
 
getCanonicalName() - Method in class org.gbif.api.model.checklistbank.search.NameUsageSuggestResult
 
getCanonicalOrScientificName() - Method in class org.gbif.api.model.checklistbank.NameUsage
 
getCatalogNumber() - Method in class org.gbif.api.model.checklistbank.TypeSpecimen
Deprecated.
getCatalogNumber() - Method in class org.gbif.api.model.metrics.RecordError
Deprecated.
 
getCatalogUrl() - Method in class org.gbif.api.model.collections.Collection
URI that exposes data about the catalog associated to a collection.
getCatalogUrl() - Method in class org.gbif.api.model.collections.Institution
URL to the main catalogue of an institution.
getChanges() - Method in class org.gbif.api.model.collections.suggestions.BaseChangeSuggestion
 
getChanges() - Method in interface org.gbif.api.model.collections.suggestions.ChangeSuggestion
 
getChangeSuggestion(int) - Method in interface org.gbif.api.service.collections.ChangeSuggestionService
 
getCharset() - Method in class org.gbif.api.model.registry.eml.DataDescription
The name of the character encoding.
getCheckedRecords() - Method in class org.gbif.api.model.crawler.GenericValidationReport
 
getCheckedRecords() - Method in class org.gbif.api.model.crawler.OccurrenceValidationReport
 
getCitation() - Method in class org.gbif.api.model.checklistbank.Reference
A text string referring to an un-parsed bibliographic citation.
getCitation() - Method in class org.gbif.api.model.checklistbank.TypeSpecimen
Deprecated.
getCitation() - Method in class org.gbif.api.model.registry.Dataset
The exact form of how to cite this dataset.
getCitation(String) - Method in interface org.gbif.api.service.registry.OccurrenceDownloadService
Retrieve citation details of a download by its unique key or DOI.
getCitesPermitNumber() - Method in class org.gbif.api.model.collections.Institution
CITES (see http://ec.europa.eu/environment/cites/info_permits_en.htm) licence given for this collection.
getCity() - Method in class org.gbif.api.model.collections.Address
City where this address is located.
getCity() - Method in class org.gbif.api.model.collections.Collection
 
getCity() - Method in class org.gbif.api.model.collections.Contact
 
getCity() - Method in class org.gbif.api.model.collections.Institution
 
getCity() - Method in class org.gbif.api.model.collections.request.SearchRequest
 
getCity() - Method in interface org.gbif.api.model.registry.Address
city in EML
getCity() - Method in class org.gbif.api.model.registry.Contact
 
getCity() - Method in class org.gbif.api.model.registry.Network
 
getCity() - Method in class org.gbif.api.model.registry.Node
 
getCity() - Method in class org.gbif.api.model.registry.Organization
 
getClassification() - Method in class org.gbif.api.v2.NameUsageMatch2
the classification includes the accepted taxon concept view
getClassKey() - Method in class org.gbif.api.model.checklistbank.NameUsage
 
getClassKey() - Method in class org.gbif.api.model.checklistbank.NameUsageMatch
 
getClassKey() - Method in class org.gbif.api.model.checklistbank.search.NameUsageSearchResult
 
getClassKey() - Method in class org.gbif.api.model.checklistbank.search.NameUsageSuggestResult
 
getClassKey() - Method in interface org.gbif.api.model.common.LinneanClassificationKeys
Return the class key for this usage.
getClassKey() - Method in class org.gbif.api.model.occurrence.Occurrence
 
getClazz() - Method in class org.gbif.api.model.checklistbank.NameUsage
 
getClazz() - Method in class org.gbif.api.model.checklistbank.NameUsageMatch
 
getClazz() - Method in class org.gbif.api.model.checklistbank.search.NameUsageSearchResult
 
getClazz() - Method in class org.gbif.api.model.checklistbank.search.NameUsageSuggestResult
 
getClazz() - Method in interface org.gbif.api.model.common.LinneanClassification
Return the class for this usage.
getClazz() - Method in class org.gbif.api.model.occurrence.Occurrence
 
getCode() - Method in class org.gbif.api.model.ChallengeCode
 
getCode() - Method in class org.gbif.api.model.collections.AlternativeCode
 
getCode() - Method in class org.gbif.api.model.collections.Collection
Collection code: identifies a collection at the owner's location.
getCode() - Method in interface org.gbif.api.model.collections.CollectionEntity
Identifies an entity at the owner's location.
getCode() - Method in class org.gbif.api.model.collections.duplicates.Duplicate
 
getCode() - Method in class org.gbif.api.model.collections.Institution
Code used to identify the collection.
getCode() - Method in class org.gbif.api.model.collections.lookup.BaseEntityMatched
 
getCode() - Method in interface org.gbif.api.model.collections.lookup.EntityMatched
 
getCode() - Method in class org.gbif.api.model.collections.OccurrenceMapping
 
getCode() - Method in class org.gbif.api.model.collections.request.SearchRequest
 
getCode() - Method in class org.gbif.api.model.collections.search.CollectionsSearchResponse
 
getCode() - Method in enum org.gbif.api.model.common.messaging.Response.StatusCode
 
getCode() - Method in class org.gbif.api.model.registry.search.collections.KeyCodeNameResult
 
getCode() - Method in enum org.gbif.api.vocabulary.ThreatStatus
 
getColCoveragePct() - Method in class org.gbif.api.model.checklistbank.DatasetMetrics
 
getCollection() - Method in class org.gbif.api.model.collections.view.CollectionView
 
getCollectionCode() - Method in class org.gbif.api.model.checklistbank.TypeSpecimen
Deprecated.
getCollectionCode() - Method in class org.gbif.api.model.collections.CollectionImportParams
 
getCollectionCode() - Method in class org.gbif.api.model.collections.lookup.LookupParams
 
getCollectionCode() - Method in class org.gbif.api.model.metrics.RecordError
Deprecated.
 
getCollectionId() - Method in class org.gbif.api.model.collections.lookup.LookupParams
 
getCollectionKey() - Method in class org.gbif.api.model.occurrence.Occurrence
 
getCollectionMatch() - Method in class org.gbif.api.model.collections.lookup.LookupResult
 
getCollectionMatches() - Method in class org.gbif.api.model.collections.lookup.AlternativeMatches
 
getCollections() - Method in class org.gbif.api.model.registry.Dataset
 
getCollectionSummary() - Method in class org.gbif.api.model.collections.Collection
 
getCollectionView(UUID) - Method in interface org.gbif.api.service.collections.CollectionService
Retrieves a CollectionView by the collection key.
getColMatchingCount() - Method in class org.gbif.api.model.checklistbank.DatasetMetrics
 
getCombinations() - Method in class org.gbif.api.model.checklistbank.NameUsageContainer
 
getComments() - Method in class org.gbif.api.model.collections.Collection
 
getComments() - Method in class org.gbif.api.model.collections.Institution
 
getComments() - Method in class org.gbif.api.model.collections.suggestions.BaseChangeSuggestion
 
getComments() - Method in interface org.gbif.api.model.collections.suggestions.ChangeSuggestion
 
getComments() - Method in interface org.gbif.api.model.registry.Commentable
 
getComments() - Method in class org.gbif.api.model.registry.Dataset
 
getComments() - Method in class org.gbif.api.model.registry.Installation
 
getComments() - Method in class org.gbif.api.model.registry.Network
 
getComments() - Method in class org.gbif.api.model.registry.Node
 
getComments() - Method in class org.gbif.api.model.registry.Organization
 
getCommonName() - Method in class org.gbif.api.model.registry.eml.TaxonomicCoverage
 
getConfidence() - Method in class org.gbif.api.model.checklistbank.NameUsageMatch
The confidence that the lookup was correct.
getConfidence() - Method in class org.gbif.api.v2.NameUsageMatch2.Diagnostics
 
getConfirmationKey() - Method in class org.gbif.api.model.registry.ConfirmationKeyParameter
 
getConstituentKey() - Method in class org.gbif.api.model.checklistbank.NameUsage
Return the optional sub dataset key for this usage.
getConstituentKey() - Method in class org.gbif.api.model.checklistbank.search.NameUsageSearchResult
 
getContact() - Method in class org.gbif.api.model.collections.request.SearchRequest
 
getContactPersons() - Method in class org.gbif.api.model.collections.Collection
 
getContactPersons() - Method in interface org.gbif.api.model.collections.Contactable
List of associated contacts.
getContactPersons() - Method in class org.gbif.api.model.collections.Institution
 
getContacts() - Method in interface org.gbif.api.model.registry.Contactable
 
getContacts() - Method in class org.gbif.api.model.registry.Dataset
 
getContacts() - Method in class org.gbif.api.model.registry.eml.Project
 
getContacts() - Method in class org.gbif.api.model.registry.Installation
 
getContacts() - Method in class org.gbif.api.model.registry.Network
 
getContacts() - Method in class org.gbif.api.model.registry.Node
 
getContacts() - Method in class org.gbif.api.model.registry.Organization
 
getContacts() - Method in class org.gbif.api.util.ContactAdapter
Get the list of Contact of type ContactType.ADMINISTRATIVE_POINT_OF_CONTACT.
getContactsCitation() - Method in class org.gbif.api.model.registry.Dataset
A generated list of contacts used in the citation text when it is generated by the GBIF API.
getContent() - Method in class org.gbif.api.model.common.messaging.Request
 
getContent() - Method in class org.gbif.api.model.common.messaging.Response
 
getContent() - Method in class org.gbif.api.model.registry.Comment
 
getContent() - Method in class org.gbif.api.model.registry.Metadata
 
getContentTypes() - Method in class org.gbif.api.model.collections.Collection
Content type of the elements found in a collection.
getContentTypes() - Method in class org.gbif.api.model.collections.request.CollectionSearchRequest
 
getContext() - Method in class org.gbif.api.model.common.messaging.Request
Context contains additional request parameters.
getContinent() - Method in class org.gbif.api.model.occurrence.Occurrence
 
getContinent() - Method in class org.gbif.api.model.registry.Node
 
getContinent() - Method in class org.gbif.api.model.registry.search.DatasetSearchResult
Currently not populated.
getContributor() - Method in class org.gbif.api.model.checklistbank.Description
An entity responsible for making contributions to the textual information provided for a description.
getContributor() - Method in class org.gbif.api.model.common.MediaObject
 
getConvertedToCollection() - Method in class org.gbif.api.model.collections.Institution
 
getCoordinateAccuracy() - Method in class org.gbif.api.model.occurrence.Occurrence
Deprecated.
to be removed in the public v2 of the API (see POR-3061) The uncertainty for latitude in decimal degrees. Note that the longitude degrees have a different accuracy in degrees which changes with latitude and is largest at the poles.
getCoordinatePrecision() - Method in class org.gbif.api.model.occurrence.Occurrence
 
getCoordinateUncertaintyInMeters() - Method in class org.gbif.api.model.occurrence.Occurrence
The uncertainty radius for lat/lon in meters.
getCoreField(Term) - Method in class org.gbif.api.model.checklistbank.VerbatimNameUsage
Get the value of a specific field (Term).
getCoreTerm() - Method in enum org.gbif.api.model.occurrence.DownloadType
 
getCount() - Method in class org.gbif.api.model.common.paging.PagingResponse
Gets the count of total results of search operation.
getCount() - Method in class org.gbif.api.model.common.search.Facet.Count
Number of occurrences of the category(name).
getCount() - Method in class org.gbif.api.model.registry.eml.curatorial.CuratorialUnitComposite
 
getCount() - Method in class org.gbif.api.model.registry.eml.curatorial.CuratorialUnitCount
 
getCountByConstituent() - Method in class org.gbif.api.model.checklistbank.DatasetMetrics
 
getCountByIssue() - Method in class org.gbif.api.model.checklistbank.DatasetMetrics
 
getCountByIssue(NameUsageIssue) - Method in class org.gbif.api.model.checklistbank.DatasetMetrics
Get the metrics by name usage issue.
getCountByKingdom() - Method in class org.gbif.api.model.checklistbank.DatasetMetrics
 
getCountByKingdom(Kingdom) - Method in class org.gbif.api.model.checklistbank.DatasetMetrics
For an occurrence dataset get the number of records that are interpreted to belong to a certain nub kingdom.
getCountByOrigin() - Method in class org.gbif.api.model.checklistbank.DatasetMetrics
 
getCountByOrigin(Origin) - Method in class org.gbif.api.model.checklistbank.DatasetMetrics
Get the metrics by name usage origin.
getCountByRank() - Method in class org.gbif.api.model.checklistbank.DatasetMetrics
 
getCountByRank(Rank) - Method in class org.gbif.api.model.checklistbank.DatasetMetrics
Get the metrics by taxonomic rank, i.e.
getCountExtRecordsByExtension() - Method in class org.gbif.api.model.checklistbank.DatasetMetrics
 
getCountNamesByLanguage() - Method in class org.gbif.api.model.checklistbank.DatasetMetrics
 
getCountNamesByLanguage(Language) - Method in class org.gbif.api.model.checklistbank.DatasetMetrics
Number of vernacular names in this checklist dataset by language.
getCountry() - Method in class org.gbif.api.model.checklistbank.Distribution
 
getCountry() - Method in class org.gbif.api.model.checklistbank.VernacularName
The country in which the vernacular name is used.
getCountry() - Method in class org.gbif.api.model.collections.Address
Country where this address is located.
getCountry() - Method in class org.gbif.api.model.collections.Collection
 
getCountry() - Method in class org.gbif.api.model.collections.Contact
 
getCountry() - Method in class org.gbif.api.model.collections.Institution
 
getCountry() - Method in class org.gbif.api.model.collections.lookup.LookupParams
 
getCountry() - Method in class org.gbif.api.model.collections.request.SearchRequest
 
getCountry() - Method in class org.gbif.api.model.collections.search.CollectionsSearchResponse
 
getCountry() - Method in class org.gbif.api.model.occurrence.Occurrence
 
getCountry() - Method in interface org.gbif.api.model.registry.Address
country in EML
getCountry() - Method in class org.gbif.api.model.registry.Contact
 
getCountry() - Method in class org.gbif.api.model.registry.Network
 
getCountry() - Method in class org.gbif.api.model.registry.Node
 
getCountry() - Method in class org.gbif.api.model.registry.Organization
 
getCountryCoverage() - Method in class org.gbif.api.model.registry.Dataset
 
getCountryCoverage() - Method in class org.gbif.api.model.registry.search.DatasetSearchResult
Currently not populated.
getCounts() - Method in class org.gbif.api.model.common.search.Facet
List of the different categories/count for this facet.
getCoverages() - Method in class org.gbif.api.model.registry.eml.TaxonomicCoverages
 
getCrawlContext() - Method in class org.gbif.api.model.crawler.DatasetProcessStatus
Last successful crawl context, this is a JSON string.
getCrawlId() - Method in class org.gbif.api.model.occurrence.VerbatimOccurrence
Crawling attempt id.
getCrawlInfo() - Method in class org.gbif.api.model.pipelines.IngestionProcess
 
getCrawlJob() - Method in class org.gbif.api.model.crawler.DatasetProcessStatus
 
getCreated() - Method in class org.gbif.api.model.checklistbank.DatasetMetrics
 
getCreated() - Method in class org.gbif.api.model.collections.Collection
 
getCreated() - Method in interface org.gbif.api.model.collections.CollectionEntity
Date when the records as created.
getCreated() - Method in class org.gbif.api.model.collections.Contact
 
getCreated() - Method in class org.gbif.api.model.collections.Institution
 
getCreated() - Method in class org.gbif.api.model.collections.MasterSourceMetadata
 
getCreated() - Method in class org.gbif.api.model.collections.OccurrenceMapping
 
getCreated() - Method in class org.gbif.api.model.collections.suggestions.Change
 
getCreated() - Method in class org.gbif.api.model.common.MediaObject
The date and time this media item was taken.
getCreated() - Method in class org.gbif.api.model.occurrence.Download
 
getCreated() - Method in class org.gbif.api.model.pipelines.PipelineExecution
 
getCreated() - Method in class org.gbif.api.model.pipelines.PipelineProcess
 
getCreated() - Method in class org.gbif.api.model.registry.Comment
 
getCreated() - Method in class org.gbif.api.model.registry.Contact
 
getCreated() - Method in class org.gbif.api.model.registry.Dataset
 
getCreated() - Method in class org.gbif.api.model.registry.Endpoint
 
getCreated() - Method in class org.gbif.api.model.registry.Identifier
 
getCreated() - Method in class org.gbif.api.model.registry.Installation
 
getCreated() - Method in class org.gbif.api.model.registry.MachineTag
 
getCreated() - Method in class org.gbif.api.model.registry.Metadata
 
getCreated() - Method in class org.gbif.api.model.registry.Network
 
getCreated() - Method in interface org.gbif.api.model.registry.NetworkEntity
 
getCreated() - Method in class org.gbif.api.model.registry.Node
 
getCreated() - Method in class org.gbif.api.model.registry.Organization
 
getCreated() - Method in class org.gbif.api.model.registry.Tag
 
getCreatedBy() - Method in class org.gbif.api.model.collections.Collection
 
getCreatedBy() - Method in interface org.gbif.api.model.collections.CollectionEntity
Creator of the database record.
getCreatedBy() - Method in class org.gbif.api.model.collections.Contact
 
getCreatedBy() - Method in class org.gbif.api.model.collections.Institution
 
getCreatedBy() - Method in class org.gbif.api.model.collections.MasterSourceMetadata
 
getCreatedBy() - Method in class org.gbif.api.model.collections.OccurrenceMapping
 
getCreatedBy() - Method in class org.gbif.api.model.pipelines.PipelineExecution
 
getCreatedBy() - Method in class org.gbif.api.model.pipelines.PipelineProcess
 
getCreatedBy() - Method in class org.gbif.api.model.pipelines.PipelineStep
 
getCreatedBy() - Method in class org.gbif.api.model.registry.Comment
 
getCreatedBy() - Method in class org.gbif.api.model.registry.Contact
 
getCreatedBy() - Method in class org.gbif.api.model.registry.Dataset
 
getCreatedBy() - Method in class org.gbif.api.model.registry.Endpoint
 
getCreatedBy() - Method in class org.gbif.api.model.registry.Identifier
 
getCreatedBy() - Method in class org.gbif.api.model.registry.Installation
 
getCreatedBy() - Method in class org.gbif.api.model.registry.MachineTag
 
getCreatedBy() - Method in class org.gbif.api.model.registry.Metadata
 
getCreatedBy() - Method in class org.gbif.api.model.registry.Network
 
getCreatedBy() - Method in interface org.gbif.api.model.registry.NetworkEntity
 
getCreatedBy() - Method in class org.gbif.api.model.registry.Node
 
getCreatedBy() - Method in class org.gbif.api.model.registry.Organization
 
getCreatedBy() - Method in class org.gbif.api.model.registry.Tag
 
getCreator() - Method in class org.gbif.api.model.checklistbank.Description
The author(s) of the textual information provided for a description.
getCreator() - Method in class org.gbif.api.model.common.MediaObject
The person that created the media item.
getCreator() - Method in class org.gbif.api.model.occurrence.DownloadRequest
 
getCreators() - Method in class org.gbif.api.util.ContactAdapter
Get the list of Contact of type ContactType.ORIGINATOR.
getCultivarEpithet() - Method in class org.gbif.api.model.checklistbank.ParsedName
The cultivar, cultivar group or grex part of a cultivated plant name.
getCuratorialUnits() - Method in class org.gbif.api.model.registry.Dataset
 
getCuratorialUnits() - Method in class org.gbif.api.model.registry.eml.Collection
The quantitative descriptor (number of specimens, samples or batches).
getData() - Method in class org.gbif.api.model.ChallengeCode
 
getDataDescriptions() - Method in class org.gbif.api.model.registry.Dataset
 
getDataLanguage() - Method in class org.gbif.api.model.registry.Dataset
 
getDatasetCitation() - Method in class org.gbif.api.model.registry.DatasetOccurrenceDownloadUsage
Dataset citation at the moment when the download was created.
getDatasetDOI() - Method in class org.gbif.api.model.registry.DatasetOccurrenceDownloadUsage
Dataset DOI at the moment when the download was created.
getDatasetID() - Method in class org.gbif.api.model.occurrence.Occurrence
 
getDatasetId() - Method in class org.gbif.api.util.DatasetKey
 
getDatasetKey() - Method in class org.gbif.api.model.checklistbank.DatasetMetrics
 
getDatasetKey() - Method in class org.gbif.api.model.checklistbank.NameUsage
Returns the key of the checklist that "hosts" this name usage.
getDatasetKey() - Method in class org.gbif.api.model.checklistbank.search.NameUsageSearchResult
 
getDatasetKey() - Method in class org.gbif.api.model.collections.CollectionImportParams
 
getDatasetKey() - Method in class org.gbif.api.model.collections.lookup.LookupParams
 
getDatasetKey() - Method in class org.gbif.api.model.collections.OccurrenceMapping
 
getDatasetKey() - Method in class org.gbif.api.model.crawler.CrawlJob
 
getDatasetKey() - Method in class org.gbif.api.model.crawler.DatasetProcessStatus
Key that identifies the Dataset.
getDatasetKey() - Method in class org.gbif.api.model.crawler.DwcaValidationReport
 
getDatasetKey() - Method in class org.gbif.api.model.occurrence.DownloadStatistics
 
getDatasetKey() - Method in class org.gbif.api.model.occurrence.VerbatimOccurrence
 
getDatasetKey() - Method in class org.gbif.api.model.pipelines.IngestionProcess
 
getDatasetKey() - Method in class org.gbif.api.model.pipelines.PipelineProcess
 
getDatasetKey() - Method in class org.gbif.api.model.pipelines.ws.PipelineProcessParameters
 
getDatasetKey() - Method in class org.gbif.api.model.pipelines.ws.SearchResult
 
getDatasetKey() - Method in class org.gbif.api.model.registry.DatasetOccurrenceDownloadUsage
Dataset key.
getDatasetKey() - Method in class org.gbif.api.model.registry.Metadata
 
getDatasetName() - Method in class org.gbif.api.model.occurrence.Occurrence
 
getDatasetProcessStatus(UUID) - Method in interface org.gbif.api.service.crawler.DatasetProcessService
Returns the processing status for a particular dataset identified by a UUID key.
getDatasetProcessStatus(UUID, int) - Method in interface org.gbif.api.service.registry.DatasetProcessStatusService
Retrieves a DatasetProcessStatus by its datasetKey and attempt.
getDatasetsToExclude() - Method in class org.gbif.api.model.pipelines.ws.RunAllParams
 
getDatasetsToInclude() - Method in class org.gbif.api.model.pipelines.ws.RunAllParams
 
getDatasetTitle() - Method in class org.gbif.api.model.pipelines.IngestionProcess
 
getDatasetTitle() - Method in class org.gbif.api.model.pipelines.PipelineProcess
 
getDatasetTitle() - Method in class org.gbif.api.model.registry.DatasetOccurrenceDownloadUsage
Dataset title at the moment when the download was created.
getDate() - Method in class org.gbif.api.model.checklistbank.Reference
Deprecated.
getDate() - Method in class org.gbif.api.model.registry.eml.temporal.SingleDate
 
getDateIdentified() - Method in class org.gbif.api.model.occurrence.Occurrence
 
getDateIdentified() - Method in interface org.gbif.api.ws.mixin.OccurrenceMixin
 
getDateSignedMOU() - Method in class org.gbif.api.model.registry.Node
 
getDay() - Method in class org.gbif.api.model.occurrence.Occurrence
The day of the month of the event date.
getDecades() - Method in class org.gbif.api.model.registry.search.DatasetSearchResult
 
getDecimalLatitude() - Method in class org.gbif.api.model.occurrence.Occurrence
 
getDecimalLongitude() - Method in class org.gbif.api.model.occurrence.Occurrence
The decimalLongitude in decimal degrees always for the WGS84 datum.
getDeclaredCount() - Method in class org.gbif.api.model.crawler.DatasetProcessStatus
 
getDegreeOfEstablishment() - Method in class org.gbif.api.model.occurrence.Occurrence
 
getDeleted() - Method in class org.gbif.api.model.checklistbank.NameUsage
The date this record was deleted.
getDeleted() - Method in class org.gbif.api.model.collections.Collection
 
getDeleted() - Method in interface org.gbif.api.model.collections.CollectionEntity
Date when the records was (logically) deleted.
getDeleted() - Method in class org.gbif.api.model.collections.Institution
 
getDeleted() - Method in class org.gbif.api.model.common.AbstractGbifUser
 
getDeleted() - Method in class org.gbif.api.model.registry.Dataset
 
getDeleted() - Method in class org.gbif.api.model.registry.Installation
 
getDeleted() - Method in class org.gbif.api.model.registry.Network
 
getDeleted() - Method in interface org.gbif.api.model.registry.NetworkEntity
 
getDeleted() - Method in class org.gbif.api.model.registry.Node
 
getDeleted() - Method in class org.gbif.api.model.registry.Organization
 
getDelimiter() - Method in enum org.gbif.api.model.common.export.ExportFormat
 
getDepartment() - Method in class org.gbif.api.model.collections.Collection
 
getDepth() - Method in class org.gbif.api.model.occurrence.Occurrence
Depth in meters below the surface.
getDepthAccuracy() - Method in class org.gbif.api.model.occurrence.Occurrence
Depth accuracy is the uncertainty for the depth in meters.
getDescription() - Method in class org.gbif.api.model.checklistbank.Description
Any descriptive free text matching the category given as dc:type.
getDescription() - Method in class org.gbif.api.model.collections.AlternativeCode
 
getDescription() - Method in class org.gbif.api.model.collections.Collection
Textual description/summary of the contents of a collection.
getDescription() - Method in interface org.gbif.api.model.collections.CollectionEntity
Textual description/summary of the contents of an entity.
getDescription() - Method in class org.gbif.api.model.collections.Institution
Textual description of institution.
getDescription() - Method in class org.gbif.api.model.common.MediaObject
A longer description for this media item.
getDescription() - Method in class org.gbif.api.model.registry.Contact
 
getDescription() - Method in class org.gbif.api.model.registry.Dataset
 
getDescription() - Method in class org.gbif.api.model.registry.eml.geospatial.GeospatialCoverage
 
getDescription() - Method in class org.gbif.api.model.registry.eml.Project
 
getDescription() - Method in class org.gbif.api.model.registry.eml.TaxonomicCoverages
 
getDescription() - Method in class org.gbif.api.model.registry.Endpoint
 
getDescription() - Method in class org.gbif.api.model.registry.Installation
 
getDescription() - Method in class org.gbif.api.model.registry.Network
 
getDescription() - Method in interface org.gbif.api.model.registry.NetworkEntity
 
getDescription() - Method in class org.gbif.api.model.registry.Node
 
getDescription() - Method in class org.gbif.api.model.registry.Organization
 
getDescription() - Method in class org.gbif.api.model.registry.search.DatasetSearchResult
 
getDescription() - Method in class org.gbif.api.model.registry.search.DatasetSuggestResult
 
getDescription() - Method in enum org.gbif.api.vocabulary.collections.CollectionContentType
 
getDescription() - Method in enum org.gbif.api.vocabulary.collections.Discipline
 
getDescription() - Method in enum org.gbif.api.vocabulary.collections.PreservationType
 
getDescriptions() - Method in class org.gbif.api.model.checklistbank.NameUsageContainer
 
getDescriptions() - Method in class org.gbif.api.model.checklistbank.search.NameUsageSearchResult
 
getDesignDescription() - Method in class org.gbif.api.model.registry.eml.Project
 
getDetails() - Method in class org.gbif.api.model.registry.metasync.MetasyncHistory
Details about the metasync operation.
getDeterminedBy() - Method in class org.gbif.api.model.occurrence.MeasurementOrFact
 
getDeterminedDate() - Method in class org.gbif.api.model.occurrence.MeasurementOrFact
 
getDeviation() - Method in class org.gbif.api.model.registry.eml.curatorial.CuratorialUnitComposite
 
getDeviation() - Method in class org.gbif.api.model.registry.eml.curatorial.CuratorialUnitCount
 
getDiagnostics() - Method in class org.gbif.api.v2.NameUsageMatch2
 
getDimensions() - Method in class org.gbif.api.model.metrics.cube.Rollup
 
getDiscarded() - Method in class org.gbif.api.model.collections.suggestions.BaseChangeSuggestion
 
getDiscarded() - Method in interface org.gbif.api.model.collections.suggestions.ChangeSuggestion
 
getDiscardedBy() - Method in class org.gbif.api.model.collections.suggestions.BaseChangeSuggestion
 
getDiscardedBy() - Method in interface org.gbif.api.model.collections.suggestions.ChangeSuggestion
 
getDisciplines() - Method in class org.gbif.api.model.collections.Institution
Activities to which an institution is dedicated.
getDisciplines() - Method in class org.gbif.api.model.collections.request.InstitutionSearchRequest
 
getDisplayOnNHCPortal() - Method in class org.gbif.api.model.collections.Collection
 
getDisplayOnNHCPortal() - Method in interface org.gbif.api.model.collections.CollectionEntity
Flag to display the entity in the NHC portal.
getDisplayOnNHCPortal() - Method in class org.gbif.api.model.collections.Institution
 
getDisplayOnNHCPortal() - Method in class org.gbif.api.model.collections.request.SearchRequest
 
getDistance() - Method in class org.gbif.api.model.occurrence.geo.DistanceUnit.GeoDistance
 
getDistance() - Method in class org.gbif.api.model.predicate.GeoDistancePredicate
 
getDistanceFromCentroidInMeters() - Method in class org.gbif.api.model.occurrence.Occurrence
The distance in metres from a known centroid, e.g.
getDistinctNamesCount() - Method in class org.gbif.api.model.checklistbank.DatasetMetrics
 
getDistributions() - Method in class org.gbif.api.model.checklistbank.NameUsageContainer
 
getDivision() - Method in class org.gbif.api.model.collections.Collection
 
getDoi() - Method in class org.gbif.api.model.checklistbank.Reference
The pure DOI for the publication without potential http resolver or URI prefix.
getDoi() - Method in class org.gbif.api.model.collections.Collection
Digital Object Identifier assigned to this collection.
getDoi() - Method in class org.gbif.api.model.occurrence.Download
Occurrence download Digital Object Identifier.
getDoi() - Method in class org.gbif.api.model.registry.Dataset
 
getDoi() - Method in class org.gbif.api.model.registry.search.DatasetSearchResult
 
getDoiName() - Method in class org.gbif.api.model.common.DOI
 
getDoiString() - Method in class org.gbif.api.model.common.DOI
 
getDownload() - Method in class org.gbif.api.model.registry.DatasetOccurrenceDownloadUsage
 
getDownloaded() - Method in class org.gbif.api.model.checklistbank.DatasetMetrics
 
getDownloadedRecordsByDataset(Date, Date, Country, UUID, UUID) - Method in interface org.gbif.api.service.registry.OccurrenceDownloadService
Retrieves downloaded records monthly stats by country (user and publishing country) and dataset.
getDownloadKey() - Method in class org.gbif.api.model.registry.DatasetOccurrenceDownloadUsage
Occurrence download key.
getDownloadLink() - Method in class org.gbif.api.model.occurrence.Download
 
getDownloadsByDataset(Date, Date, Country, UUID, UUID) - Method in interface org.gbif.api.service.registry.OccurrenceDownloadService
Retrieves downloads monthly stats by country (user and publishing country) and dataset.
getDownloadsBySource(Date, Date, String) - Method in interface org.gbif.api.service.registry.OccurrenceDownloadService
Retrieves downloads monthly stats by source.
getDownloadsByUserCountry(Date, Date, Country) - Method in interface org.gbif.api.service.registry.OccurrenceDownloadService
Retrieves downloads monthly stats by country (user and publishing country) and dataset.
getDownloadStatistics(Date, Date, Country, UUID, UUID, Pageable) - Method in interface org.gbif.api.service.registry.OccurrenceDownloadService
Retrieves downloads monthly stats by country (user and publishing country) and dataset.
getDuplicateIds() - Method in class org.gbif.api.model.crawler.GenericValidationReport
 
getDuplicateOfDatasetKey() - Method in class org.gbif.api.model.registry.Dataset
If a dataset is registered with GBIF through more than one place we'll mark all but one as a duplicate by pointing it to the canonical dataset.
getDuplicates() - Method in class org.gbif.api.model.collections.duplicates.DuplicatesResult
 
getEarliestAgeOrLowestStage() - Method in class org.gbif.api.model.occurrence.Occurrence
 
getEarliestEonOrLowestEonothem() - Method in class org.gbif.api.model.occurrence.Occurrence
 
getEarliestEpochOrLowestSeries() - Method in class org.gbif.api.model.occurrence.Occurrence
 
getEarliestEraOrLowestErathem() - Method in class org.gbif.api.model.occurrence.Occurrence
 
getEarliestPeriodOrLowestSystem() - Method in class org.gbif.api.model.occurrence.Occurrence
 
getElevation() - Method in class org.gbif.api.model.occurrence.Occurrence
Elevation in meters usually above sea level (altitude).
getElevationAccuracy() - Method in class org.gbif.api.model.occurrence.Occurrence
Elevation accuracy is the uncertainty for the elevation in meters.
getEmail() - Method in class org.gbif.api.model.collections.Collection
 
getEmail() - Method in interface org.gbif.api.model.collections.CollectionEntity
Emails of the entity
getEmail() - Method in class org.gbif.api.model.collections.Contact
 
getEmail() - Method in class org.gbif.api.model.collections.Institution
 
getEmail() - Method in class org.gbif.api.model.common.AbstractGbifUser
 
getEmail() - Method in class org.gbif.api.model.common.User
Deprecated.
 
getEmail() - Method in interface org.gbif.api.model.registry.Address
electronicMailAddress in EML
getEmail() - Method in class org.gbif.api.model.registry.Contact
 
getEmail() - Method in class org.gbif.api.model.registry.Network
 
getEmail() - Method in class org.gbif.api.model.registry.Node
 
getEmail() - Method in class org.gbif.api.model.registry.Organization
 
getEnd() - Method in class org.gbif.api.model.registry.eml.temporal.DateRange
 
getEndDayOfYear() - Method in class org.gbif.api.model.checklistbank.Distribution
Seasonal temporal subcontext within the eventDate context.
getEndDayOfYear() - Method in class org.gbif.api.model.occurrence.Occurrence
The latest integer day of the year of the event.
getEndorsed() - Method in class org.gbif.api.model.registry.Organization
 
getEndorsementStatus() - Method in class org.gbif.api.model.registry.Organization
 
getEndorsingNodeKey() - Method in class org.gbif.api.model.registry.Organization
 
getEndorsingNodeKey() - Method in class org.gbif.api.model.registry.search.DatasetSearchResult
 
getEndpoints() - Method in class org.gbif.api.model.registry.Dataset
 
getEndpoints() - Method in interface org.gbif.api.model.registry.Endpointable
 
getEndpoints() - Method in class org.gbif.api.model.registry.Installation
 
getEndpoints() - Method in class org.gbif.api.model.registry.Network
 
getEndpoints() - Method in class org.gbif.api.model.registry.Node
 
getEndpoints() - Method in class org.gbif.api.model.registry.Organization
 
getEndpointType() - Method in class org.gbif.api.model.crawler.CrawlJob
 
getEntityCountry() - Method in class org.gbif.api.model.collections.suggestions.BaseChangeSuggestion
 
getEntityCountry() - Method in interface org.gbif.api.model.collections.suggestions.ChangeSuggestion
 
getEntityCreatedKey() - Method in class org.gbif.api.model.collections.suggestions.ApplySuggestionResult
 
getEntityKey() - Method in class org.gbif.api.model.collections.suggestions.BaseChangeSuggestion
 
getEntityKey() - Method in interface org.gbif.api.model.collections.suggestions.ChangeSuggestion
 
getEntityMatched() - Method in class org.gbif.api.model.collections.lookup.Match
 
getEntityName() - Method in class org.gbif.api.model.collections.suggestions.BaseChangeSuggestion
 
getEntityName() - Method in interface org.gbif.api.model.collections.suggestions.ChangeSuggestion
 
getEraseAfter() - Method in class org.gbif.api.model.occurrence.Download
 
getErasureNotification() - Method in class org.gbif.api.model.occurrence.Download
 
getEstablishedDate() - Method in class org.gbif.api.model.occurrence.OccurrenceRelation
 
getEstablishmentMeans() - Method in class org.gbif.api.model.checklistbank.Distribution
Term describing whether the organism occurs natively, is introduced or cultivated.
getEstablishmentMeans() - Method in class org.gbif.api.model.occurrence.Occurrence
 
getEventDate() - Method in class org.gbif.api.model.occurrence.Occurrence
The date the occurrence was recorded or collected.
getEventDate() - Method in interface org.gbif.api.ws.mixin.OccurrenceMixin
 
getEventOccurrenceWorkflow() - Static method in class org.gbif.api.model.pipelines.PipelinesWorkflow
 
getEventWorkflow() - Static method in class org.gbif.api.model.pipelines.PipelinesWorkflow
 
getExcludeKeys() - Method in class org.gbif.api.model.collections.duplicates.DuplicatesRequest
 
getExecutionKey() - Method in class org.gbif.api.model.pipelines.ws.SearchResult
 
getExecutions() - Method in class org.gbif.api.model.pipelines.PipelineProcess
 
getExtension() - Method in enum org.gbif.api.model.occurrence.DownloadFormat
 
getExtensionRecordCount(Extension) - Method in class org.gbif.api.model.checklistbank.DatasetMetrics
Number of extension records found in the dataset.
getExtensions() - Method in class org.gbif.api.model.checklistbank.VerbatimNameUsage
A map of extension records, holding all verbatim extension terms.
getExtensions() - Method in class org.gbif.api.model.occurrence.VerbatimOccurrence
A map holding all verbatim extension terms.
getEzid() - Method in enum org.gbif.api.model.common.DoiStatus
 
getFacetLimit() - Method in class org.gbif.api.model.common.search.FacetedSearchRequest
Page size of the facet request.
getFacetMinCount() - Method in class org.gbif.api.model.common.search.FacetedSearchRequest
Min count of facet to return, if the facet count is less than this number the facet won't be included.
getFacetOffset() - Method in class org.gbif.api.model.common.search.FacetedSearchRequest
Offset of the facet request.
getFacetPage(P) - Method in class org.gbif.api.model.common.search.FacetedSearchRequest
Gets the paging configuration of a facet parameter.
getFacetPages() - Method in class org.gbif.api.model.common.search.FacetedSearchRequest
Holds the paging configuration for each requested facet.
getFacets() - Method in class org.gbif.api.model.common.search.FacetedSearchRequest
Gets the list of requested facets by the search operation.
getFacets() - Method in class org.gbif.api.model.common.search.SearchResponse
Gets the resulting facets of a search operation, the list can be empty if no facets were requested.
getFacts() - Method in class org.gbif.api.model.occurrence.Occurrence
 
getFamily() - Method in class org.gbif.api.model.checklistbank.NameUsage
 
getFamily() - Method in class org.gbif.api.model.checklistbank.NameUsageMatch
 
getFamily() - Method in class org.gbif.api.model.checklistbank.search.NameUsageSearchResult
 
getFamily() - Method in class org.gbif.api.model.checklistbank.search.NameUsageSuggestResult
 
getFamily() - Method in interface org.gbif.api.model.common.LinneanClassification
Return the family for this usage.
getFamily() - Method in class org.gbif.api.model.occurrence.Occurrence
 
getFamilyKey() - Method in class org.gbif.api.model.checklistbank.NameUsage
 
getFamilyKey() - Method in class org.gbif.api.model.checklistbank.NameUsageMatch
 
getFamilyKey() - Method in class org.gbif.api.model.checklistbank.search.NameUsageSearchResult
 
getFamilyKey() - Method in class org.gbif.api.model.checklistbank.search.NameUsageSuggestResult
 
getFamilyKey() - Method in interface org.gbif.api.model.common.LinneanClassificationKeys
Return the family key for this usage.
getFamilyKey() - Method in class org.gbif.api.model.occurrence.Occurrence
 
getFax() - Method in class org.gbif.api.model.collections.Contact
 
getField() - Method in class org.gbif.api.model.collections.search.CollectionsSearchResponse.Match
 
getField() - Method in class org.gbif.api.model.collections.suggestions.Change
 
getField() - Method in class org.gbif.api.model.common.search.Facet
The facet field, it's used only for identify the facet in a possible list of facets.
getFieldName() - Method in class org.gbif.api.model.collections.SourceableField
 
getFields() - Method in class org.gbif.api.model.checklistbank.VerbatimNameUsage
A map holding all verbatim core terms.
getFileExtension() - Method in class org.gbif.api.model.occurrence.DownloadRequest
 
getFilteredContacts(ContactType...) - Method in class org.gbif.api.util.ContactAdapter
Filter contacts based on the provided contact types.
getFinished() - Method in class org.gbif.api.model.pipelines.PipelineStep
 
getFinishedCrawling() - Method in class org.gbif.api.model.crawler.DatasetProcessStatus
Timestamp of when the crawl was finished.
getFinishReason() - Method in class org.gbif.api.model.crawler.DatasetProcessStatus
The reason a crawl is finished.
getFirstDateFormatMatch(String) - Static method in class org.gbif.api.util.IsoDateParsingUtils
Iterates over all the OccurrenceDateFormat's and returns the first one that parses successfully the value.
getFirstName() - Method in class org.gbif.api.model.collections.Contact
 
getFirstName() - Method in class org.gbif.api.model.common.AbstractGbifUser
 
getFirstName() - Method in class org.gbif.api.model.common.User
Deprecated.
 
getFirstName() - Method in class org.gbif.api.model.registry.CitationContact
Contact's first name.
getFirstName() - Method in class org.gbif.api.model.registry.Contact
 
getFirstPreferredType(ContactType) - Method in class org.gbif.api.util.ContactAdapter
Get the first primary Contact for the provided type.
getFormat() - Method in class org.gbif.api.model.common.MediaObject
 
getFormat() - Method in class org.gbif.api.model.occurrence.DownloadRequest
 
getFormat() - Method in class org.gbif.api.model.registry.eml.DataDescription
The name of the format of the data object, e.g., Microsoft Excel.
getFormation() - Method in class org.gbif.api.model.occurrence.Occurrence
 
getFormatVersion() - Method in class org.gbif.api.model.registry.eml.DataDescription
The version of the format of the data object, e.g., 2000 (9.0.2720).
getFoundingDate() - Method in class org.gbif.api.model.collections.Institution
Date when the institution was founded or established.
getFragment(long) - Method in interface org.gbif.api.service.occurrence.OccurrenceService
Returns the "fragment" of raw data (either xml response fragment or json dwca fragment) for the passed in key.
getFragmentsEmitted() - Method in class org.gbif.api.model.crawler.DatasetProcessStatus
 
getFragmentsProcessed() - Method in class org.gbif.api.model.crawler.DatasetProcessStatus
Number of fragments that have been processed.
getFragmentsReceived() - Method in class org.gbif.api.model.crawler.DatasetProcessStatus
 
getFrom() - Method in class org.gbif.api.util.IsoDateInterval
 
getFullText() - Method in class org.gbif.api.model.registry.search.DatasetSearchResult
 
getFunding() - Method in class org.gbif.api.model.registry.eml.Project
 
getFuzzyName() - Method in class org.gbif.api.model.collections.request.SearchRequest
 
getGadm() - Method in class org.gbif.api.model.occurrence.Occurrence
 
getGbifRegion() - Method in class org.gbif.api.model.collections.request.SearchRequest
 
getGbifRegion() - Method in class org.gbif.api.model.occurrence.Occurrence
 
getGbifRegion() - Method in class org.gbif.api.model.registry.Node
 
getGbifRegion() - Method in enum org.gbif.api.vocabulary.Country
 
getGenerationDate() - Method in class org.gbif.api.model.collections.duplicates.DuplicatesResult
 
getGenericName() - Method in class org.gbif.api.model.occurrence.Occurrence
 
getGenericReport() - Method in class org.gbif.api.model.crawler.DwcaValidationReport
 
getGenus() - Method in class org.gbif.api.model.checklistbank.NameUsage
 
getGenus() - Method in class org.gbif.api.model.checklistbank.NameUsageMatch
 
getGenus() - Method in class org.gbif.api.model.checklistbank.search.NameUsageSearchResult
 
getGenus() - Method in class org.gbif.api.model.checklistbank.search.NameUsageSuggestResult
 
getGenus() - Method in interface org.gbif.api.model.common.LinneanClassification
Return the genus for this usage.
getGenus() - Method in class org.gbif.api.model.occurrence.Occurrence
 
getGenusKey() - Method in class org.gbif.api.model.checklistbank.NameUsage
 
getGenusKey() - Method in class org.gbif.api.model.checklistbank.NameUsageMatch
 
getGenusKey() - Method in class org.gbif.api.model.checklistbank.search.NameUsageSearchResult
 
getGenusKey() - Method in class org.gbif.api.model.checklistbank.search.NameUsageSuggestResult
 
getGenusKey() - Method in interface org.gbif.api.model.common.LinneanClassificationKeys
Return the genus key for this usage.
getGenusKey() - Method in class org.gbif.api.model.occurrence.Occurrence
 
getGenusOrAbove() - Method in class org.gbif.api.model.checklistbank.ParsedName
The genus part of a bi/trinomial or the monomial in case of names of higher ranks
getGeodeticDatum() - Method in class org.gbif.api.model.event.Event
The geodetic datum for the interpreted decimal coordinates.
getGeodeticDatum() - Method in class org.gbif.api.model.occurrence.Occurrence
The geodetic datum for the interpreted decimal coordinates.
getGeoDistance() - Method in class org.gbif.api.model.predicate.GeoDistancePredicate
 
getGeographicCoverageDescription() - Method in class org.gbif.api.model.registry.Dataset
 
getGeographicCoverages() - Method in class org.gbif.api.model.registry.Dataset
 
getGeographicDescription() - Method in class org.gbif.api.model.collections.Institution
Geographical coverage of the activities performed by an institution.
getGeography() - Method in class org.gbif.api.model.collections.Collection
 
getGeometry() - Method in class org.gbif.api.model.predicate.WithinPredicate
 
getGeoreferencedBy() - Method in class org.gbif.api.model.occurrence.Occurrence
 
getGid() - Method in class org.gbif.api.model.occurrence.GadmFeature
 
getGroup() - Method in class org.gbif.api.model.occurrence.Occurrence
 
getGroup() - Method in enum org.gbif.dwc.terms.DwcTerm
The optional group the term is grouped in.
getGroup() - Method in enum org.gbif.dwc.terms.GbifTerm
The optional group the term is grouped in.
getGt() - Method in class org.gbif.api.util.RangeValue
 
getGte() - Method in class org.gbif.api.util.RangeValue
 
getHabitat() - Method in class org.gbif.api.model.checklistbank.SpeciesProfile
Comma separated list of mayor habitat classification as defined by IUCN in which a species is known to exist: Habitats Vocabulary
getHabitats() - Method in class org.gbif.api.model.checklistbank.NameUsageContainer
Convenience method that analyzes all species profile records and returns the distinct list of known habitats.
getHabitats() - Method in class org.gbif.api.model.checklistbank.search.NameUsageSearchResult
 
getHigherClassification(LinneanClassification) - Static method in class org.gbif.api.util.ClassificationUtils
Concatenates all higher Linnean taxa into a single dwc:higherClassification string, skipping null values.
getHigherClassificationMap() - Method in class org.gbif.api.model.checklistbank.NameUsage
An ordered map with entries for all higher Linnean ranks down to the actual direct parent of this usage.
getHigherClassificationMap() - Method in class org.gbif.api.model.checklistbank.search.NameUsageSearchResult
An ordered map with entries for all higher Linnean ranks down to the actual direct parent of this usage.
getHigherClassificationMap() - Method in class org.gbif.api.model.checklistbank.search.NameUsageSuggestResult
An ordered map with entries for all higher Linnean ranks down to the actual direct parent of this usage.
getHigherClassificationMap() - Method in class org.gbif.api.model.occurrence.Occurrence
An ordered map with entries for all higher Linnean ranks excluding the taxonKey itself.
getHigherClassificationMap(T) - Static method in class org.gbif.api.util.ClassificationUtils
An ordered map with entries for all higher Linnean ranks down to species which are not null.
getHigherClassificationMap(T, int, Integer, String) - Static method in class org.gbif.api.util.ClassificationUtils
An ordered map with entries for all higher Linnean ranks down to the actual direct parent of this usage.
getHigherGeography() - Method in class org.gbif.api.model.occurrence.Occurrence
 
getHigherRank(Rank) - Method in class org.gbif.api.model.checklistbank.NameUsage
 
getHigherRank(Rank) - Method in class org.gbif.api.model.checklistbank.NameUsageMatch
 
getHigherRank(Rank) - Method in class org.gbif.api.model.checklistbank.search.NameUsageSearchResult
 
getHigherRank(Rank) - Method in class org.gbif.api.model.checklistbank.search.NameUsageSuggestResult
 
getHigherRank(Rank) - Method in interface org.gbif.api.model.common.LinneanClassification
Gets a higher taxon property by passing the rank of it.
getHigherRank(Rank) - Method in class org.gbif.api.model.occurrence.Occurrence
 
getHigherRank(LinneanClassification, Rank) - Static method in class org.gbif.api.util.ClassificationUtils
Gets a higher taxon property by passing the rank of it.
getHigherRankKey(Rank) - Method in class org.gbif.api.model.checklistbank.NameUsage
 
getHigherRankKey(Rank) - Method in class org.gbif.api.model.checklistbank.NameUsageMatch
 
getHigherRankKey(Rank) - Method in class org.gbif.api.model.checklistbank.search.NameUsageSearchResult
 
getHigherRankKey(Rank) - Method in class org.gbif.api.model.checklistbank.search.NameUsageSuggestResult
 
getHigherRankKey(Rank) - Method in interface org.gbif.api.model.common.LinneanClassificationKeys
Gets a higher taxon key by passing the rank of it.
getHigherRankKey(Rank) - Method in class org.gbif.api.model.occurrence.Occurrence
 
getHigherRankKey(LinneanClassificationKeys, Rank) - Static method in class org.gbif.api.util.ClassificationUtils
Gets a higher taxon key by passing the rank of it.
getHighestBiostratigraphicZone() - Method in class org.gbif.api.model.occurrence.Occurrence
 
getHighlightContext() - Method in class org.gbif.api.model.checklistbank.search.NameUsageSearchRequest
 
getHighlightContext() - Method in class org.gbif.api.model.registry.search.DatasetSearchRequest
 
getHighlightFields() - Method in class org.gbif.api.model.common.search.SearchRequest
Defines the fields to be highlighted if highlighting is activated.
getHomepage() - Method in class org.gbif.api.model.collections.Collection
URL containing information about a collection.
getHomepage() - Method in class org.gbif.api.model.collections.Institution
URL to the home page of an institution.
getHomepage() - Method in interface org.gbif.api.model.registry.Address
List of homepage websites.
getHomepage() - Method in class org.gbif.api.model.registry.Contact
 
getHomepage() - Method in class org.gbif.api.model.registry.Dataset
 
getHomepage() - Method in class org.gbif.api.model.registry.Network
 
getHomepage() - Method in class org.gbif.api.model.registry.Node
 
getHomepage() - Method in class org.gbif.api.model.registry.Organization
 
getHomepage() - Method in interface org.gbif.api.ws.mixin.DatasetMixin
 
getHostedDatasets(UUID, Pageable) - Method in interface org.gbif.api.service.registry.InstallationService
Provides paging service to list datasets hosted by a specific installation.
getHostingCountry() - Method in class org.gbif.api.model.registry.search.DatasetSearchResult
 
getHostingOrganizationKey() - Method in class org.gbif.api.model.occurrence.VerbatimOccurrence
Organization key of the installation that hosts the occurrence record.
getHostingOrganizationKey() - Method in class org.gbif.api.model.registry.search.DatasetSearchResult
 
getHostingOrganizationTitle() - Method in class org.gbif.api.model.registry.search.DatasetSearchResult
 
getId() - Method in class org.gbif.api.model.collections.UserId
 
getId() - Method in class org.gbif.api.model.occurrence.MeasurementOrFact
 
getId() - Method in class org.gbif.api.model.occurrence.OccurrenceRelation
 
getId() - Method in class org.gbif.api.v2.NameUsageMatch2.Nomenclature
 
getId() - Method in interface org.gbif.api.vocabulary.InterpretationRemark
Returns the identifier of the InterpretationRemark.
getId() - Method in enum org.gbif.api.vocabulary.NameUsageIssue
 
getId() - Method in enum org.gbif.api.vocabulary.OccurrenceIssue
 
getIdentifiedBy() - Method in class org.gbif.api.model.occurrence.Occurrence
 
getIdentifiedByIds() - Method in class org.gbif.api.model.occurrence.Occurrence
 
getIdentifier() - Method in class org.gbif.api.model.collections.OccurrenceMapping
 
getIdentifier() - Method in class org.gbif.api.model.collections.request.SearchRequest
 
getIdentifier() - Method in class org.gbif.api.model.common.Identifier
Other known identifier used for the same taxon.
getIdentifier() - Method in class org.gbif.api.model.common.MediaObject
The public URL that identifies and locates the media item.
getIdentifier() - Method in class org.gbif.api.model.registry.Citation
 
getIdentifier() - Method in class org.gbif.api.model.registry.eml.Collection
The URI (LSID or URL) of the collection.
getIdentifier() - Method in class org.gbif.api.model.registry.eml.Project
A unique identifier for the project.
getIdentifier() - Method in class org.gbif.api.model.registry.Identifier
 
getIdentifierByType(IdentifierType) - Method in class org.gbif.api.model.checklistbank.NameUsageContainer
 
getIdentifierLink() - Method in class org.gbif.api.model.common.Identifier
Creates an HTTP link for an identifier if possible by passing it to some known resolvers for the specific id type.
getIdentifierLink() - Method in class org.gbif.api.model.registry.Identifier
Creates a http link for an identifier if possible by passing it to some known resolvers for the specific id type.
getIdentifierLink(String, IdentifierType) - Static method in class org.gbif.api.util.IdentifierUtils
Creates a http link for an identifier if possible by passing it to some known resolvers for the specific id type.
getIdentifiers() - Method in class org.gbif.api.model.checklistbank.NameUsageContainer
 
getIdentifiers() - Method in class org.gbif.api.model.collections.Collection
List of alternative identifiers: UUIDs, external system identifiers, LSIDs, etc..
getIdentifiers() - Method in class org.gbif.api.model.collections.Institution
 
getIdentifiers() - Method in class org.gbif.api.model.occurrence.Occurrence
 
getIdentifiers() - Method in class org.gbif.api.model.registry.Dataset
 
getIdentifiers() - Method in interface org.gbif.api.model.registry.Identifiable
 
getIdentifiers() - Method in class org.gbif.api.model.registry.Installation
 
getIdentifiers() - Method in class org.gbif.api.model.registry.Network
 
getIdentifiers() - Method in class org.gbif.api.model.registry.Node
 
getIdentifiers() - Method in class org.gbif.api.model.registry.Organization
 
getIdentifierType() - Method in class org.gbif.api.model.collections.request.SearchRequest
 
getImportantCollectors() - Method in class org.gbif.api.model.collections.Collection
 
getIncorporatedCollections() - Method in class org.gbif.api.model.collections.Collection
 
getInCountries() - Method in class org.gbif.api.model.collections.duplicates.DuplicatesRequest
 
getIndividualCount() - Method in class org.gbif.api.model.occurrence.Occurrence
 
getInfraGeneric() - Method in class org.gbif.api.model.checklistbank.ParsedName
The infrageneric part of a name, often given in parentheses between genus and species epithet, e.g.
getInfraSpecificEpithet() - Method in class org.gbif.api.model.checklistbank.ParsedName
 
getInfraspecificEpithet() - Method in class org.gbif.api.model.occurrence.Occurrence
 
getIngestion(UUID, int) - Method in interface org.gbif.api.service.pipelines.IngestionHistoryService
 
getInInstitutions() - Method in class org.gbif.api.model.collections.duplicates.DuplicatesRequest
 
getInstallationKey() - Method in class org.gbif.api.model.occurrence.VerbatimOccurrence
Technical installation that publishes this occurrence record.
getInstallationKey() - Method in class org.gbif.api.model.registry.Dataset
 
getInstallationKey() - Method in class org.gbif.api.model.registry.metasync.MetasyncHistory
Key of the synchronized installation.
getInstitution() - Method in class org.gbif.api.model.collections.request.CollectionSearchRequest
 
getInstitutionalGovernance() - Method in class org.gbif.api.model.collections.Institution
Governance nature of an institution.
getInstitutionalGovernance() - Method in class org.gbif.api.model.collections.request.InstitutionSearchRequest
 
getInstitutionCode() - Method in class org.gbif.api.model.checklistbank.TypeSpecimen
Deprecated.
getInstitutionCode() - Method in class org.gbif.api.model.collections.InstitutionImportParams
 
getInstitutionCode() - Method in class org.gbif.api.model.collections.lookup.CollectionMatched
 
getInstitutionCode() - Method in class org.gbif.api.model.collections.lookup.LookupParams
 
getInstitutionCode() - Method in class org.gbif.api.model.collections.search.CollectionsSearchResponse
 
getInstitutionCode() - Method in class org.gbif.api.model.collections.view.CollectionView
 
getInstitutionCode() - Method in class org.gbif.api.model.metrics.RecordError
Deprecated.
 
getInstitutionForConvertedCollection() - Method in class org.gbif.api.model.collections.suggestions.InstitutionChangeSuggestion
 
getInstitutionForNewCollectionKey() - Method in class org.gbif.api.model.collections.merge.ConvertToCollectionParams
 
getInstitutionId() - Method in class org.gbif.api.model.collections.lookup.LookupParams
 
getInstitutionKey() - Method in class org.gbif.api.model.collections.Collection
Institution that owns or hosts this collection.
getInstitutionKey() - Method in class org.gbif.api.model.collections.duplicates.Duplicate
 
getInstitutionKey() - Method in class org.gbif.api.model.collections.lookup.CollectionMatched
 
getInstitutionKey() - Method in class org.gbif.api.model.collections.search.CollectionsSearchResponse
 
getInstitutionKey() - Method in class org.gbif.api.model.occurrence.Occurrence
 
getInstitutionKeys() - Method in class org.gbif.api.model.collections.request.SearchRequest
 
getInstitutionLink() - Method in class org.gbif.api.model.collections.lookup.CollectionMatched
 
getInstitutionMatch() - Method in class org.gbif.api.model.collections.lookup.LookupResult
 
getInstitutionMatches() - Method in class org.gbif.api.model.collections.lookup.AlternativeMatches
 
getInstitutionName() - Method in class org.gbif.api.model.collections.lookup.CollectionMatched
 
getInstitutionName() - Method in class org.gbif.api.model.collections.search.CollectionsSearchResponse
 
getInstitutionName() - Method in class org.gbif.api.model.collections.view.CollectionView
 
getInterpreted() - Method in class org.gbif.api.model.common.InterpretedField
Deprecated.
 
getInterpretedOccurrencesPersistedError() - Method in class org.gbif.api.model.crawler.DatasetProcessStatus
 
getInterpretedOccurrencesPersistedSuccessful() - Method in class org.gbif.api.model.crawler.DatasetProcessStatus
 
getInvalidationReason() - Method in class org.gbif.api.model.crawler.DwcaValidationReport
 
getInvalidationReason() - Method in class org.gbif.api.model.crawler.GenericValidationReport
 
getInvalidationReason() - Method in class org.gbif.api.model.crawler.OccurrenceValidationReport
 
getIsInCluster() - Method in class org.gbif.api.model.occurrence.Occurrence
 
getIso2LetterCode() - Method in enum org.gbif.api.vocabulary.Country
 
getIso2LetterCode() - Method in enum org.gbif.api.vocabulary.Language
 
getIso3LetterCode() - Method in enum org.gbif.api.vocabulary.Country
 
getIso3LetterCode() - Method in enum org.gbif.api.vocabulary.Language
 
getIsoNumericalCode() - Method in enum org.gbif.api.vocabulary.Country
 
getIsSequenced() - Method in class org.gbif.api.model.occurrence.Occurrence
Flag occurrence when associatedSequences/extension exists
getIssues() - Method in class org.gbif.api.model.checklistbank.NameUsage
 
getIssues() - Method in class org.gbif.api.model.occurrence.Occurrence
A set of issues found for this occurrence.
getIucnRedListCategory() - Method in class org.gbif.api.model.occurrence.Occurrence
The IUCN Red List Category.
getKey() - Method in class org.gbif.api.model.ChallengeCode
 
getKey() - Method in class org.gbif.api.model.checklistbank.DatasetMetrics
 
getKey() - Method in class org.gbif.api.model.checklistbank.Description
A unique GBIF identifier for any description.
getKey() - Method in class org.gbif.api.model.checklistbank.NameUsage
Return the key that uniquely identifies this name usage.
getKey() - Method in class org.gbif.api.model.checklistbank.NameUsageMetrics
Return the key that uniquely identifies this name usage.
getKey() - Method in class org.gbif.api.model.checklistbank.ParsedName
 
getKey() - Method in class org.gbif.api.model.checklistbank.search.NameUsageSearchResult
 
getKey() - Method in class org.gbif.api.model.checklistbank.search.NameUsageSuggestResult
Taxon key.
getKey() - Method in class org.gbif.api.model.checklistbank.VerbatimNameUsage
 
getKey() - Method in class org.gbif.api.model.collections.Address
Unique identifier, assigned by the persistence store.
getKey() - Method in class org.gbif.api.model.collections.Collection
GBIF Unique identifier of this collection.
getKey() - Method in interface org.gbif.api.model.collections.CollectionEntity
Unique identifier.
getKey() - Method in class org.gbif.api.model.collections.Contact
 
getKey() - Method in class org.gbif.api.model.collections.duplicates.Duplicate
 
getKey() - Method in class org.gbif.api.model.collections.Institution
GBIF unique identifier.
getKey() - Method in class org.gbif.api.model.collections.lookup.BaseEntityMatched
 
getKey() - Method in interface org.gbif.api.model.collections.lookup.EntityMatched
 
getKey() - Method in class org.gbif.api.model.collections.MasterSourceMetadata
 
getKey() - Method in class org.gbif.api.model.collections.OccurrenceMapping
Unique identifier, assigned by the persistence store.
getKey() - Method in class org.gbif.api.model.collections.search.CollectionsSearchResponse
 
getKey() - Method in class org.gbif.api.model.collections.suggestions.BaseChangeSuggestion
 
getKey() - Method in interface org.gbif.api.model.collections.suggestions.ChangeSuggestion
 
getKey() - Method in class org.gbif.api.model.common.GbifUser
 
getKey() - Method in class org.gbif.api.model.common.User
Deprecated.
 
getKey() - Method in class org.gbif.api.model.metrics.cube.Dimension
 
getKey() - Method in class org.gbif.api.model.occurrence.Download
 
getKey() - Method in class org.gbif.api.model.occurrence.VerbatimOccurrence
The GBIF assigned, persistent key to the occurrence record.
getKey() - Method in class org.gbif.api.model.pipelines.PipelineExecution
 
getKey() - Method in class org.gbif.api.model.pipelines.PipelineProcess
 
getKey() - Method in class org.gbif.api.model.pipelines.PipelineStep
 
getKey() - Method in class org.gbif.api.model.predicate.InPredicate
 
getKey() - Method in class org.gbif.api.model.predicate.RangePredicate
 
getKey() - Method in class org.gbif.api.model.predicate.SimplePredicate
 
getKey() - Method in class org.gbif.api.model.registry.CitationContact
Key associated to this contact.
getKey() - Method in class org.gbif.api.model.registry.Comment
 
getKey() - Method in class org.gbif.api.model.registry.Contact
 
getKey() - Method in class org.gbif.api.model.registry.Dataset
 
getKey() - Method in class org.gbif.api.model.registry.Endpoint
 
getKey() - Method in class org.gbif.api.model.registry.Grid
 
getKey() - Method in class org.gbif.api.model.registry.Identifier
 
getKey() - Method in class org.gbif.api.model.registry.Installation
 
getKey() - Method in class org.gbif.api.model.registry.MachineTag
 
getKey() - Method in class org.gbif.api.model.registry.Metadata
 
getKey() - Method in class org.gbif.api.model.registry.Network
 
getKey() - Method in interface org.gbif.api.model.registry.NetworkEntity
 
getKey() - Method in class org.gbif.api.model.registry.Node
 
getKey() - Method in class org.gbif.api.model.registry.Organization
 
getKey() - Method in class org.gbif.api.model.registry.search.collections.KeyCodeNameResult
 
getKey() - Method in class org.gbif.api.model.registry.search.DatasetSearchResult
 
getKey() - Method in class org.gbif.api.model.registry.search.DatasetSuggestResult
 
getKey() - Method in class org.gbif.api.model.registry.search.KeyTitleResult
 
getKey() - Method in class org.gbif.api.model.registry.Tag
 
getKey() - Method in class org.gbif.api.v2.RankedName
 
getKeywordCollections() - Method in class org.gbif.api.model.registry.Dataset
 
getKeywords() - Method in class org.gbif.api.model.registry.eml.KeywordCollection
 
getKeywords() - Method in class org.gbif.api.model.registry.search.DatasetSearchResult
 
getKingdom() - Method in class org.gbif.api.model.checklistbank.NameUsage
 
getKingdom() - Method in class org.gbif.api.model.checklistbank.NameUsageMatch
 
getKingdom() - Method in class org.gbif.api.model.checklistbank.search.NameUsageSearchResult
 
getKingdom() - Method in class org.gbif.api.model.checklistbank.search.NameUsageSuggestResult
 
getKingdom() - Method in interface org.gbif.api.model.common.LinneanClassification
Return the kingdom for this usage.
getKingdom() - Method in class org.gbif.api.model.occurrence.Occurrence
 
getKingdomCounts() - Method in interface org.gbif.api.service.occurrence.OccurrenceDistributionIndexService
Returns the occurrence records count by kingdom.
getKingdomKey() - Method in class org.gbif.api.model.checklistbank.NameUsage
 
getKingdomKey() - Method in class org.gbif.api.model.checklistbank.NameUsageMatch
 
getKingdomKey() - Method in class org.gbif.api.model.checklistbank.search.NameUsageSearchResult
 
getKingdomKey() - Method in class org.gbif.api.model.checklistbank.search.NameUsageSuggestResult
 
getKingdomKey() - Method in interface org.gbif.api.model.common.LinneanClassificationKeys
Return the kingdom key for this usage.
getKingdomKey() - Method in class org.gbif.api.model.occurrence.Occurrence
 
getLabel() - Method in enum org.gbif.api.model.pipelines.StepType
 
getLanguage() - Method in class org.gbif.api.model.checklistbank.Description
ISO 639-1 language code used for the description.
getLanguage() - Method in class org.gbif.api.model.checklistbank.VernacularName
ISO 639-1 language code used for the vernacular name value.
getLanguage() - Method in class org.gbif.api.model.registry.Dataset
 
getLanguage() - Method in class org.gbif.api.model.registry.Network
 
getLanguage() - Method in class org.gbif.api.model.registry.Organization
 
getLastCrawled() - Method in class org.gbif.api.model.checklistbank.NameUsage
The date this record was last crawled during clb indexing.
getLastCrawled() - Method in class org.gbif.api.model.checklistbank.VerbatimNameUsage
The date this record was last crawled during clb indexing.
getLastCrawled() - Method in class org.gbif.api.model.occurrence.VerbatimOccurrence
The date this record was last crawled/harvested from the endpoint.
getLastInterpreted() - Method in class org.gbif.api.model.checklistbank.NameUsage
The date this record was last interpreted during indexing.
getLastInterpreted() - Method in class org.gbif.api.model.occurrence.Occurrence
The date this occurrence last went through the interpretation phase of the GBIF indexing.
getLastLogin() - Method in class org.gbif.api.model.common.GbifUser
 
getLastLogin() - Method in class org.gbif.api.model.common.User
Deprecated.
 
getLastName() - Method in class org.gbif.api.model.collections.Contact
 
getLastName() - Method in class org.gbif.api.model.common.AbstractGbifUser
 
getLastName() - Method in class org.gbif.api.model.common.User
Deprecated.
 
getLastName() - Method in class org.gbif.api.model.registry.CitationContact
Contact's last name.
getLastName() - Method in class org.gbif.api.model.registry.Contact
 
getLastParsed() - Method in class org.gbif.api.model.occurrence.VerbatimOccurrence
The date this record was last parsed from raw xml/json into verbatim verbatimFields.
getLastStep() - Method in class org.gbif.api.model.pipelines.WorkflowStep
 
getLatestAgeOrHighestStage() - Method in class org.gbif.api.model.occurrence.Occurrence
 
getLatestEonOrHighestEonothem() - Method in class org.gbif.api.model.occurrence.Occurrence
 
getLatestEpochOrHighestSeries() - Method in class org.gbif.api.model.occurrence.Occurrence
 
getLatestEraOrHighestErathem() - Method in class org.gbif.api.model.occurrence.Occurrence
 
getLatestPeriodOrHighestSystem() - Method in class org.gbif.api.model.occurrence.Occurrence
 
getLatinLabel() - Method in enum org.gbif.api.vocabulary.NomenclaturalStatus
 
getLatitude() - Method in class org.gbif.api.model.collections.Institution
Decimal latitude of where this institution is located.
getLatitude() - Method in class org.gbif.api.model.occurrence.geo.DistanceUnit.GeoDistance
 
getLatitude() - Method in class org.gbif.api.model.predicate.GeoDistancePredicate
 
getLatitude() - Method in class org.gbif.api.model.registry.eml.geospatial.Point
 
getLatitude() - Method in class org.gbif.api.model.registry.Organization
 
getLevel(T) - Method in class org.gbif.api.model.pipelines.PipelinesWorkflow.Graph
 
getLevel0() - Method in class org.gbif.api.model.occurrence.Gadm
 
getLevel1() - Method in class org.gbif.api.model.occurrence.Gadm
 
getLevel2() - Method in class org.gbif.api.model.occurrence.Gadm
 
getLevel3() - Method in class org.gbif.api.model.occurrence.Gadm
 
getLicense() - Method in class org.gbif.api.model.checklistbank.Description
Official permission to do something with the resource.
getLicense() - Method in class org.gbif.api.model.common.MediaObject
Licence for this media item.
getLicense() - Method in class org.gbif.api.model.occurrence.Download
Get the license assigned to this occurrence download.
getLicense() - Method in class org.gbif.api.model.occurrence.Occurrence
Applied license to the occurrence record or dataset to which this record belongs to.
getLicense() - Method in class org.gbif.api.model.registry.Dataset
Persisted in the database table.
getLicense() - Method in class org.gbif.api.model.registry.search.DatasetSearchResult
 
getLicense() - Method in interface org.gbif.api.ws.mixin.LicenseMixin
 
getLicenseTitle() - Method in enum org.gbif.api.vocabulary.License
 
getLicenseUrl() - Method in enum org.gbif.api.vocabulary.License
 
getLifeForm() - Method in class org.gbif.api.model.checklistbank.SpeciesProfile
A term describing the growth/lifeform of an organism.
getLifeStage() - Method in class org.gbif.api.model.checklistbank.Distribution
The distribution information pertains solely to a specific life stage of the taxon.
getLifeStage() - Method in class org.gbif.api.model.checklistbank.VernacularName
The age class or life stage of the species for which the vernacular name applies.
getLifeStage() - Method in class org.gbif.api.model.occurrence.Occurrence
 
getLimit() - Method in interface org.gbif.api.model.common.paging.Pageable
Maximum number of records to be returned.
getLimit() - Method in class org.gbif.api.model.common.paging.PageableBase
Total of rows that are returned.
getLineage() - Method in class org.gbif.api.v2.NameUsageMatch2.Diagnostics
 
getLink() - Method in class org.gbif.api.model.checklistbank.Reference
Link.
getLink() - Method in enum org.gbif.api.vocabulary.NomenclaturalCode
 
getLivingPeriod() - Method in class org.gbif.api.model.checklistbank.SpeciesProfile
The (geological) time a currently extinct organism is known to have lived.
getLivingPeriods() - Method in class org.gbif.api.model.checklistbank.NameUsageContainer
Convenience method that analyzes all species profile records and returns the distinct list of known living periods.
getLocale() - Method in class org.gbif.api.model.common.AbstractGbifUser
 
getLocale() - Method in enum org.gbif.api.vocabulary.Language
 
getLocality() - Method in class org.gbif.api.model.checklistbank.Distribution
The verbatim name of the area this distribution record is about.
getLocality() - Method in class org.gbif.api.model.checklistbank.TypeSpecimen
Deprecated.
getLocationId() - Method in class org.gbif.api.model.checklistbank.Distribution
A code for the named area this distributon record is about.
getLogoUrl() - Method in class org.gbif.api.model.collections.Institution
Logo/Image that identifies the institution.
getLogoUrl() - Method in class org.gbif.api.model.registry.Dataset
 
getLogoUrl() - Method in class org.gbif.api.model.registry.Network
 
getLogoUrl() - Method in class org.gbif.api.model.registry.Node
 
getLogoUrl() - Method in class org.gbif.api.model.registry.Organization
 
getLogoUrl() - Method in interface org.gbif.api.ws.mixin.EntityWithLogoMixin
 
getLongitude() - Method in class org.gbif.api.model.collections.Institution
Decimal longitude of where this institution is located.
getLongitude() - Method in class org.gbif.api.model.occurrence.geo.DistanceUnit.GeoDistance
 
getLongitude() - Method in class org.gbif.api.model.predicate.GeoDistancePredicate
 
getLongitude() - Method in class org.gbif.api.model.registry.eml.geospatial.Point
 
getLongitude() - Method in class org.gbif.api.model.registry.Organization
 
getLower() - Method in class org.gbif.api.model.registry.eml.curatorial.CuratorialUnitComposite
 
getLower() - Method in class org.gbif.api.model.registry.eml.curatorial.CuratorialUnitRange
 
getLowestBiostratigraphicZone() - Method in class org.gbif.api.model.occurrence.Occurrence
 
getLt() - Method in class org.gbif.api.util.RangeValue
 
getLte() - Method in class org.gbif.api.util.RangeValue
 
getMachineTagName() - Method in class org.gbif.api.model.collections.request.SearchRequest
 
getMachineTagNamespace() - Method in class org.gbif.api.model.collections.request.SearchRequest
 
getMachineTags() - Method in class org.gbif.api.model.collections.Collection
 
getMachineTags() - Method in class org.gbif.api.model.collections.Institution
 
getMachineTags() - Method in class org.gbif.api.model.registry.Dataset
 
getMachineTags() - Method in class org.gbif.api.model.registry.Endpoint
 
getMachineTags() - Method in class org.gbif.api.model.registry.Installation
 
getMachineTags() - Method in interface org.gbif.api.model.registry.MachineTaggable
 
getMachineTags() - Method in class org.gbif.api.model.registry.Network
 
getMachineTags() - Method in class org.gbif.api.model.registry.Node
 
getMachineTags() - Method in class org.gbif.api.model.registry.Organization
 
getMachineTagValue() - Method in class org.gbif.api.model.collections.request.SearchRequest
 
getMailingAddress() - Method in class org.gbif.api.model.collections.Collection
Address used to send/receive physical mail.
getMailingAddress() - Method in interface org.gbif.api.model.collections.Contactable
Address used to send and receive mail.
getMailingAddress() - Method in class org.gbif.api.model.collections.Institution
 
getMailingCity() - Method in class org.gbif.api.model.collections.duplicates.Duplicate
 
getMailingCountry() - Method in class org.gbif.api.model.collections.duplicates.Duplicate
 
getMailingCountry() - Method in class org.gbif.api.model.collections.search.CollectionsSearchResponse
 
getMaintenanceDescription() - Method in class org.gbif.api.model.registry.Dataset
A description of the maintenance frequency of this resource.
getMaintenanceUpdateFrequency() - Method in class org.gbif.api.model.registry.Dataset
Persisted in the database table.
getMarker() - Method in enum org.gbif.api.vocabulary.Rank
 
getMassInGram() - Method in class org.gbif.api.model.checklistbank.SpeciesProfile
Maximum observed weight of an organism in grams.
getMasterSource() - Method in class org.gbif.api.model.collections.Collection
 
getMasterSource() - Method in interface org.gbif.api.model.collections.CollectionEntity
Master source of the entity.
getMasterSource() - Method in class org.gbif.api.model.collections.Institution
 
getMasterSource() - Method in class org.gbif.api.model.collections.SourceableField.Source
 
getMasterSourceMetadata() - Method in class org.gbif.api.model.collections.Collection
 
getMasterSourceMetadata() - Method in interface org.gbif.api.model.collections.CollectionEntity
Master source metadata
getMasterSourceMetadata() - Method in class org.gbif.api.model.collections.Institution
 
getMasterSourceMetadata(UUID) - Method in interface org.gbif.api.service.collections.CollectionEntityService
Returns the MasterSourceMetadata of the entity.
getMasterSourceType() - Method in class org.gbif.api.model.collections.request.SearchRequest
 
getMatches() - Method in class org.gbif.api.model.collections.search.CollectionsSearchResponse
 
getMatchType() - Method in class org.gbif.api.model.checklistbank.NameUsageMatch
 
getMatchType() - Method in class org.gbif.api.model.collections.lookup.Match
 
getMatchType() - Method in class org.gbif.api.v2.NameUsageMatch2.Diagnostics
 
getMaxLatitude() - Method in class org.gbif.api.model.registry.eml.geospatial.BoundingBox
 
getMaxLongitude() - Method in class org.gbif.api.model.registry.eml.geospatial.BoundingBox
 
getMaxPercent() - Method in class org.gbif.api.model.registry.Grid
 
getMedia() - Method in class org.gbif.api.model.checklistbank.NameUsageContainer
 
getMedia() - Method in class org.gbif.api.model.occurrence.Occurrence
 
getMember() - Method in class org.gbif.api.model.occurrence.Occurrence
 
getMergeTargetKey() - Method in class org.gbif.api.model.collections.suggestions.BaseChangeSuggestion
 
getMergeTargetKey() - Method in interface org.gbif.api.model.collections.suggestions.ChangeSuggestion
 
getMessage() - Method in class org.gbif.api.model.common.messaging.Response
 
getMessage() - Method in class org.gbif.api.model.pipelines.PipelineStep
 
getMessage() - Method in class org.gbif.api.model.pipelines.RunPipelineResponse
 
getMessageKey() - Method in class org.gbif.api.model.common.messaging.Response
 
getMetadata(int) - Method in interface org.gbif.api.service.registry.DatasetService
Get a metadata description by its key.
getMetadataDocument(UUID) - Method in interface org.gbif.api.service.registry.DatasetService
Retrieves a GBIF generated EML document overlaying GBIF information with any existing metadata document data.
getMetadataDocument(int) - Method in interface org.gbif.api.service.registry.DatasetService
Gets the actual metadata document content by its key.
getMetadataProviders() - Method in class org.gbif.api.util.ContactAdapter
Get the list of Contact of type ContactType.METADATA_AUTHOR.
getMeters() - Method in enum org.gbif.api.model.occurrence.geo.DistanceUnit
 
getMethod() - Method in class org.gbif.api.model.occurrence.MeasurementOrFact
 
getMethodSteps() - Method in class org.gbif.api.model.registry.eml.SamplingDescription
 
getMetrics() - Method in class org.gbif.api.model.pipelines.PipelineStep
 
getMetrics(int) - Method in interface org.gbif.api.service.checklistbank.NameUsageService
Gets the metrics for a given name usage.
getMinDist() - Method in class org.gbif.api.model.registry.Grid
 
getMinDistCount() - Method in class org.gbif.api.model.registry.Grid
 
getMinLatitude() - Method in class org.gbif.api.model.registry.eml.geospatial.BoundingBox
 
getMinLongitude() - Method in class org.gbif.api.model.registry.eml.geospatial.BoundingBox
 
getModified() - Method in class org.gbif.api.model.checklistbank.NameUsage
The interpreted dc:modified from the verbatim source data.
getModified() - Method in class org.gbif.api.model.collections.Collection
 
getModified() - Method in interface org.gbif.api.model.collections.CollectionEntity
Date when the records was last modified.
getModified() - Method in class org.gbif.api.model.collections.Contact
 
getModified() - Method in class org.gbif.api.model.collections.Institution
 
getModified() - Method in class org.gbif.api.model.collections.suggestions.BaseChangeSuggestion
 
getModified() - Method in interface org.gbif.api.model.collections.suggestions.ChangeSuggestion
 
getModified() - Method in class org.gbif.api.model.occurrence.Download
 
getModified() - Method in class org.gbif.api.model.occurrence.Occurrence
The interpreted dc:modified from the verbatim source data.
getModified() - Method in class org.gbif.api.model.pipelines.PipelineStep
 
getModified() - Method in class org.gbif.api.model.registry.Comment
 
getModified() - Method in class org.gbif.api.model.registry.Contact
 
getModified() - Method in class org.gbif.api.model.registry.Dataset
 
getModified() - Method in class org.gbif.api.model.registry.Endpoint
 
getModified() - Method in class org.gbif.api.model.registry.Installation
 
getModified() - Method in class org.gbif.api.model.registry.Metadata
 
getModified() - Method in class org.gbif.api.model.registry.Network
 
getModified() - Method in interface org.gbif.api.model.registry.NetworkEntity
 
getModified() - Method in class org.gbif.api.model.registry.Node
 
getModified() - Method in class org.gbif.api.model.registry.Organization
 
getModifiedBy() - Method in class org.gbif.api.model.collections.Collection
 
getModifiedBy() - Method in interface org.gbif.api.model.collections.CollectionEntity
Person or agent that modified the database record.
getModifiedBy() - Method in class org.gbif.api.model.collections.Contact
 
getModifiedBy() - Method in class org.gbif.api.model.collections.Institution
 
getModifiedBy() - Method in class org.gbif.api.model.collections.suggestions.BaseChangeSuggestion
 
getModifiedBy() - Method in interface org.gbif.api.model.collections.suggestions.ChangeSuggestion
 
getModifiedBy() - Method in class org.gbif.api.model.pipelines.PipelineStep
 
getModifiedBy() - Method in class org.gbif.api.model.registry.Comment
 
getModifiedBy() - Method in class org.gbif.api.model.registry.Contact
 
getModifiedBy() - Method in class org.gbif.api.model.registry.Dataset
 
getModifiedBy() - Method in class org.gbif.api.model.registry.Endpoint
 
getModifiedBy() - Method in class org.gbif.api.model.registry.Installation
 
getModifiedBy() - Method in class org.gbif.api.model.registry.Metadata
 
getModifiedBy() - Method in class org.gbif.api.model.registry.Network
 
getModifiedBy() - Method in interface org.gbif.api.model.registry.NetworkEntity
 
getModifiedBy() - Method in class org.gbif.api.model.registry.Node
 
getModifiedBy() - Method in class org.gbif.api.model.registry.Organization
 
getMonth() - Method in class org.gbif.api.model.occurrence.DownloadStatistics
 
getMonth() - Method in class org.gbif.api.model.occurrence.Occurrence
The month of the year of the event date starting with zero for january following Date.
getMostRestrictive(License, License, License) - Static method in enum org.gbif.api.vocabulary.License
Get the most restrictive license between the 2 provided licenses.
getName() - Method in class org.gbif.api.model.collections.Collection
Descriptive name of a collection.
getName() - Method in interface org.gbif.api.model.collections.CollectionEntity
Descriptive name of an entity.
getName() - Method in class org.gbif.api.model.collections.duplicates.Duplicate
 
getName() - Method in class org.gbif.api.model.collections.Institution
Name or title of an institution.
getName() - Method in class org.gbif.api.model.collections.lookup.BaseEntityMatched
 
getName() - Method in interface org.gbif.api.model.collections.lookup.EntityMatched
 
getName() - Method in class org.gbif.api.model.collections.request.SearchRequest
 
getName() - Method in class org.gbif.api.model.collections.search.CollectionsSearchResponse
 
getName() - Method in class org.gbif.api.model.common.AbstractGbifUser
 
getName() - Method in class org.gbif.api.model.common.AppPrincipal
 
getName() - Method in class org.gbif.api.model.common.GbifUserPrincipal
 
getName() - Method in class org.gbif.api.model.common.search.Facet.Count
Name is the label/name/title used to distinguish this category in the list of counts.
getName() - Method in class org.gbif.api.model.common.User
Deprecated.
 
getName() - Method in class org.gbif.api.model.common.UserPrincipal
Deprecated.
 
getName() - Method in class org.gbif.api.model.occurrence.GadmFeature
 
getName() - Method in class org.gbif.api.model.pipelines.PipelineStep.MetricInfo
 
getName() - Method in class org.gbif.api.model.registry.eml.Collection
The official name of the Collection in the local language.
getName() - Method in class org.gbif.api.model.registry.eml.DataDescription
The name representing the data object being described.
getName() - Method in class org.gbif.api.model.registry.MachineTag
 
getName() - Method in class org.gbif.api.model.registry.search.collections.KeyCodeNameResult
 
getName() - Method in class org.gbif.api.v2.RankedName
 
getName() - Method in enum org.gbif.api.vocabulary.TagName
Actual machine tag name.
getNameForNewInstitution() - Method in class org.gbif.api.model.collections.merge.ConvertToCollectionParams
 
getNameForNewInstitutionForConvertedCollection() - Method in class org.gbif.api.model.collections.suggestions.InstitutionChangeSuggestion
 
getNameKey() - Method in class org.gbif.api.model.checklistbank.NameUsage
 
getNameKey() - Method in class org.gbif.api.model.checklistbank.search.NameUsageSearchResult
 
getNameKey() - Method in class org.gbif.api.model.checklistbank.search.NameUsageSuggestResult
 
getNames() - Method in enum org.gbif.api.model.occurrence.geo.DistanceUnit
 
getNamespace() - Method in class org.gbif.api.model.registry.MachineTag
 
getNamespace() - Method in enum org.gbif.api.vocabulary.TagName
Namespace to which belong this tag.
getNamespace() - Method in enum org.gbif.api.vocabulary.TagNamespace
 
getNameType() - Method in class org.gbif.api.model.checklistbank.NameUsage
 
getNameType() - Method in class org.gbif.api.model.checklistbank.search.NameUsageSearchResult
 
getNameUsagesCount() - Method in class org.gbif.api.model.registry.search.DatasetSearchResult
 
getNetworkKeys() - Method in class org.gbif.api.model.occurrence.VerbatimOccurrence
The GBIF Network associated to the publishing dataset.
getNetworkKeys() - Method in class org.gbif.api.model.registry.Dataset
Networks in which this dataset is a constituent.
getNetworkKeys() - Method in class org.gbif.api.model.registry.search.DatasetSearchResult
 
getNextSteps() - Method in class org.gbif.api.model.pipelines.WorkflowStep
 
getNode() - Method in class org.gbif.api.model.pipelines.PipelinesWorkflow.Graph.Edge
 
getNodeEdges(T) - Method in class org.gbif.api.model.pipelines.PipelinesWorkflow.Graph
 
getNodesQuantity() - Method in class org.gbif.api.model.pipelines.PipelinesWorkflow.Graph
 
getNomenclaturalStatus() - Method in class org.gbif.api.model.checklistbank.NameUsage
The status related to the conformance to the relevant rules of nomenclature.
getNomenclaturalStatus() - Method in class org.gbif.api.model.checklistbank.search.NameUsageSearchResult
 
getNomenclature() - Method in class org.gbif.api.v2.NameUsageMatch2
 
getNomStatus() - Method in class org.gbif.api.model.checklistbank.ParsedName
Any nomenclatoral remarks given in this name, e.g.
getNote() - Method in class org.gbif.api.model.checklistbank.NameUsageMatch
Optional notes on the matching.
getNote() - Method in class org.gbif.api.v2.NameUsageMatch2.Diagnostics
 
getNotes() - Method in class org.gbif.api.model.collections.Collection
 
getNotes() - Method in class org.gbif.api.model.collections.Contact
 
getNotho() - Method in class org.gbif.api.model.checklistbank.ParsedName
For hybrid names notho indicates which part of the name is considered a hybrid, i.e.
getNotificationAddresses() - Method in class org.gbif.api.model.occurrence.DownloadRequest
 
getNotificationAddressesAsString() - Method in class org.gbif.api.model.occurrence.DownloadRequest
Returns the notification addresses as single string.
getNotInCountries() - Method in class org.gbif.api.model.collections.duplicates.DuplicatesRequest
 
getNotInInstitutions() - Method in class org.gbif.api.model.collections.duplicates.DuplicatesRequest
 
getNubCoveragePct() - Method in class org.gbif.api.model.checklistbank.DatasetMetrics
 
getNubKey() - Method in class org.gbif.api.model.checklistbank.NameUsage
 
getNubKey() - Method in class org.gbif.api.model.checklistbank.search.NameUsageSearchResult
 
getNubKey() - Method in class org.gbif.api.model.checklistbank.search.NameUsageSuggestResult
 
getNubMatchingCount() - Method in class org.gbif.api.model.checklistbank.DatasetMetrics
 
getNumberDatasets() - Method in class org.gbif.api.model.occurrence.Download
Number of datasets in the download file.
getNumberDownloads() - Method in class org.gbif.api.model.occurrence.DownloadStatistics
 
getNumberOrganizations() - Method in class org.gbif.api.model.occurrence.Download
 
getNumberPublishingCountries() - Method in class org.gbif.api.model.occurrence.Download
 
getNumberRecords() - Method in class org.gbif.api.model.pipelines.PipelineStep
 
getNumberRecords() - Method in class org.gbif.api.model.registry.DatasetOccurrenceDownloadUsage
Number of records that the dataset has provided to the occurrence download.
getNumberSpecimens() - Method in class org.gbif.api.model.collections.Collection
 
getNumberSpecimens() - Method in class org.gbif.api.model.collections.Institution
Estimated number of specimens hosted by an institution.
getNumberSpecimens() - Method in class org.gbif.api.model.collections.request.SearchRequest
 
getNumByRank(Rank) - Method in class org.gbif.api.model.checklistbank.NameUsageMetrics
Gets the count of usages by a rank.
getNumChildren() - Method in class org.gbif.api.model.checklistbank.NameUsageMetrics
Returns the number of direct taxonomic elements under this usage.
getNumClass() - Method in class org.gbif.api.model.checklistbank.NameUsageMetrics
Returns the number of classes that are below this taxon.
getNumConstituents() - Method in class org.gbif.api.model.registry.Dataset
 
getNumConstituents() - Method in class org.gbif.api.model.registry.Network
 
getNumDescendants() - Method in class org.gbif.api.model.checklistbank.NameUsage
The number of all accepted taxonomic elements under this usage.
getNumDescendants() - Method in class org.gbif.api.model.checklistbank.NameUsageMetrics
The number of all accepted taxonomic elements under this usage.
getNumDescendants() - Method in class org.gbif.api.model.checklistbank.search.NameUsageSearchResult
 
getNumFamily() - Method in class org.gbif.api.model.checklistbank.NameUsageMetrics
Returns the number of families that are below this taxon.
getNumFound() - Method in class org.gbif.api.model.common.search.SpellCheckResponse.Suggestion
 
getNumGenus() - Method in class org.gbif.api.model.checklistbank.NameUsageMetrics
Returns the number of genus that are below this taxon.
getNumOccurrences() - Method in class org.gbif.api.model.checklistbank.search.NameUsageSearchResult
 
getNumOrder() - Method in class org.gbif.api.model.checklistbank.NameUsageMetrics
Returns the number of orders that are below this taxon.
getNumPhylum() - Method in class org.gbif.api.model.checklistbank.NameUsageMetrics
Returns the number of phyla that are below this taxon.
getNumPublishedDatasets() - Method in class org.gbif.api.model.registry.Organization
 
getNumSpecies() - Method in class org.gbif.api.model.checklistbank.NameUsageMetrics
Returns the number of species that are below this taxon.
getNumSubgenus() - Method in class org.gbif.api.model.checklistbank.NameUsageMetrics
Returns the number of distinct subgenera that are below this taxon.
getNumSynonyms() - Method in class org.gbif.api.model.checklistbank.NameUsageMetrics
Returns the number of related synonyms this usage possses.
getOccurrenceCount() - Method in class org.gbif.api.model.collections.Collection
 
getOccurrenceCount() - Method in class org.gbif.api.model.collections.Institution
 
getOccurrenceCount() - Method in class org.gbif.api.model.collections.request.SearchRequest
 
getOccurrenceId() - Method in class org.gbif.api.model.checklistbank.TypeSpecimen
Deprecated.
getOccurrenceId() - Method in class org.gbif.api.model.occurrence.OccurrenceRelation
 
getOccurrenceMappings() - Method in class org.gbif.api.model.collections.Collection
 
getOccurrenceMappings() - Method in class org.gbif.api.model.collections.Institution
 
getOccurrenceMappings() - Method in interface org.gbif.api.model.collections.OccurrenceMappeable
 
getOccurrenceReport() - Method in class org.gbif.api.model.crawler.DwcaValidationReport
 
getOccurrenceStatus() - Method in class org.gbif.api.model.occurrence.Occurrence
 
getOccurrenceWorkflow() - Static method in class org.gbif.api.model.pipelines.PipelinesWorkflow
 
getOffset() - Method in interface org.gbif.api.model.common.paging.Pageable
Defines how many items to skip before beginning to return records.
getOffset() - Method in class org.gbif.api.model.common.paging.PageableBase
Defines how many items to skip before beginning to return rows.
getOrder() - Method in class org.gbif.api.model.checklistbank.NameUsage
 
getOrder() - Method in class org.gbif.api.model.checklistbank.NameUsageMatch
 
getOrder() - Method in class org.gbif.api.model.checklistbank.search.NameUsageSearchResult
 
getOrder() - Method in class org.gbif.api.model.checklistbank.search.NameUsageSuggestResult
 
getOrder() - Method in interface org.gbif.api.model.common.LinneanClassification
Return the order for this usage.
getOrder() - Method in class org.gbif.api.model.occurrence.Occurrence
 
getOrderKey() - Method in class org.gbif.api.model.checklistbank.NameUsage
 
getOrderKey() - Method in class org.gbif.api.model.checklistbank.NameUsageMatch
 
getOrderKey() - Method in class org.gbif.api.model.checklistbank.search.NameUsageSearchResult
 
getOrderKey() - Method in class org.gbif.api.model.checklistbank.search.NameUsageSuggestResult
 
getOrderKey() - Method in interface org.gbif.api.model.common.LinneanClassificationKeys
Return the order key for this usage.
getOrderKey() - Method in class org.gbif.api.model.occurrence.Occurrence
 
getOrganismQuantity() - Method in class org.gbif.api.model.occurrence.Occurrence
A number or enumeration value for the quantity of organisms.
getOrganismQuantityType() - Method in class org.gbif.api.model.occurrence.Occurrence
The type of quantification system used for the quantity of organisms.
getOrganization() - Method in interface org.gbif.api.model.registry.Address
Institution name as part of the address
getOrganization() - Method in class org.gbif.api.model.registry.Contact
 
getOrganization() - Method in class org.gbif.api.model.registry.Network
Alias for the network title
getOrganization() - Method in class org.gbif.api.model.registry.Node
 
getOrganization() - Method in class org.gbif.api.model.registry.Organization
 
getOrganizationKey() - Method in class org.gbif.api.model.collections.InstitutionImportParams
 
getOrganizationKey() - Method in class org.gbif.api.model.registry.Installation
 
getOrigin() - Method in class org.gbif.api.model.checklistbank.NameUsage
The origin of this name usage record, i.e.
getOrigin() - Method in class org.gbif.api.model.checklistbank.search.NameUsageSearchResult
 
getOtherCatalogNumbers() - Method in class org.gbif.api.model.occurrence.Occurrence
 
getOtherCount(String) - Method in class org.gbif.api.model.checklistbank.DatasetMetrics
Get the metrics for other dynamic counts.
getOtherCount() - Method in class org.gbif.api.model.checklistbank.DatasetMetrics
 
getOwnerInstitutionCode() - Method in class org.gbif.api.model.collections.lookup.LookupParams
 
getPage() - Method in class org.gbif.api.model.collections.request.SearchRequest
 
getPage() - Method in class org.gbif.api.model.registry.search.RequestSearchParams
 
getPagesCrawled() - Method in class org.gbif.api.model.crawler.DatasetProcessStatus
Number of pages crawled in total.
getPagesFragmentedError() - Method in class org.gbif.api.model.crawler.DatasetProcessStatus
 
getPagesFragmentedSuccessful() - Method in class org.gbif.api.model.crawler.DatasetProcessStatus
Number of pages that have been fragmented.
getParameter() - Method in class org.gbif.api.model.predicate.IsNotNullPredicate
 
getParameter() - Method in class org.gbif.api.model.predicate.IsNullPredicate
 
getParameters() - Method in class org.gbif.api.model.common.search.SearchRequest
List of input parameters of the search operation.
getParent() - Method in class org.gbif.api.model.checklistbank.NameUsage
The scientific name of the parent.
getParent() - Method in class org.gbif.api.model.checklistbank.search.NameUsageSearchResult
 
getParent() - Method in class org.gbif.api.model.checklistbank.search.NameUsageSuggestResult
 
getParentCode() - Method in class org.gbif.api.model.collections.OccurrenceMapping
 
getParentDatasetKey() - Method in class org.gbif.api.model.registry.Dataset
 
getParentIdentifier() - Method in class org.gbif.api.model.registry.eml.Collection
The identifier for the parent collection for this sub-collection.
getParentKey() - Method in class org.gbif.api.model.checklistbank.NameUsage
Returns the immediate parent.
getParentKey() - Method in class org.gbif.api.model.checklistbank.search.NameUsageSearchResult
 
getParentKey() - Method in class org.gbif.api.model.checklistbank.search.NameUsageSuggestResult
 
getParsedName(int) - Method in interface org.gbif.api.service.checklistbank.NameUsageService
Gets the parsed name representation of a given name usage.
getParticipantSince() - Method in class org.gbif.api.model.registry.Node
4 digit year since the node participant first joined GBIF.
getParticipantTitle() - Method in class org.gbif.api.model.registry.Node
 
getParticipationStatus() - Method in class org.gbif.api.model.registry.Node
 
getPassword() - Method in class org.gbif.api.model.registry.Installation
Get the installation password.
getPassword() - Method in class org.gbif.api.model.registry.Organization
Get the organization password.
getPasswordHash() - Method in class org.gbif.api.model.common.GbifUser
 
getPasswordHash() - Method in class org.gbif.api.model.common.User
Deprecated.
 
getPathway() - Method in class org.gbif.api.model.occurrence.Occurrence
 
getPendingAbcdaDatasetProcesses() - Method in interface org.gbif.api.service.crawler.DatasetProcessService
 
getPendingCamtrapDpDatasetProcesses() - Method in interface org.gbif.api.service.crawler.DatasetProcessService
 
getPendingDwcaDatasetProcesses() - Method in interface org.gbif.api.service.crawler.DatasetProcessService
 
getPendingXmlDatasetProcesses() - Method in interface org.gbif.api.service.crawler.DatasetProcessService
 
getPercent() - Method in class org.gbif.api.model.registry.Grid
 
getPeriod() - Method in class org.gbif.api.model.registry.eml.temporal.VerbatimTimePeriod
 
getPersonalCollection() - Method in class org.gbif.api.model.collections.request.CollectionSearchRequest
 
getPhone() - Method in class org.gbif.api.model.collections.Collection
 
getPhone() - Method in interface org.gbif.api.model.collections.CollectionEntity
Phones of the entity
getPhone() - Method in class org.gbif.api.model.collections.Contact
 
getPhone() - Method in class org.gbif.api.model.collections.Institution
 
getPhone() - Method in interface org.gbif.api.model.registry.Address
phone in EML
getPhone() - Method in class org.gbif.api.model.registry.Contact
 
getPhone() - Method in class org.gbif.api.model.registry.Network
 
getPhone() - Method in class org.gbif.api.model.registry.Node
 
getPhone() - Method in class org.gbif.api.model.registry.Organization
 
getPhylum() - Method in class org.gbif.api.model.checklistbank.NameUsage
 
getPhylum() - Method in class org.gbif.api.model.checklistbank.NameUsageMatch
 
getPhylum() - Method in class org.gbif.api.model.checklistbank.search.NameUsageSearchResult
 
getPhylum() - Method in class org.gbif.api.model.checklistbank.search.NameUsageSuggestResult
 
getPhylum() - Method in interface org.gbif.api.model.common.LinneanClassification
Return the phylum for this usage.
getPhylum() - Method in class org.gbif.api.model.occurrence.Occurrence
 
getPhylumKey() - Method in class org.gbif.api.model.checklistbank.NameUsage
 
getPhylumKey() - Method in class org.gbif.api.model.checklistbank.NameUsageMatch
 
getPhylumKey() - Method in class org.gbif.api.model.checklistbank.search.NameUsageSearchResult
 
getPhylumKey() - Method in class org.gbif.api.model.checklistbank.search.NameUsageSuggestResult
 
getPhylumKey() - Method in interface org.gbif.api.model.common.LinneanClassificationKeys
Return the phylum key for this usage.
getPhylumKey() - Method in class org.gbif.api.model.occurrence.Occurrence
 
getPhysicalCity() - Method in class org.gbif.api.model.collections.duplicates.Duplicate
 
getPhysicalCountry() - Method in class org.gbif.api.model.collections.duplicates.Duplicate
 
getPipelineExecutions() - Method in class org.gbif.api.model.pipelines.IngestionProcess
 
getPipelineProcess(UUID, int) - Method in interface org.gbif.api.service.pipelines.PipelinesHistoryService
Gets the PipelineProcess identified by the dataset and attempt identifiers.
getPipelineStep(long) - Method in interface org.gbif.api.service.pipelines.PipelinesHistoryService
Gets the PipelineStep of the specified keys.
getPipelineStepsByExecutionKey(long) - Method in interface org.gbif.api.service.pipelines.PipelinesHistoryService
Gets the PipelineSteps list of the execution key.
getPipelinesVersion() - Method in class org.gbif.api.model.pipelines.PipelineStep
 
getPipelinesVersion() - Method in class org.gbif.api.model.pipelines.ws.SearchResult
 
getPoints() - Method in class org.gbif.api.model.registry.eml.geospatial.Polygon
 
getPosition() - Method in class org.gbif.api.model.collections.Contact
 
getPosition() - Method in class org.gbif.api.model.registry.Contact
 
getPostalCode() - Method in class org.gbif.api.model.collections.Address
International postal code of this address.
getPostalCode() - Method in class org.gbif.api.model.collections.Contact
 
getPostalCode() - Method in interface org.gbif.api.model.registry.Address
postalCode in EML
getPostalCode() - Method in class org.gbif.api.model.registry.Contact
 
getPostalCode() - Method in class org.gbif.api.model.registry.Network
 
getPostalCode() - Method in class org.gbif.api.model.registry.Node
 
getPostalCode() - Method in class org.gbif.api.model.registry.Organization
 
getPredefinedMixins() - Static method in class org.gbif.api.ws.mixin.Mixins
Return an immutable map of the predefined Jackson Mixins used by the web services.
getPredefinedMixins(Predicate<Class<?>>) - Static method in class org.gbif.api.ws.mixin.Mixins
Get an immutable map of the predefined Jackson Mixins after the provided keyFilter is applied.
getPredicate() - Method in class org.gbif.api.model.occurrence.PredicateDownloadRequest
 
getPredicate() - Method in class org.gbif.api.model.occurrence.search.OccurrencePredicateSearchRequest
 
getPredicate() - Method in class org.gbif.api.model.predicate.NotPredicate
 
getPredicates() - Method in class org.gbif.api.model.predicate.CompoundPredicate
Returns all the predicates this compound predicate is made out of in an immutable collection.
getPredicates() - Method in enum org.gbif.api.vocabulary.TagNamespace
Gets the list of TagName which belongs to the namespace.
getPrefix() - Method in class org.gbif.api.model.common.DOI
 
getPreparations() - Method in class org.gbif.api.model.occurrence.Occurrence
 
getPreservationTypes() - Method in class org.gbif.api.model.collections.Collection
Types of preservation mechanisms used for this collections.
getPreservationTypes() - Method in class org.gbif.api.model.collections.request.CollectionSearchRequest
 
getPrevious() - Method in class org.gbif.api.model.collections.suggestions.Change
 
getProcessingErrorType() - Method in class org.gbif.api.model.metrics.RecordError
Deprecated.
 
getProcessStateChecklist() - Method in class org.gbif.api.model.crawler.DatasetProcessStatus
 
getProcessStateOccurrence() - Method in class org.gbif.api.model.crawler.DatasetProcessStatus
 
getProcessStateSample() - Method in class org.gbif.api.model.crawler.DatasetProcessStatus
 
getProgrammeAcronym() - Method in class org.gbif.api.model.occurrence.VerbatimOccurrence
GBIF programme acronym/identifier.
getProject() - Method in class org.gbif.api.model.registry.Dataset
 
getProjectId() - Method in class org.gbif.api.model.occurrence.VerbatimOccurrence
GBIF project identifier.
getProjectIdentifier() - Method in class org.gbif.api.model.registry.search.DatasetSearchResult
 
getProParteKey() - Method in class org.gbif.api.model.checklistbank.NameUsage
Pro parte synonyms, i.e.
getProperties() - Method in class org.gbif.api.model.crawler.CrawlJob
Used to save protocol specific information (e.g.
getProperty(String) - Method in class org.gbif.api.model.crawler.CrawlJob
 
getProposed() - Method in class org.gbif.api.model.collections.suggestions.BaseChangeSuggestion
 
getProposed() - Method in interface org.gbif.api.model.collections.suggestions.ChangeSuggestion
 
getProposedBy() - Method in class org.gbif.api.model.collections.suggestions.BaseChangeSuggestion
 
getProposedBy() - Method in interface org.gbif.api.model.collections.suggestions.ChangeSuggestion
 
getProposerEmail() - Method in class org.gbif.api.model.collections.suggestions.BaseChangeSuggestion
 
getProposerEmail() - Method in interface org.gbif.api.model.collections.suggestions.ChangeSuggestion
 
getProtocol() - Method in class org.gbif.api.model.occurrence.VerbatimOccurrence
 
getProvince() - Method in class org.gbif.api.model.collections.Address
Province, region or area where this address is located.
getProvince() - Method in class org.gbif.api.model.collections.Collection
 
getProvince() - Method in class org.gbif.api.model.collections.Contact
 
getProvince() - Method in class org.gbif.api.model.collections.Institution
 
getProvince() - Method in interface org.gbif.api.model.registry.Address
administrativeArea in EML
getProvince() - Method in class org.gbif.api.model.registry.Contact
 
getProvince() - Method in class org.gbif.api.model.registry.Network
 
getProvince() - Method in class org.gbif.api.model.registry.Node
 
getProvince() - Method in class org.gbif.api.model.registry.Organization
 
getPubDate() - Method in class org.gbif.api.model.registry.Dataset
 
getPublishedByGbifRegion() - Method in class org.gbif.api.model.occurrence.VerbatimOccurrence
 
getPublishedIn() - Method in class org.gbif.api.model.checklistbank.NameUsage
Original publication for this name usage.
getPublishedIn() - Method in class org.gbif.api.model.checklistbank.search.NameUsageSearchResult
 
getPublisher() - Method in class org.gbif.api.model.common.MediaObject
An entity responsible for making the media item available.
getPublisherTitle() - Method in class org.gbif.api.model.registry.search.DatasetSearchResult
 
getPublishingCountry() - Method in class org.gbif.api.model.occurrence.VerbatimOccurrence
The country of the organization that publishes the dataset to which the occurrence belongs.
getPublishingCountry() - Method in class org.gbif.api.model.registry.search.DatasetSearchResult
 
getPublishingCountryCode() - Method in class org.gbif.api.model.registry.DatasetOccurrenceDownloadUsage
 
getPublishingOrganizationKey() - Method in class org.gbif.api.model.registry.Dataset
 
getPublishingOrganizationKey() - Method in class org.gbif.api.model.registry.search.DatasetSearchResult
 
getPublishingOrganizationTitle() - Method in class org.gbif.api.model.registry.search.DatasetSearchResult
 
getPublishingOrgKey() - Method in class org.gbif.api.model.occurrence.VerbatimOccurrence
 
getPurpose() - Method in class org.gbif.api.model.registry.Dataset
 
getQ() - Method in class org.gbif.api.model.collections.request.SearchRequest
 
getQ() - Method in class org.gbif.api.model.common.search.SearchRequest
Query parameter.
getQ() - Method in class org.gbif.api.model.predicate.FullTextSearchPredicate
Text query parameter.
getQFields() - Method in class org.gbif.api.model.common.search.SearchRequest
Defines whether to match against fields with scientific or vernacular names or both.
getQualityControl() - Method in class org.gbif.api.model.registry.eml.SamplingDescription
 
getRank() - Method in class org.gbif.api.model.checklistbank.NameUsage
Returns the rank for this usage.
getRank() - Method in class org.gbif.api.model.checklistbank.NameUsageMatch
 
getRank() - Method in class org.gbif.api.model.checklistbank.ParsedName
 
getRank() - Method in class org.gbif.api.model.checklistbank.search.NameUsageSearchResult
 
getRank() - Method in class org.gbif.api.model.checklistbank.search.NameUsageSuggestResult
 
getRank() - Method in class org.gbif.api.model.registry.eml.TaxonomicCoverage
 
getRank() - Method in class org.gbif.api.v2.RankedName
 
getRawOccurrencesPersistedError() - Method in class org.gbif.api.model.crawler.DatasetProcessStatus
 
getRawOccurrencesPersistedNew() - Method in class org.gbif.api.model.crawler.DatasetProcessStatus
 
getRawOccurrencesPersistedUnchanged() - Method in class org.gbif.api.model.crawler.DatasetProcessStatus
 
getRawOccurrencesPersistedUpdated() - Method in class org.gbif.api.model.crawler.DatasetProcessStatus
 
getReason() - Method in enum org.gbif.api.model.common.messaging.Response.StatusCode
 
getReasons() - Method in class org.gbif.api.model.collections.lookup.Match
 
getRecordCount() - Method in class org.gbif.api.model.registry.search.DatasetSearchResult
 
getRecordedBy() - Method in class org.gbif.api.model.checklistbank.TypeSpecimen
Deprecated.
getRecordedBy() - Method in class org.gbif.api.model.occurrence.Occurrence
 
getRecordedByIds() - Method in class org.gbif.api.model.occurrence.Occurrence
 
getRecordId() - Method in class org.gbif.api.model.metrics.RecordError
Deprecated.
 
getRecordsMissingOccurrenceId() - Method in class org.gbif.api.model.crawler.OccurrenceValidationReport
 
getRecordsWithInvalidTriplets() - Method in class org.gbif.api.model.crawler.OccurrenceValidationReport
 
getReferenceList() - Method in class org.gbif.api.model.checklistbank.NameUsageContainer
 
getReferences() - Method in class org.gbif.api.model.checklistbank.NameUsage
A URI link or reference to the source of this record, the record's "homepage".
getReferences() - Method in class org.gbif.api.model.common.MediaObject
 
getReferences() - Method in class org.gbif.api.model.occurrence.Occurrence
An external link to more details, the records "homepage".
getRegistryKey() - Method in class org.gbif.api.util.DatasetKey
A registered UUID of either a dataset or the network of origin in the case of external datasets.
getRelatedOccurrenceId() - Method in class org.gbif.api.model.occurrence.OccurrenceRelation
 
getRelatedResponses() - Method in class org.gbif.api.model.common.messaging.ResponseChain
 
getRelatedTerms() - Method in interface org.gbif.api.vocabulary.InterpretationRemark
Set containing the Term considered to flag this remark.
getRelatedTerms() - Method in enum org.gbif.api.vocabulary.NameUsageIssue
 
getRelatedTerms() - Method in enum org.gbif.api.vocabulary.OccurrenceIssue
 
getRelations() - Method in class org.gbif.api.model.occurrence.Occurrence
 
getRelativeOrganismQuantity() - Method in class org.gbif.api.model.occurrence.Occurrence
Calculated filed organismQuantity / sampleSizeValue, if the type is identical
getRemarks() - Method in class org.gbif.api.model.checklistbank.Distribution
Additional notes on the distribution.
getRemarks() - Method in class org.gbif.api.model.checklistbank.NameUsage
 
getRemarks() - Method in class org.gbif.api.model.checklistbank.ParsedName
Any further remarks found
getRemarks() - Method in class org.gbif.api.model.checklistbank.Reference
Annotation of taxon-specific information related to the referenced publication.
getRemarks() - Method in class org.gbif.api.model.occurrence.MeasurementOrFact
 
getRemarks() - Method in class org.gbif.api.model.occurrence.OccurrenceRelation
 
getRemarks() - Method in class org.gbif.api.model.pipelines.PipelineExecution
 
getReplacedBy() - Method in class org.gbif.api.model.collections.Collection
 
getReplacedBy() - Method in interface org.gbif.api.model.collections.CollectionEntity
Replacement of the entity (if applies).
getReplacedBy() - Method in class org.gbif.api.model.collections.Institution
 
getReplacedBy() - Method in class org.gbif.api.model.collections.request.SearchRequest
 
getReplacementEntityKey() - Method in class org.gbif.api.model.collections.merge.MergeParams
 
getRequest() - Method in class org.gbif.api.model.occurrence.Download
Request that originated the download.
getRerunReason() - Method in class org.gbif.api.model.pipelines.PipelineExecution
 
getRerunReason() - Method in class org.gbif.api.model.pipelines.ws.SearchResult
 
getResourceCreator() - Method in class org.gbif.api.util.ContactAdapter
Get the ResourceCreator Contact.
getResponseStatus() - Method in class org.gbif.api.model.pipelines.RunPipelineResponse
 
getResult() - Method in class org.gbif.api.model.registry.metasync.MetasyncHistory
Result of the metasync operation.
getResult(String) - Method in interface org.gbif.api.service.occurrence.DownloadRequestService
 
getResultFile(String) - Method in interface org.gbif.api.service.occurrence.DownloadRequestService
 
getResultFile(Download) - Method in interface org.gbif.api.service.occurrence.DownloadRequestService
 
getResults() - Method in class org.gbif.api.model.common.paging.PagingResponse
Gets the list of results.
getRights() - Method in class org.gbif.api.model.registry.Dataset
Any kind of (copy)rights/IPR statements that apply to the datasets data.
getRightsHolder() - Method in class org.gbif.api.model.common.MediaObject
 
getRoles() - Method in class org.gbif.api.model.common.AbstractGbifUser
 
getRoles() - Method in class org.gbif.api.model.common.User
Deprecated.
 
getRoles() - Method in class org.gbif.api.model.registry.CitationContact
Roles or contact type of this contact.
getRootException() - Method in class org.gbif.api.model.common.messaging.Response
 
getRootNodesFor(Set<T>) - Method in class org.gbif.api.model.pipelines.PipelinesWorkflow.Graph
 
getRowNumbersMissingId() - Method in class org.gbif.api.model.crawler.GenericValidationReport
 
getRowType() - Method in enum org.gbif.api.vocabulary.Extension
 
getRunner() - Method in class org.gbif.api.model.pipelines.PipelineStep
 
getRunningDatasetProcesses() - Method in interface org.gbif.api.service.crawler.DatasetProcessService
 
getRunningExecutionKey(UUID) - Method in interface org.gbif.api.service.pipelines.PipelinesHistoryService
Gets execution key for running dataset
getRunningPipelineProcess(Pageable) - Method in interface org.gbif.api.service.pipelines.PipelinesHistoryService
Returns information about all running pipelines executions
getSameCity() - Method in class org.gbif.api.model.collections.duplicates.DuplicatesRequest
 
getSameCode() - Method in class org.gbif.api.model.collections.duplicates.DuplicatesRequest
 
getSameCountry() - Method in class org.gbif.api.model.collections.duplicates.DuplicatesRequest
 
getSameFuzzyName() - Method in class org.gbif.api.model.collections.duplicates.DuplicatesRequest
 
getSameInstitution() - Method in class org.gbif.api.model.collections.duplicates.DuplicatesRequest
 
getSameName() - Method in class org.gbif.api.model.collections.duplicates.DuplicatesRequest
 
getSampleSizeUnit() - Method in class org.gbif.api.model.occurrence.Occurrence
The unit of measurement of the size (time duration, length, area, or volume) of a sample in a sampling event.
getSampleSizeValue() - Method in class org.gbif.api.model.occurrence.Occurrence
A numeric value for a measurement of the size (time duration, length, area, or volume) of a sample in a sampling event.
getSampling() - Method in class org.gbif.api.model.registry.eml.SamplingDescription
 
getSamplingDescription() - Method in class org.gbif.api.model.registry.Dataset
 
getSamplingProtocol() - Method in class org.gbif.api.model.occurrence.Occurrence
 
getSchema() - Method in interface org.gbif.api.service.metrics.CubeService
Provides the list of rollups thus specifying the available combinations of addressable dimensions for a cube.
getSchemeURI() - Method in enum org.gbif.api.util.validators.identifierschemes.IdentifierScheme
 
getScientificName() - Method in class org.gbif.api.model.checklistbank.NameUsage
The scientific name (with date and authorship information if applicable).
getScientificName() - Method in class org.gbif.api.model.checklistbank.NameUsageMatch
The scientific name of the matched name usage.
getScientificName() - Method in class org.gbif.api.model.checklistbank.ParsedName
The exact verbatim, full scientific name as given before parsing.
getScientificName() - Method in class org.gbif.api.model.checklistbank.search.NameUsageSearchResult
 
getScientificName() - Method in class org.gbif.api.model.checklistbank.search.NameUsageSuggestResult
 
getScientificName() - Method in class org.gbif.api.model.checklistbank.TypeSpecimen
The scientific name originally used for the specimen, species or genus.
getScientificName() - Method in class org.gbif.api.model.occurrence.Occurrence
The scientific name for taxonKey from the GBIF backbone.
getScientificName() - Method in class org.gbif.api.model.registry.eml.TaxonomicCoverage
 
getSelfLink() - Method in class org.gbif.api.model.collections.lookup.BaseEntityMatched
 
getSelfLink() - Method in interface org.gbif.api.model.collections.lookup.EntityMatched
 
getSendNotification() - Method in class org.gbif.api.model.occurrence.DownloadRequest
 
getSensu() - Method in class org.gbif.api.model.checklistbank.ParsedName
Taxon concept references as part of the name, e.g.
getSettings() - Method in class org.gbif.api.model.common.AbstractGbifUser
Gets the settings which may be empty but never null.
getSettings() - Method in class org.gbif.api.model.common.User
Deprecated.
Gets the settings which may be empty but never null.
getSeverity() - Method in interface org.gbif.api.vocabulary.InterpretationRemark
Returns the default severity of this InterpretationRemark.
getSeverity() - Method in enum org.gbif.api.vocabulary.NameUsageIssue
 
getSeverity() - Method in enum org.gbif.api.vocabulary.OccurrenceIssue
 
getSex() - Method in class org.gbif.api.model.checklistbank.VernacularName
The sex (gender) of the taxon for which the vernacular name applies when the vernacular name is limited to a specific gender of a species.
getSex() - Method in class org.gbif.api.model.occurrence.Occurrence
 
getShuffle() - Method in class org.gbif.api.model.occurrence.search.OccurrenceSearchRequest
This flag allows to sort the results in a random order by specifying a seed.
getSize() - Method in class org.gbif.api.model.occurrence.Download
Size in bytes of the produced file.
getSizeInMillimeter() - Method in class org.gbif.api.model.checklistbank.SpeciesProfile
Maximum observed size of an organism in millimetres.
getSnippet() - Method in class org.gbif.api.model.collections.search.CollectionsSearchResponse.Match
 
getSortBy() - Method in class org.gbif.api.model.collections.request.SearchRequest
 
getSortOrder() - Method in class org.gbif.api.model.collections.request.SearchRequest
 
getSource() - Method in class org.gbif.api.model.checklistbank.Description
Source reference of this description, a URL or full publication citation.
getSource() - Method in class org.gbif.api.model.checklistbank.Distribution
Source reference for this distribution record.
getSource() - Method in interface org.gbif.api.model.checklistbank.NameUsageExtension
 
getSource() - Method in class org.gbif.api.model.checklistbank.Reference
 
getSource() - Method in class org.gbif.api.model.checklistbank.SpeciesProfile
 
getSource() - Method in class org.gbif.api.model.checklistbank.TypeSpecimen
The source.
getSource() - Method in class org.gbif.api.model.checklistbank.VernacularName
Bibliographic citation referencing a source where the vernacular name refers to the cited species.
getSource() - Method in class org.gbif.api.model.collections.MasterSourceMetadata
 
getSource() - Method in class org.gbif.api.model.common.MediaObject
 
getSource() - Method in class org.gbif.api.model.occurrence.Download
Source of the download to determine how the download was originated.
getSource() - Method in class org.gbif.api.v2.NameUsageMatch2.Nomenclature
 
getSourceableParts() - Method in class org.gbif.api.model.collections.SourceableField.Source
 
getSourceId() - Method in class org.gbif.api.model.collections.MasterSourceMetadata
 
getSources() - Method in class org.gbif.api.model.collections.SourceableField
 
getSourceTaxonKey() - Method in class org.gbif.api.model.checklistbank.Description
 
getSourceTaxonKey() - Method in class org.gbif.api.model.checklistbank.Distribution
 
getSourceTaxonKey() - Method in class org.gbif.api.model.checklistbank.NameUsage
For backbone taxa the source taxon key refers to the original name usage that was used during backbone building and is the primary reason that this taxon exists in the backbone.
getSourceTaxonKey() - Method in interface org.gbif.api.model.checklistbank.NameUsageExtension
If the source is another name usage this is the taxonKey of that usage.
getSourceTaxonKey() - Method in class org.gbif.api.model.checklistbank.NameUsageMediaObject
 
getSourceTaxonKey() - Method in class org.gbif.api.model.checklistbank.Reference
 
getSourceTaxonKey() - Method in class org.gbif.api.model.checklistbank.SpeciesProfile
 
getSourceTaxonKey() - Method in class org.gbif.api.model.checklistbank.TypeSpecimen
 
getSourceTaxonKey() - Method in class org.gbif.api.model.checklistbank.VernacularName
 
getSpecies() - Method in class org.gbif.api.model.checklistbank.NameUsage
 
getSpecies() - Method in class org.gbif.api.model.checklistbank.NameUsageMatch
 
getSpecies() - Method in class org.gbif.api.model.checklistbank.search.NameUsageSearchResult
 
getSpecies() - Method in class org.gbif.api.model.checklistbank.search.NameUsageSuggestResult
 
getSpecies() - Method in interface org.gbif.api.model.common.LinneanClassification
Return the species for this usage.
getSpecies() - Method in class org.gbif.api.model.occurrence.Occurrence
The corresponding scientific name of the speciesKey from the GBIF backbone.
getSpeciesKey() - Method in class org.gbif.api.model.checklistbank.NameUsage
 
getSpeciesKey() - Method in class org.gbif.api.model.checklistbank.NameUsageMatch
 
getSpeciesKey() - Method in class org.gbif.api.model.checklistbank.search.NameUsageSearchResult
 
getSpeciesKey() - Method in class org.gbif.api.model.checklistbank.search.NameUsageSuggestResult
 
getSpeciesKey() - Method in interface org.gbif.api.model.common.LinneanClassificationKeys
Return the species key for this usage.
getSpeciesKey() - Method in class org.gbif.api.model.occurrence.Occurrence
The accepted species for this occurrence.
getSpeciesProfiles() - Method in class org.gbif.api.model.checklistbank.NameUsageContainer
 
getSpecificEpithet() - Method in class org.gbif.api.model.checklistbank.ParsedName
 
getSpecificEpithet() - Method in class org.gbif.api.model.occurrence.Occurrence
 
getSpecimenPreservationMethod() - Method in class org.gbif.api.model.registry.eml.Collection
Picklist keyword indicating the process or technique used to prevent physical deterioration of non-living collections.
getSpellCheckCount() - Method in class org.gbif.api.model.common.search.SearchRequest
 
getSpellCheckResponse() - Method in class org.gbif.api.model.common.search.SearchResponse
 
getSql() - Method in class org.gbif.api.model.occurrence.SqlDownloadRequest
 
getStart() - Method in class org.gbif.api.model.registry.eml.temporal.DateRange
 
getStartDayOfYear() - Method in class org.gbif.api.model.checklistbank.Distribution
Seasonal temporal subcontext within the eventDate context.
getStartDayOfYear() - Method in class org.gbif.api.model.occurrence.Occurrence
The earliest integer day of the year of the event.
getStarted() - Method in class org.gbif.api.model.pipelines.PipelineStep
 
getStartedCrawling() - Method in class org.gbif.api.model.crawler.DatasetProcessStatus
Timestamp of when the crawl was actually started by a crawler.
getState() - Method in class org.gbif.api.model.pipelines.PipelineStep
 
getStateProvince() - Method in class org.gbif.api.model.occurrence.Occurrence
 
getStatus() - Method in class org.gbif.api.model.checklistbank.Distribution
Term describing the occurrence status of the organism in the given area based on how frequent the species occurs.
getStatus() - Method in class org.gbif.api.model.checklistbank.NameUsageMatch
The taxonomic status of the backbone usage.
getStatus() - Method in class org.gbif.api.model.checklistbank.search.NameUsageSuggestResult
 
getStatus() - Method in class org.gbif.api.model.collections.lookup.Match
 
getStatus() - Method in class org.gbif.api.model.collections.suggestions.BaseChangeSuggestion
 
getStatus() - Method in interface org.gbif.api.model.collections.suggestions.ChangeSuggestion
 
getStatus() - Method in class org.gbif.api.model.common.DoiData
 
getStatus() - Method in class org.gbif.api.model.common.messaging.Response
 
getStatus() - Method in class org.gbif.api.model.occurrence.Download
 
getStatus() - Method in class org.gbif.api.v2.NameUsageMatch2.Diagnostics
 
getStatusCode() - Method in class org.gbif.api.model.common.messaging.Response
 
getStepFinished() - Method in class org.gbif.api.model.pipelines.ws.SearchResult
 
getSteps() - Method in class org.gbif.api.model.pipelines.PipelineExecution
 
getSteps() - Method in class org.gbif.api.model.pipelines.RunPipelineResponse
 
getStepsFailed() - Method in class org.gbif.api.model.pipelines.RunPipelineResponse
 
getStepStarted() - Method in class org.gbif.api.model.pipelines.ws.SearchResult
 
getStepState() - Method in class org.gbif.api.model.pipelines.ws.SearchResult
 
getStepsToRun() - Method in class org.gbif.api.model.pipelines.PipelineExecution
 
getStepType() - Method in class org.gbif.api.model.pipelines.WorkflowStep
 
getStepType() - Method in class org.gbif.api.model.pipelines.ws.SearchResult
 
getStrain() - Method in class org.gbif.api.model.checklistbank.ParsedName
The strain or isolate name.
getStudyAreaDescription() - Method in class org.gbif.api.model.registry.eml.Project
 
getStudyExtent() - Method in class org.gbif.api.model.registry.eml.SamplingDescription
 
getSubgenus() - Method in class org.gbif.api.model.checklistbank.NameUsage
 
getSubgenus() - Method in class org.gbif.api.model.checklistbank.NameUsageMatch
 
getSubgenus() - Method in class org.gbif.api.model.checklistbank.search.NameUsageSearchResult
 
getSubgenus() - Method in class org.gbif.api.model.checklistbank.search.NameUsageSuggestResult
 
getSubgenus() - Method in interface org.gbif.api.model.common.LinneanClassification
Return the canonical subgenus name for this usage.
getSubgenus() - Method in class org.gbif.api.model.occurrence.Occurrence
 
getSubgenusKey() - Method in class org.gbif.api.model.checklistbank.NameUsage
 
getSubgenusKey() - Method in class org.gbif.api.model.checklistbank.NameUsageMatch
 
getSubgenusKey() - Method in class org.gbif.api.model.checklistbank.search.NameUsageSearchResult
 
getSubgenusKey() - Method in class org.gbif.api.model.checklistbank.search.NameUsageSuggestResult
 
getSubgenusKey() - Method in interface org.gbif.api.model.common.LinneanClassificationKeys
Return the subgenus key for this usage.
getSubgenusKey() - Method in class org.gbif.api.model.occurrence.Occurrence
 
getSubtype() - Method in class org.gbif.api.model.registry.Dataset
 
getSubtype() - Method in class org.gbif.api.model.registry.search.DatasetSearchResult
 
getSubtype() - Method in class org.gbif.api.model.registry.search.DatasetSuggestResult
 
getSuffix() - Method in class org.gbif.api.model.common.DOI
 
getSuggested() - Method in class org.gbif.api.model.collections.suggestions.Change
 
getSuggestedEntity() - Method in class org.gbif.api.model.collections.suggestions.BaseChangeSuggestion
 
getSuggestedEntity() - Method in interface org.gbif.api.model.collections.suggestions.ChangeSuggestion
 
getSuggestion(String) - Method in class org.gbif.api.model.common.search.SpellCheckResponse
 
getSuggestions() - Method in class org.gbif.api.model.common.search.SpellCheckResponse
 
getSyncDate() - Method in class org.gbif.api.model.registry.metasync.MetasyncHistory
Date when the metasync operation was executed.
getSynonyms() - Method in class org.gbif.api.model.checklistbank.NameUsageContainer
 
getSynonymsCount() - Method in class org.gbif.api.model.checklistbank.DatasetMetrics
 
getSystemSettings() - Method in class org.gbif.api.model.common.AbstractGbifUser
Gets the settings which may be empty but never null.
getTags() - Method in class org.gbif.api.model.collections.Collection
(Meta)Tags or labels.
getTags() - Method in class org.gbif.api.model.collections.Institution
 
getTags() - Method in class org.gbif.api.model.registry.Dataset
 
getTags() - Method in class org.gbif.api.model.registry.Installation
 
getTags() - Method in class org.gbif.api.model.registry.Network
 
getTags() - Method in class org.gbif.api.model.registry.Node
 
getTags() - Method in class org.gbif.api.model.registry.Organization
 
getTags() - Method in interface org.gbif.api.model.registry.Taggable
 
getTarget() - Method in class org.gbif.api.model.common.DoiData
 
getTargetUrl() - Method in class org.gbif.api.model.crawler.CrawlJob
 
getTaxonID() - Method in class org.gbif.api.model.checklistbank.NameUsage
The original taxonID of the name usage as found in the source.
getTaxonID() - Method in class org.gbif.api.model.checklistbank.search.NameUsageSearchResult
 
getTaxonKey() - Method in class org.gbif.api.model.checklistbank.Description
The name usage "taxon" key this description belongs to.
getTaxonKey() - Method in class org.gbif.api.model.checklistbank.Distribution
The name usage "taxon" key this description belongs to.
getTaxonKey() - Method in interface org.gbif.api.model.checklistbank.NameUsageExtension
The name usage "taxon" key this extension record belongs to.
getTaxonKey() - Method in class org.gbif.api.model.checklistbank.NameUsageMediaObject
The name usage "taxon" key this description belongs to.
getTaxonKey() - Method in class org.gbif.api.model.checklistbank.Reference
The name usage "taxon" key this description belongs to.
getTaxonKey() - Method in class org.gbif.api.model.checklistbank.SpeciesProfile
The name usage "taxon" key this species profile belongs to.
getTaxonKey() - Method in class org.gbif.api.model.checklistbank.TypeSpecimen
The name usage "taxon" key this description belongs to.
getTaxonKey() - Method in class org.gbif.api.model.checklistbank.VernacularName
The name usage "taxon" key to which this vernacular name belongs.
getTaxonKey() - Method in class org.gbif.api.model.occurrence.Occurrence
The best matching, accepted GBIF backbone name usage representing this occurrence.
getTaxonomicCoverage() - Method in class org.gbif.api.model.collections.Collection
 
getTaxonomicCoverages() - Method in class org.gbif.api.model.registry.Dataset
 
getTaxonomicDescription() - Method in class org.gbif.api.model.collections.Institution
Taxonomic description of the collections maintained by an institution.
getTaxonomicExpertise() - Method in class org.gbif.api.model.collections.Contact
 
getTaxonomicStatus() - Method in class org.gbif.api.model.checklistbank.NameUsage
The taxonomic status of the name usage.
getTaxonomicStatus() - Method in class org.gbif.api.model.checklistbank.search.NameUsageSearchResult
 
getTaxonomicStatus() - Method in class org.gbif.api.model.occurrence.Occurrence
The status of the use of the scientificName as a label for a taxon.
getTaxonRank() - Method in class org.gbif.api.model.checklistbank.TypeSpecimen
The rank of the taxon bearing the scientific name.
getTaxonRank() - Method in class org.gbif.api.model.occurrence.Occurrence
 
getTemporal() - Method in class org.gbif.api.model.checklistbank.Distribution
Relevant temporal context for this entire distribution record including all properties preferably given as a year range or single year on which the distribution record is valid.
getTemporalCoverages() - Method in class org.gbif.api.model.registry.Dataset
 
getTerminalEpithet() - Method in class org.gbif.api.model.checklistbank.ParsedName
 
getText() - Method in class org.gbif.api.model.registry.Citation
 
getThesaurus() - Method in class org.gbif.api.model.registry.eml.KeywordCollection
 
getThreatStatus() - Method in class org.gbif.api.model.checklistbank.Distribution
Threat status of a species as defined by IUCN (http://www.iucnredlist.org/static/categories_criteria_3_1#categories).
getThreatStatus() - Method in class org.gbif.api.model.checklistbank.NameUsageContainer
Convenience method that analyzes all distribution records and returns the distinct list of known threat status.
getThreatStatuses() - Method in class org.gbif.api.model.checklistbank.search.NameUsageSearchResult
 
getTitle() - Method in class org.gbif.api.model.checklistbank.Reference
Deprecated.
getTitle() - Method in class org.gbif.api.model.common.Identifier
The optional title of an identifier, mostly for linking.
getTitle() - Method in class org.gbif.api.model.common.MediaObject
The media item title.
getTitle() - Method in class org.gbif.api.model.registry.Dataset
 
getTitle() - Method in class org.gbif.api.model.registry.eml.Project
 
getTitle() - Method in class org.gbif.api.model.registry.Installation
 
getTitle() - Method in class org.gbif.api.model.registry.Network
 
getTitle() - Method in interface org.gbif.api.model.registry.NetworkEntity
 
getTitle() - Method in class org.gbif.api.model.registry.Node
 
getTitle() - Method in class org.gbif.api.model.registry.Organization
 
getTitle() - Method in class org.gbif.api.model.registry.search.DatasetSearchResult
 
getTitle() - Method in class org.gbif.api.model.registry.search.DatasetSuggestResult
 
getTitle() - Method in class org.gbif.api.model.registry.search.KeyTitleResult
 
getTitle() - Method in enum org.gbif.api.vocabulary.Continent
 
getTitle() - Method in enum org.gbif.api.vocabulary.Country
 
getTitle() - Method in enum org.gbif.api.vocabulary.NomenclaturalCode
 
getTitleEnglish() - Method in enum org.gbif.api.vocabulary.Language
 
getTitleNative() - Method in enum org.gbif.api.vocabulary.Language
 
getTitles(Collection<UUID>) - Method in interface org.gbif.api.service.registry.NetworkEntityService
Retrieves all titles for the requested entity keys in one go
getTo() - Method in class org.gbif.api.util.IsoDateInterval
 
getToc() - Method in class org.gbif.api.model.checklistbank.TableOfContents
 
getToc(int) - Method in interface org.gbif.api.service.checklistbank.DescriptionService
Returns a table of content for all available descriptions of a name usage.
getTotalCount() - Method in class org.gbif.api.model.registry.Grid
 
getTotalRecords() - Method in class org.gbif.api.model.occurrence.Download
Number of occurrence records in the download file.
getTotalRecords() - Method in class org.gbif.api.model.occurrence.DownloadStatistics
 
getType() - Method in class org.gbif.api.model.checklistbank.Description
Returns the type used to categorize paragraphs of a taxon description.
getType() - Method in class org.gbif.api.model.checklistbank.ParsedName
A coarse classification of names helping to deal with different syntactical name string structures.
getType() - Method in class org.gbif.api.model.checklistbank.Reference
Used to assign a bibliographic reference to list of taxonomic or nomenclatural categories.
getType() - Method in class org.gbif.api.model.collections.Institution
Describes the main activity of an institution.
getType() - Method in class org.gbif.api.model.collections.request.InstitutionSearchRequest
 
getType() - Method in class org.gbif.api.model.collections.search.CollectionsSearchResponse
 
getType() - Method in class org.gbif.api.model.collections.suggestions.BaseChangeSuggestion
 
getType() - Method in interface org.gbif.api.model.collections.suggestions.ChangeSuggestion
 
getType() - Method in class org.gbif.api.model.collections.UserId
 
getType() - Method in class org.gbif.api.model.common.Identifier
Type of identifier.
getType() - Method in class org.gbif.api.model.common.MediaObject
 
getType() - Method in class org.gbif.api.model.metrics.cube.Dimension
 
getType() - Method in class org.gbif.api.model.occurrence.AgentIdentifier
 
getType() - Method in class org.gbif.api.model.occurrence.DownloadRequest
 
getType() - Method in class org.gbif.api.model.occurrence.MeasurementOrFact
 
getType() - Method in class org.gbif.api.model.occurrence.OccurrenceRelation
 
getType() - Method in class org.gbif.api.model.pipelines.PipelineStep
 
getType() - Method in class org.gbif.api.model.registry.Contact
 
getType() - Method in class org.gbif.api.model.registry.Dataset
 
getType() - Method in class org.gbif.api.model.registry.eml.curatorial.CuratorialUnit
 
getType() - Method in class org.gbif.api.model.registry.eml.temporal.VerbatimTimePeriod
 
getType() - Method in class org.gbif.api.model.registry.Endpoint
 
getType() - Method in class org.gbif.api.model.registry.Identifier
 
getType() - Method in class org.gbif.api.model.registry.Installation
 
getType() - Method in class org.gbif.api.model.registry.Metadata
 
getType() - Method in class org.gbif.api.model.registry.Node
 
getType() - Method in class org.gbif.api.model.registry.search.DatasetSearchResult
 
getType() - Method in class org.gbif.api.model.registry.search.DatasetSuggestResult
 
getTypeDesignatedBy() - Method in class org.gbif.api.model.checklistbank.TypeSpecimen
The citation of the publication where the type designation is found.
getTypeDesignationType() - Method in class org.gbif.api.model.checklistbank.TypeSpecimen
The reason why this specimen or name is designated as a type.
getTypeSpecimenCount() - Method in class org.gbif.api.model.collections.Collection
 
getTypeSpecimenCount() - Method in class org.gbif.api.model.collections.Institution
 
getTypeSpecimenCount() - Method in class org.gbif.api.model.collections.request.SearchRequest
 
getTypeSpecimens() - Method in class org.gbif.api.model.checklistbank.NameUsageContainer
 
getTypeStatus() - Method in class org.gbif.api.model.checklistbank.TypeSpecimen
Deprecated.
getTypeStatus() - Method in class org.gbif.api.model.occurrence.Occurrence
 
getTypeVerbatim() - Method in class org.gbif.api.model.registry.eml.curatorial.CuratorialUnit
 
getTypifiedName() - Method in class org.gbif.api.model.occurrence.Occurrence
The scientific name the type status of this specimen applies to.
getUniqueOccurrenceIds() - Method in class org.gbif.api.model.crawler.OccurrenceValidationReport
 
getUniqueTriplets() - Method in class org.gbif.api.model.crawler.OccurrenceValidationReport
 
getUnit() - Method in class org.gbif.api.model.occurrence.geo.DistanceUnit.Distance
 
getUnit() - Method in class org.gbif.api.model.occurrence.MeasurementOrFact
 
getUpper() - Method in class org.gbif.api.model.registry.eml.curatorial.CuratorialUnitComposite
 
getUpper() - Method in class org.gbif.api.model.registry.eml.curatorial.CuratorialUnitRange
 
getUrl() - Method in class org.gbif.api.model.common.DOI
getUrl() - Method in class org.gbif.api.model.registry.eml.DataDescription
The URL to download the resource in the mentioned format.
getUrl() - Method in class org.gbif.api.model.registry.Endpoint
 
getUsage() - Method in class org.gbif.api.v2.NameUsageMatch2
 
getUsageKey() - Method in class org.gbif.api.model.checklistbank.NameUsageMatch
The name usage key of the name usage that has been matched.
getUsagesCount() - Method in class org.gbif.api.model.checklistbank.DatasetMetrics
 
getUser() - Method in class org.gbif.api.model.common.GbifUserPrincipal
 
getUser() - Method in class org.gbif.api.model.common.UserPrincipal
Deprecated.
 
getUserId() - Method in class org.gbif.api.model.registry.CitationContact
GBIF Portal users associated to this contact.
getUserId() - Method in class org.gbif.api.model.registry.Contact
 
getUserIds() - Method in class org.gbif.api.model.collections.Contact
 
getUserName() - Method in class org.gbif.api.model.common.AbstractGbifUser
The unique, immutable drupal user account name.
getUserName() - Method in class org.gbif.api.model.common.User
Deprecated.
The unique, immutable drupal user account name.
getValidatorWorkflow() - Static method in class org.gbif.api.model.pipelines.PipelinesWorkflow
 
getValue() - Method in class org.gbif.api.model.occurrence.AgentIdentifier
 
getValue() - Method in class org.gbif.api.model.occurrence.geo.DistanceUnit.Distance
 
getValue() - Method in class org.gbif.api.model.occurrence.MeasurementOrFact
 
getValue() - Method in class org.gbif.api.model.pipelines.PipelineStep.MetricInfo
 
getValue() - Method in class org.gbif.api.model.predicate.RangePredicate
 
getValue() - Method in class org.gbif.api.model.predicate.SimplePredicate
 
getValue() - Method in class org.gbif.api.model.registry.MachineTag
 
getValue() - Method in class org.gbif.api.model.registry.Tag
 
getValueOfFirst(Map<Term, String>, Term...) - Static method in class org.gbif.dwc.terms.Terms
Tries various terms in given order until it finds a non empty value.
getValues() - Method in class org.gbif.api.model.predicate.InPredicate
 
getVerbatim() - Method in class org.gbif.api.model.common.InterpretedField
Deprecated.
 
getVerbatim(int) - Method in interface org.gbif.api.service.checklistbank.NameUsageService
Returns the verbatim data for the usage or null if its a generated usage having no verbatim data.
getVerbatim(Long) - Method in interface org.gbif.api.service.occurrence.OccurrenceService
Attempt to find the verbatim values for an occurrence matching the passed key.
getVerbatimEventDate() - Method in class org.gbif.api.model.checklistbank.TypeSpecimen
Deprecated.
getVerbatimExtensions() - Method in class org.gbif.api.model.occurrence.PredicateDownloadRequest
Requested verbatimExtensions for this download.
getVerbatimField(Term) - Method in class org.gbif.api.model.occurrence.VerbatimOccurrence
Get the value of a specific field (Term).
getVerbatimFields() - Method in class org.gbif.api.model.occurrence.VerbatimOccurrence
A map holding all verbatim core terms.
getVerbatimLabel() - Method in class org.gbif.api.model.checklistbank.TypeSpecimen
Deprecated.
getVerbatimLatitude() - Method in class org.gbif.api.model.checklistbank.TypeSpecimen
Deprecated.
getVerbatimLongitude() - Method in class org.gbif.api.model.checklistbank.TypeSpecimen
Deprecated.
getVerbatimOccurrencesPersistedError() - Method in class org.gbif.api.model.crawler.DatasetProcessStatus
 
getVerbatimOccurrencesPersistedSuccessful() - Method in class org.gbif.api.model.crawler.DatasetProcessStatus
 
getVerbatimScientificName() - Method in class org.gbif.api.model.occurrence.Occurrence
The verbatim scientific name as provided by the source.
getVernacularName() - Method in class org.gbif.api.model.checklistbank.NameUsage
A common or vernacular name for this usage.
getVernacularName() - Method in class org.gbif.api.model.checklistbank.VernacularName
A common or vernacular name.
getVernacularNames() - Method in class org.gbif.api.model.checklistbank.NameUsageContainer
 
getVernacularNames() - Method in class org.gbif.api.model.checklistbank.search.NameUsageSearchResult
 
getVersion() - Method in class org.gbif.api.model.registry.Dataset
 
getVocabularyBackedTerms() - Static method in class org.gbif.dwc.terms.Terms
Returns all the Term that are annotated with Vocabulary.
getWaterBody() - Method in class org.gbif.api.model.occurrence.Occurrence
 
getWorkflow(boolean, boolean) - Static method in class org.gbif.api.model.pipelines.PipelinesWorkflow
 
getYear() - Method in class org.gbif.api.model.checklistbank.ParsedName
The year of publication as given in the authorship.
getYear() - Method in class org.gbif.api.model.occurrence.DownloadStatistics
 
getYear() - Method in class org.gbif.api.model.occurrence.Occurrence
The full year of the event date.
getYearCounts(int, int) - Method in interface org.gbif.api.service.occurrence.OccurrenceDistributionIndexService
Returns the occurrence records count by year.
getYearInt() - Method in class org.gbif.api.model.checklistbank.ParsedName
 
getYearMonth() - Method in class org.gbif.api.model.occurrence.DownloadStatistics
Ignore in serialization, only year and month is relevant.
Graph() - Constructor for class org.gbif.api.model.pipelines.PipelinesWorkflow.Graph
 
GreaterThanOrEqualsPredicate<S extends SearchParameter> - Class in org.gbif.api.model.predicate
This predicate checks if its key is greater than or equal its value.
GreaterThanOrEqualsPredicate(S, String) - Constructor for class org.gbif.api.model.predicate.GreaterThanOrEqualsPredicate
 
GreaterThanPredicate<S extends SearchParameter> - Class in org.gbif.api.model.predicate
This predicate checks if its key is greater than its value.
GreaterThanPredicate(S, String) - Constructor for class org.gbif.api.model.predicate.GreaterThanPredicate
 
Grid - Class in org.gbif.api.model.registry
 
Grid() - Constructor for class org.gbif.api.model.registry.Grid
 
GROUP_CRAWLING - Static variable in enum org.gbif.dwc.terms.GbifTerm
 
GROUP_DATASET - Static variable in enum org.gbif.dwc.terms.GbifTerm
 
GROUP_EVENT - Static variable in enum org.gbif.dwc.terms.DwcTerm
 
GROUP_GEOLOGICALCONTEXT - Static variable in enum org.gbif.dwc.terms.DwcTerm
 
GROUP_IDENTIFICATION - Static variable in enum org.gbif.dwc.terms.DwcTerm
 
GROUP_LOCATION - Static variable in enum org.gbif.dwc.terms.DwcTerm
 
GROUP_MATERIAL_ENTITY - Static variable in enum org.gbif.dwc.terms.DwcTerm
 
GROUP_MATERIAL_SAMPLE - Static variable in enum org.gbif.dwc.terms.DwcTerm
 
GROUP_MEASUREMENTORFACT - Static variable in enum org.gbif.dwc.terms.DwcTerm
 
GROUP_OCCURRENCE - Static variable in enum org.gbif.dwc.terms.DwcTerm
 
GROUP_ORGANISM - Static variable in enum org.gbif.dwc.terms.DwcTerm
 
GROUP_RECORD - Static variable in enum org.gbif.dwc.terms.DwcTerm
 
GROUP_RESOURCERELATIONSHIP - Static variable in enum org.gbif.dwc.terms.DwcTerm
 
GROUP_ROW_TYPE - Static variable in enum org.gbif.dwc.terms.GbifTerm
 
GROUP_SPECIES_DISTRIBUTION_EXTENSION - Static variable in enum org.gbif.dwc.terms.GbifTerm
 
GROUP_SPECIES_PROFILE_EXTENSION - Static variable in enum org.gbif.dwc.terms.GbifTerm
 
GROUP_TAXON - Static variable in enum org.gbif.dwc.terms.DwcTerm
 
GROUP_VERNACULAR_NAME_EXTENSION - Static variable in enum org.gbif.dwc.terms.GbifTerm
 
GROUPS - Static variable in enum org.gbif.dwc.terms.DwcTerm
Lists all term groups in the order given on the Darwin Core Quick Reference Guide.
GROUPS - Static variable in enum org.gbif.dwc.terms.GbifTerm
Lists all GBIF term groups.

H

Habitat - Enum in org.gbif.api.vocabulary
Very coarse habitat vocabulary matching the boolean biome flags found in the species profile extension.
handleBatch(byte[], byte[], ExportFormat) - Method in interface org.gbif.api.service.collections.BatchService
Handles a batch.
hasAuthorship() - Method in class org.gbif.api.model.checklistbank.ParsedName
 
hasContent(LinneanClassification) - Static method in class org.gbif.api.util.ClassificationUtils
 
hasCoreField(Term) - Method in class org.gbif.api.model.checklistbank.VerbatimNameUsage
 
hasExtension(Extension) - Method in class org.gbif.api.model.checklistbank.VerbatimNameUsage
 
hasExtension(Term) - Method in class org.gbif.api.model.checklistbank.VerbatimNameUsage
 
hashCode() - Method in class org.gbif.api.model.checklistbank.DatasetMetrics
 
hashCode() - Method in class org.gbif.api.model.checklistbank.Description
 
hashCode() - Method in class org.gbif.api.model.checklistbank.Distribution
 
hashCode() - Method in class org.gbif.api.model.checklistbank.NameUsage
 
hashCode() - Method in class org.gbif.api.model.checklistbank.NameUsageContainer
 
hashCode() - Method in class org.gbif.api.model.checklistbank.NameUsageMatch
 
hashCode() - Method in class org.gbif.api.model.checklistbank.NameUsageMetrics
 
hashCode() - Method in class org.gbif.api.model.checklistbank.ParsedName
 
hashCode() - Method in class org.gbif.api.model.checklistbank.Reference
 
hashCode() - Method in class org.gbif.api.model.checklistbank.search.NameUsageSearchResult
 
hashCode() - Method in class org.gbif.api.model.checklistbank.search.NameUsageSuggestResult
 
hashCode() - Method in class org.gbif.api.model.checklistbank.SpeciesProfile
 
hashCode() - Method in class org.gbif.api.model.checklistbank.TableOfContents
 
hashCode() - Method in class org.gbif.api.model.checklistbank.TypeSpecimen
 
hashCode() - Method in class org.gbif.api.model.checklistbank.VerbatimNameUsage
 
hashCode() - Method in class org.gbif.api.model.checklistbank.VernacularName
 
hashCode() - Method in class org.gbif.api.model.collections.Address
 
hashCode() - Method in class org.gbif.api.model.collections.AlternativeCode
 
hashCode() - Method in class org.gbif.api.model.collections.CollectionImportParams
 
hashCode() - Method in class org.gbif.api.model.collections.Contact
 
hashCode() - Method in class org.gbif.api.model.collections.duplicates.Duplicate
 
hashCode() - Method in class org.gbif.api.model.collections.InstitutionImportParams
 
hashCode() - Method in class org.gbif.api.model.collections.lookup.BaseEntityMatched
 
hashCode() - Method in class org.gbif.api.model.collections.lookup.CollectionMatched
 
hashCode() - Method in class org.gbif.api.model.collections.lookup.LookupParams
 
hashCode() - Method in class org.gbif.api.model.collections.lookup.Match
 
hashCode() - Method in class org.gbif.api.model.collections.MasterSourceMetadata
 
hashCode() - Method in class org.gbif.api.model.collections.OccurrenceMapping
 
hashCode() - Method in class org.gbif.api.model.collections.search.CollectionsSearchResponse
 
hashCode() - Method in class org.gbif.api.model.collections.search.CollectionsSearchResponse.Match
 
hashCode() - Method in class org.gbif.api.model.collections.SourceableField
 
hashCode() - Method in class org.gbif.api.model.collections.SourceableField.Source
 
hashCode() - Method in class org.gbif.api.model.collections.suggestions.BaseChangeSuggestion
 
hashCode() - Method in class org.gbif.api.model.collections.suggestions.Change
 
hashCode() - Method in class org.gbif.api.model.collections.suggestions.InstitutionChangeSuggestion
 
hashCode() - Method in class org.gbif.api.model.collections.UserId
 
hashCode() - Method in class org.gbif.api.model.common.AbstractGbifUser
 
hashCode() - Method in class org.gbif.api.model.common.DOI
 
hashCode() - Method in class org.gbif.api.model.common.DoiData
 
hashCode() - Method in class org.gbif.api.model.common.GbifUser
 
hashCode() - Method in class org.gbif.api.model.common.Identifier
 
hashCode() - Method in class org.gbif.api.model.common.InterpretedField
Deprecated.
 
hashCode() - Method in class org.gbif.api.model.common.MediaObject
 
hashCode() - Method in class org.gbif.api.model.common.paging.PageableBase
 
hashCode() - Method in class org.gbif.api.model.common.paging.PagingResponse
 
hashCode() - Method in class org.gbif.api.model.common.search.Facet.Count
 
hashCode() - Method in class org.gbif.api.model.common.search.Facet
 
hashCode() - Method in class org.gbif.api.model.common.search.SearchResponse
 
hashCode() - Method in class org.gbif.api.model.common.search.SpellCheckResponse
 
hashCode() - Method in class org.gbif.api.model.common.search.SpellCheckResponse.Suggestion
 
hashCode() - Method in class org.gbif.api.model.common.User
Deprecated.
 
hashCode() - Method in class org.gbif.api.model.crawler.CrawlJob
 
hashCode() - Method in class org.gbif.api.model.crawler.DatasetProcessStatus
 
hashCode() - Method in class org.gbif.api.model.crawler.DwcaValidationReport
 
hashCode() - Method in class org.gbif.api.model.crawler.GenericValidationReport
 
hashCode() - Method in class org.gbif.api.model.crawler.OccurrenceValidationReport
 
hashCode() - Method in class org.gbif.api.model.metrics.cube.Dimension
 
hashCode() - Method in class org.gbif.api.model.metrics.RecordError
Deprecated.
 
hashCode() - Method in class org.gbif.api.model.occurrence.AgentIdentifier
 
hashCode() - Method in class org.gbif.api.model.occurrence.DownloadRequest
 
hashCode() - Method in class org.gbif.api.model.occurrence.DownloadStatistics
 
hashCode() - Method in class org.gbif.api.model.occurrence.Gadm
 
hashCode() - Method in class org.gbif.api.model.occurrence.GadmFeature
 
hashCode() - Method in class org.gbif.api.model.occurrence.geo.DistanceUnit.Distance
 
hashCode() - Method in class org.gbif.api.model.occurrence.geo.DistanceUnit.GeoDistance
 
hashCode() - Method in class org.gbif.api.model.occurrence.MeasurementOrFact
 
hashCode() - Method in class org.gbif.api.model.occurrence.OccurrenceRelation
 
hashCode() - Method in class org.gbif.api.model.occurrence.PredicateDownloadRequest
 
hashCode() - Method in class org.gbif.api.model.occurrence.SqlDownloadRequest
 
hashCode() - Method in class org.gbif.api.model.occurrence.VerbatimOccurrence
 
hashCode() - Method in class org.gbif.api.model.pipelines.IngestionProcess
 
hashCode() - Method in class org.gbif.api.model.pipelines.PipelineExecution
 
hashCode() - Method in class org.gbif.api.model.pipelines.PipelineProcess
 
hashCode() - Method in class org.gbif.api.model.pipelines.PipelineStep
 
hashCode() - Method in class org.gbif.api.model.pipelines.PipelineStep.MetricInfo
 
hashCode() - Method in class org.gbif.api.model.pipelines.RunPipelineResponse
 
hashCode() - Method in class org.gbif.api.model.pipelines.WorkflowStep
 
hashCode() - Method in class org.gbif.api.model.pipelines.ws.SearchResult
 
hashCode() - Method in class org.gbif.api.model.predicate.CompoundPredicate
 
hashCode() - Method in class org.gbif.api.model.predicate.FullTextSearchPredicate
 
hashCode() - Method in class org.gbif.api.model.predicate.GeoDistancePredicate
 
hashCode() - Method in class org.gbif.api.model.predicate.GreaterThanOrEqualsPredicate
 
hashCode() - Method in class org.gbif.api.model.predicate.GreaterThanPredicate
 
hashCode() - Method in class org.gbif.api.model.predicate.InPredicate
 
hashCode() - Method in class org.gbif.api.model.predicate.IsNotNullPredicate
 
hashCode() - Method in class org.gbif.api.model.predicate.IsNullPredicate
 
hashCode() - Method in class org.gbif.api.model.predicate.LessThanOrEqualsPredicate
 
hashCode() - Method in class org.gbif.api.model.predicate.LessThanPredicate
 
hashCode() - Method in class org.gbif.api.model.predicate.NotPredicate
 
hashCode() - Method in class org.gbif.api.model.predicate.SimplePredicate
 
hashCode() - Method in class org.gbif.api.model.predicate.WithinPredicate
 
hashCode() - Method in class org.gbif.api.model.registry.Citation
 
hashCode() - Method in class org.gbif.api.model.registry.CitationContact
 
hashCode() - Method in class org.gbif.api.model.registry.Comment
 
hashCode() - Method in class org.gbif.api.model.registry.Contact
 
hashCode() - Method in class org.gbif.api.model.registry.Dataset
 
hashCode() - Method in class org.gbif.api.model.registry.eml.Collection
 
hashCode() - Method in class org.gbif.api.model.registry.eml.curatorial.CuratorialUnit
 
hashCode() - Method in class org.gbif.api.model.registry.eml.curatorial.CuratorialUnitComposite
 
hashCode() - Method in class org.gbif.api.model.registry.eml.curatorial.CuratorialUnitCount
 
hashCode() - Method in class org.gbif.api.model.registry.eml.curatorial.CuratorialUnitRange
 
hashCode() - Method in class org.gbif.api.model.registry.eml.DataDescription
 
hashCode() - Method in class org.gbif.api.model.registry.eml.geospatial.GeospatialCoverage
 
hashCode() - Method in class org.gbif.api.model.registry.eml.KeywordCollection
 
hashCode() - Method in class org.gbif.api.model.registry.eml.Project
 
hashCode() - Method in class org.gbif.api.model.registry.eml.SamplingDescription
 
hashCode() - Method in class org.gbif.api.model.registry.eml.TaxonomicCoverage
 
hashCode() - Method in class org.gbif.api.model.registry.eml.TaxonomicCoverages
 
hashCode() - Method in class org.gbif.api.model.registry.eml.temporal.DateRange
 
hashCode() - Method in class org.gbif.api.model.registry.eml.temporal.SingleDate
 
hashCode() - Method in class org.gbif.api.model.registry.eml.temporal.VerbatimTimePeriod
 
hashCode() - Method in class org.gbif.api.model.registry.Endpoint
 
hashCode() - Method in class org.gbif.api.model.registry.Grid
 
hashCode() - Method in class org.gbif.api.model.registry.Identifier
 
hashCode() - Method in class org.gbif.api.model.registry.Installation
 
hashCode() - Method in class org.gbif.api.model.registry.MachineTag
 
hashCode() - Method in class org.gbif.api.model.registry.Metadata
 
hashCode() - Method in class org.gbif.api.model.registry.metasync.MetasyncHistory
 
hashCode() - Method in class org.gbif.api.model.registry.Network
 
hashCode() - Method in class org.gbif.api.model.registry.Node
 
hashCode() - Method in class org.gbif.api.model.registry.Organization
 
hashCode() - Method in class org.gbif.api.model.registry.search.collections.KeyCodeNameResult
 
hashCode() - Method in class org.gbif.api.model.registry.search.DatasetSearchResult
 
hashCode() - Method in class org.gbif.api.model.registry.search.DatasetSuggestResult
 
hashCode() - Method in class org.gbif.api.model.registry.search.KeyTitleResult
 
hashCode() - Method in class org.gbif.api.model.registry.Tag
 
hashCode() - Method in class org.gbif.api.v2.NameUsageMatch2.Diagnostics
 
hashCode() - Method in class org.gbif.api.v2.NameUsageMatch2
 
hashCode() - Method in class org.gbif.api.v2.NameUsageMatch2.Nomenclature
 
hashCode() - Method in class org.gbif.api.v2.RankedName
 
hashCode() - Method in class org.gbif.dwc.terms.BibTexTerm
 
hashCode() - Method in class org.gbif.dwc.terms.UnknownTerm
 
hasLowerBound() - Method in class org.gbif.api.util.Range
Returns true if this range has a lower endpoint.
hasRole(UserRole) - Method in class org.gbif.api.model.common.AbstractGbifUser
Checks if the user has the given user role.
hasRole(String) - Method in class org.gbif.api.model.common.AppPrincipal
 
hasRole(String) - Method in interface org.gbif.api.model.common.ExtendedPrincipal
 
hasRole(String) - Method in class org.gbif.api.model.common.GbifUserPrincipal
Checks if the user has the given string based role.
hasRole(UserRole) - Method in class org.gbif.api.model.common.User
Deprecated.
Checks if the user has the given user role.
hasRole(String) - Method in class org.gbif.api.model.common.UserPrincipal
Deprecated.
Checks if the user has the given string based role.
hasSpatialIssue() - Method in class org.gbif.api.model.event.Event
Convenience method checking if any spatial validation rule has not passed.
hasSpatialIssue() - Method in class org.gbif.api.model.occurrence.Occurrence
Convenience method checking if any spatial validation rule has not passed.
hasUpperBound() - Method in class org.gbif.api.util.Range
Returns true if this range has an upper endpoint.
hasVerbatimField(Term) - Method in class org.gbif.api.model.occurrence.VerbatimOccurrence
 
HIGHER_RANKS - Static variable in enum org.gbif.dwc.terms.DwcTerm
List of all higher rank terms in dwc, ordered by rank and starting with kingdom.
higherThan(Rank) - Method in enum org.gbif.api.vocabulary.Rank
 
history(List<FinishReason>, Pageable) - Method in interface org.gbif.api.service.pipelines.IngestionHistoryService
 
history(UUID, List<FinishReason>, Pageable) - Method in interface org.gbif.api.service.pipelines.IngestionHistoryService
 
history(Pageable) - Method in interface org.gbif.api.service.pipelines.PipelinesHistoryService
Lists the history of all PipelineProcess, sorted descending from the most recent one.
history(UUID, Pageable) - Method in interface org.gbif.api.service.pipelines.PipelinesHistoryService
Lists the history of all PipelineProcess of a dataset, sorted descending from the most recent one.
hostedDatasets(UUID, Pageable) - Method in interface org.gbif.api.service.registry.OrganizationService
Provides paging service to list datasets hosted by, but not owned by, a specific organization.
hostedDatasets(UUID, DatasetType, OrganizationService) - Static method in class org.gbif.api.util.iterables.Iterables
 
hostedDatasets(UUID, DatasetType, InstallationService) - Static method in class org.gbif.api.util.iterables.Iterables
 
HttpURI - Annotation Type in org.gbif.api.util
Validates that the URI field is absolute, beginning with either http or https.
HuhValidator - Class in org.gbif.api.util.validators.identifierschemes
 
HuhValidator() - Constructor for class org.gbif.api.util.validators.identifierschemes.HuhValidator
 
HYBRID_MARKER - Static variable in class org.gbif.api.model.checklistbank.ParsedName
 

I

Identifiable - Interface in org.gbif.api.model.registry
Generic identifier interface for entities.
identifier(String) - Method in class org.gbif.api.model.collections.request.CollectionSearchRequest.Builder
 
identifier(String) - Method in class org.gbif.api.model.collections.request.InstitutionSearchRequest.Builder
 
Identifier - Class in org.gbif.api.model.common
Identifier Model Object represents an alternative identifier for an occurrence or name usage.
Identifier() - Constructor for class org.gbif.api.model.common.Identifier
 
Identifier - Class in org.gbif.api.model.registry
 
Identifier() - Constructor for class org.gbif.api.model.registry.Identifier
 
Identifier(IdentifierType, String) - Constructor for class org.gbif.api.model.registry.Identifier
 
IDENTIFIER_PARAM - Static variable in class org.gbif.api.model.registry.search.RequestSearchParams
 
IDENTIFIER_TYPE_PARAM - Static variable in class org.gbif.api.model.registry.search.RequestSearchParams
 
IdentifierScheme - Enum in org.gbif.api.util.validators.identifierschemes
 
IdentifierSchemeValidator - Interface in org.gbif.api.util.validators.identifierschemes
Validation and normalization interface for identifier schemes.
IdentifierService - Interface in org.gbif.api.service.checklistbank
Service interface for Identifier methods.
IdentifierService - Interface in org.gbif.api.service.registry
Service provides a set of operations on Identifier.
identifierType(IdentifierType) - Method in class org.gbif.api.model.collections.request.CollectionSearchRequest.Builder
 
identifierType(IdentifierType) - Method in class org.gbif.api.model.collections.request.InstitutionSearchRequest.Builder
 
IdentifierType - Enum in org.gbif.api.vocabulary
Enumeration for all possible identifier types.
IdentifierUtils - Class in org.gbif.api.util
This class contains utility methods for identifiers.
IdentifierUtils() - Constructor for class org.gbif.api.util.IdentifierUtils
 
IdentityAccessService - Interface in org.gbif.api.service.common
Identity service accessing a single user, in read-only.
IdType - Enum in org.gbif.api.vocabulary.collections
ID type for user IDs in GRSciColl contacts.
IhIrnValidator - Class in org.gbif.api.util.validators.identifierschemes
 
IhIrnValidator() - Constructor for class org.gbif.api.util.validators.identifierschemes.IhIrnValidator
 
implies(Subject) - Method in class org.gbif.api.model.common.AppPrincipal
 
INATURALIST_DATASET_KEY - Static variable in class org.gbif.api.model.Constants
The dataset key for the iNaturalist Research-grade Observations dataset.
inferFrom(String) - Static method in enum org.gbif.api.vocabulary.IdentifierType
Tries to infer the identifier type from a given identifier.
inferType(String) - Static method in enum org.gbif.api.vocabulary.ContactType
Tries its best to infer a ContactType from a given string.
IngestionHistoryService - Interface in org.gbif.api.service.pipelines
 
IngestionProcess - Class in org.gbif.api.model.pipelines
 
IngestionProcess() - Constructor for class org.gbif.api.model.pipelines.IngestionProcess
 
initialize(HttpURI) - Method in class org.gbif.api.util.URIValidator
Initializes the validator in preparation for URIValidator.isValid(URI, javax.validation.ConstraintValidatorContext) calls.
initialize(ValidEmail) - Method in class org.gbif.api.util.validators.email.EmailConstraintValidator
 
InPredicate<S extends SearchParameter> - Class in org.gbif.api.model.predicate
This predicate checks if its key contains any of its values.
InPredicate(S, Collection<String>, Boolean) - Constructor for class org.gbif.api.model.predicate.InPredicate
 
insertMetadata(UUID, InputStream) - Method in interface org.gbif.api.service.registry.DatasetService
Inserts a metadata document, replacing any previously existing document of the same type.
Installation - Class in org.gbif.api.model.registry
A technical installation which can serve datasets.
Installation() - Constructor for class org.gbif.api.model.registry.Installation
 
INSTALLATION_TYPE_PARAM - Static variable in class org.gbif.api.model.registry.search.InstallationRequestSearchParams
 
InstallationPager - Class in org.gbif.api.util.iterables
Iterates over all datasets hosted by a given installation.
InstallationPager(InstallationService, UUID, DatasetType, int) - Constructor for class org.gbif.api.util.iterables.InstallationPager
 
InstallationRequestSearchParams - Class in org.gbif.api.model.registry.search
 
InstallationRequestSearchParams() - Constructor for class org.gbif.api.model.registry.search.InstallationRequestSearchParams
 
installations(UUID, Pageable) - Method in interface org.gbif.api.service.registry.NodeService
Provides the installations that are registered to organizations with an approved endorsement from the node.
installations(UUID, Pageable) - Method in interface org.gbif.api.service.registry.OrganizationService
Provides paging service to list installations for the organization.
InstallationService - Interface in org.gbif.api.service.registry
 
InstallationType - Enum in org.gbif.api.vocabulary
Enumeration for all possible installation types.
INSTANCE - Static variable in class org.gbif.api.util.comparators.EndpointCreatedComparator
 
instance() - Static method in class org.gbif.dwc.terms.TermFactory
 
Institution - Class in org.gbif.api.model.collections
The owner or location of collection.
Institution() - Constructor for class org.gbif.api.model.collections.Institution
 
institution(UUID) - Method in class org.gbif.api.model.collections.request.CollectionSearchRequest.Builder
 
institutionalGovernance(InstitutionGovernance) - Method in class org.gbif.api.model.collections.request.InstitutionSearchRequest.Builder
 
InstitutionChangeSuggestion - Class in org.gbif.api.model.collections.suggestions
 
InstitutionChangeSuggestion() - Constructor for class org.gbif.api.model.collections.suggestions.InstitutionChangeSuggestion
 
institutionCode(String) - Method in class org.gbif.api.model.metrics.RecordError.Builder
Deprecated.
 
InstitutionGovernance - Enum in org.gbif.api.vocabulary.collections
Mechanisms, processes and relations by which an institution is controlled and directed.
InstitutionImportParams - Class in org.gbif.api.model.collections
Contains the parameters to create an institution from an organization.
InstitutionImportParams() - Constructor for class org.gbif.api.model.collections.InstitutionImportParams
 
institutionKeys(List<UUID>) - Method in class org.gbif.api.model.collections.request.CollectionSearchRequest.Builder
 
institutionKeys(List<UUID>) - Method in class org.gbif.api.model.collections.request.InstitutionSearchRequest.Builder
 
InstitutionMatched - Class in org.gbif.api.model.collections.lookup
 
InstitutionMatched() - Constructor for class org.gbif.api.model.collections.lookup.InstitutionMatched
 
institutions(InstitutionSearchRequest, InstitutionService, Integer) - Static method in class org.gbif.api.util.iterables.Iterables
InstitutionSearchRequest - Class in org.gbif.api.model.collections.request
 
InstitutionSearchRequest() - Constructor for class org.gbif.api.model.collections.request.InstitutionSearchRequest
 
InstitutionSearchRequest.Builder - Class in org.gbif.api.model.collections.request
 
InstitutionService - Interface in org.gbif.api.service.collections
Service for institutions in the collections context.
InstitutionsPager - Class in org.gbif.api.util.iterables
InstitutionsPager(InstitutionService, InstitutionSearchRequest, int) - Constructor for class org.gbif.api.util.iterables.InstitutionsPager
 
InstitutionType - Enum in org.gbif.api.vocabulary.collections
Categorization of institutions (collection holders) types.
InternalOccurrenceSearchParameter - Enum in org.gbif.api.model.occurrence.search
Query parameters used internally (not part of the public API) to support complex data types.
InterpretationRemark - Interface in org.gbif.api.vocabulary
Represents a remark flagged during the interpretation phase.
InterpretationRemarkSeverity - Enum in org.gbif.api.vocabulary
Severity of an InterpretationRemark.
InterpretationType - Interface in org.gbif.api.model.pipelines
Enum to represent the pipelines internal interpretation type steps.
InterpretationType.RecordType - Enum in org.gbif.api.model.pipelines
 
InterpretedEnum<V,I extends Enum<I>> - Class in org.gbif.api.model.common
Deprecated.
InterpretedEnum() - Constructor for class org.gbif.api.model.common.InterpretedEnum
Deprecated.
 
InterpretedEnum(V, I) - Constructor for class org.gbif.api.model.common.InterpretedEnum
Deprecated.
 
InterpretedField<V,I> - Class in org.gbif.api.model.common
Deprecated.
InterpretedField() - Constructor for class org.gbif.api.model.common.InterpretedField
Deprecated.
 
InterpretedField(V, I) - Constructor for class org.gbif.api.model.common.InterpretedField
Deprecated.
 
interpretedOccurrencesPersistedError(long) - Method in class org.gbif.api.model.crawler.DatasetProcessStatus.Builder
 
interpretedOccurrencesPersistedSuccessful(long) - Method in class org.gbif.api.model.crawler.DatasetProcessStatus.Builder
 
IS_ENDORSED_PARAM - Static variable in class org.gbif.api.model.registry.search.OrganizationRequestSearchParams
 
IS_GEOREFERENCED - Static variable in class org.gbif.api.model.metrics.cube.OccurrenceCube
 
isAccepted() - Method in enum org.gbif.api.vocabulary.TaxonomicStatus
 
isActive() - Method in class org.gbif.api.model.collections.Collection
Is this collection currently active/maintained.
isActive() - Method in interface org.gbif.api.model.collections.CollectionEntity
Is this entity currently active/maintained.
isActive() - Method in class org.gbif.api.model.collections.duplicates.Duplicate
 
isActive() - Method in class org.gbif.api.model.collections.Institution
Is the institution active/operational?.
isActive() - Method in class org.gbif.api.model.collections.lookup.BaseEntityMatched
 
isActive() - Method in interface org.gbif.api.model.collections.lookup.EntityMatched
 
isAdmin() - Method in class org.gbif.api.model.common.User
Deprecated.
 
isAllRecordsChecked() - Method in class org.gbif.api.model.crawler.GenericValidationReport
 
isAllRecordsChecked() - Method in class org.gbif.api.model.crawler.OccurrenceValidationReport
 
isAutonym() - Method in class org.gbif.api.model.checklistbank.ParsedName
 
isAvailable() - Method in class org.gbif.api.model.occurrence.Download
 
isBackboneType() - Method in enum org.gbif.api.vocabulary.NameType
 
isBad() - Method in enum org.gbif.api.vocabulary.NomenclaturalStatus
Opposite of good and not doubtful.
isBinomial() - Method in class org.gbif.api.model.checklistbank.ParsedName
 
isCitationProvidedBySource() - Method in class org.gbif.api.model.registry.Citation
 
isClass() - Method in enum org.gbif.dwc.terms.AcefTerm
 
isClass() - Method in enum org.gbif.dwc.terms.AcTerm
 
isClass() - Method in class org.gbif.dwc.terms.BibTexTerm
 
isClass() - Method in enum org.gbif.dwc.terms.DcElement
 
isClass() - Method in enum org.gbif.dwc.terms.DcTerm
 
isClass() - Method in enum org.gbif.dwc.terms.DwcaTerm
 
isClass() - Method in enum org.gbif.dwc.terms.DwcTerm
 
isClass() - Method in enum org.gbif.dwc.terms.GadmTerm
 
isClass() - Method in enum org.gbif.dwc.terms.GbifInternalTerm
 
isClass() - Method in enum org.gbif.dwc.terms.GbifTerm
 
isClass() - Method in enum org.gbif.dwc.terms.IucnTerm
 
isClass() - Method in enum org.gbif.dwc.terms.PlaziTerm
 
isClass() - Method in interface org.gbif.dwc.terms.Term
Informs if a term is generally used as a class term, i.e.
isClass() - Method in class org.gbif.dwc.terms.UnknownTerm
 
isClass() - Method in enum org.gbif.dwc.terms.XmpRightsTerm
 
isClass() - Method in enum org.gbif.dwc.terms.XmpTerm
 
isConcrete() - Method in enum org.gbif.api.vocabulary.License
Indicates if a license is a concrete license (true) or an abstracted license (false) like UNSPECIFIED or UNSUPPORTED.
isCorrectlySpelled() - Method in class org.gbif.api.model.common.search.SpellCheckResponse
 
isCustomCode(String) - Static method in enum org.gbif.api.vocabulary.Country
 
isDateRange(String) - Static method in class org.gbif.api.util.SearchTypeValidator
Determines whether the value given is a valid date range or low precision (year, year-month) date, delimiting two values by a comma.
isDeprecated() - Method in interface org.gbif.api.vocabulary.InterpretationRemark
Checks if the InterpretationRemark is deprecated or not.
isDeprecated() - Method in enum org.gbif.api.vocabulary.NameUsageIssue
 
isDeprecated() - Method in enum org.gbif.api.vocabulary.OccurrenceIssue
 
isDeprecated() - Method in enum org.gbif.dwc.terms.GbifTerm
 
isDisabled() - Method in class org.gbif.api.model.registry.Installation
 
isDisplayOnNHCPortal() - Method in class org.gbif.api.model.collections.search.CollectionsSearchResponse
 
isDoubtful() - Method in enum org.gbif.api.vocabulary.NomenclaturalStatus
 
isEmpty() - Method in class org.gbif.api.model.checklistbank.TableOfContents
 
isEmpty() - Method in class org.gbif.api.model.collections.duplicates.DuplicatesRequest
 
isEndOfRecords() - Method in class org.gbif.api.model.common.paging.PagingResponse
Flag indicating whether more records do exist.
isEndorsementApproved() - Method in class org.gbif.api.model.registry.Organization
 
isExtended() - Method in class org.gbif.api.model.checklistbank.search.NameUsageSearchRequest
Allows to request an extended search object with the larger list properties: habitats nomenclaturalStatus threatStatuses descriptions vernacularNames If extended=false and highlighting is activated, the highlighted matches will still be added to the extended properties.
isExternal() - Method in class org.gbif.api.model.registry.Dataset
 
isExternalKey() - Method in class org.gbif.api.util.DatasetKey
 
isExtinct() - Method in class org.gbif.api.model.checklistbank.NameUsageContainer
Convenience method that analyzes all species profile records for extinct.
isExtinct() - Method in class org.gbif.api.model.checklistbank.search.NameUsageSearchResult
 
isExtinct() - Method in class org.gbif.api.model.checklistbank.SpeciesProfile
Flag indicating an extinct organism.
isFieldDeprecated(Class<?>, String) - Static method in class org.gbif.api.util.AnnotationUtils
Check if a field is annotated with @Deprecated in the provided class.
isFinished() - Method in class org.gbif.api.model.pipelines.PipelineExecution
 
isFreshwater() - Method in class org.gbif.api.model.checklistbank.NameUsageContainer
Convenience method that analyzes all species profile records for freshwater habitat flags.
isFreshwater() - Method in class org.gbif.api.model.checklistbank.SpeciesProfile
A Boolean flag indicating whether the taxon is a freshwater organism.
isGlobalCoverage() - Method in class org.gbif.api.model.registry.eml.geospatial.BoundingBox
 
isGood() - Method in enum org.gbif.api.vocabulary.NomenclaturalStatus
A vague grouping of nomenclatural status terms including all that can be used to name a correct/valid taxon.
isHighlight() - Method in class org.gbif.api.model.common.search.SearchRequest
 
isHybrid() - Method in class org.gbif.api.model.checklistbank.SpeciesProfile
Flag indicating a hybrid organism.
isHybridFormula() - Method in class org.gbif.api.model.checklistbank.ParsedName
 
isIdigbio() - Method in class org.gbif.api.model.collections.duplicates.Duplicate
 
isIh() - Method in class org.gbif.api.model.collections.duplicates.Duplicate
 
isIndetermined() - Method in class org.gbif.api.model.checklistbank.ParsedName
 
isIndexHerbariorumRecord() - Method in class org.gbif.api.model.collections.Collection
 
isIndexHerbariorumRecord() - Method in class org.gbif.api.model.collections.Institution
Was the institution record imported form Index Herbariorum.
isInfrageneric() - Method in enum org.gbif.api.vocabulary.Rank
 
isInfragenericStrictly() - Method in enum org.gbif.api.vocabulary.Rank
 
isInfraspecific() - Method in enum org.gbif.api.vocabulary.Rank
 
isInfrasubspecific() - Method in enum org.gbif.api.vocabulary.Rank
 
isLegacy() - Method in enum org.gbif.api.vocabulary.Rank
 
isLinnean() - Method in enum org.gbif.api.vocabulary.Rank
True for all mayor Linnéan ranks, ie kingdom,phylum,class,order,family,genus and species.
isLockedForAutoUpdate() - Method in class org.gbif.api.model.registry.Dataset
 
isMarine() - Method in class org.gbif.api.model.checklistbank.NameUsageContainer
Convenience method that analyzes all species profile records for marine habitat flags.
isMarine() - Method in class org.gbif.api.model.checklistbank.SpeciesProfile
A Boolean flag indicating whether the taxon is a marine organism, i.e.
isMatchCase() - Method in class org.gbif.api.model.occurrence.search.OccurrenceSearchRequest
This flag enables the use of case-sensitive matches and aggregations on certain search parameters.
isMatchCase() - Method in class org.gbif.api.model.predicate.InPredicate
This flag enables the use of case-sensitive matches and aggregations on certain search parameters.
isMatchCase() - Method in class org.gbif.api.model.predicate.SimplePredicate
This flag enables the use of case-sensitive matches and aggregations on certain search parameters.
isMultiSelectFacets() - Method in class org.gbif.api.model.common.search.FacetedSearchRequest
 
IsniValidator - Class in org.gbif.api.util.validators.identifierschemes
Validator for ISNI numbers.
IsniValidator() - Constructor for class org.gbif.api.util.validators.identifierschemes.IsniValidator
 
IsNotNullPredicate<S extends SearchParameter> - Class in org.gbif.api.model.predicate
 
IsNotNullPredicate(S) - Constructor for class org.gbif.api.model.predicate.IsNotNullPredicate
 
isNub() - Method in class org.gbif.api.model.checklistbank.NameUsage
 
IsNullPredicate<S extends SearchParameter> - Class in org.gbif.api.model.predicate
 
IsNullPredicate(S) - Constructor for class org.gbif.api.model.predicate.IsNullPredicate
 
isNumericRange(String) - Static method in class org.gbif.api.util.SearchTypeValidator
Determines whether the value given is a valid numeric range, delimiting two values by a comma.
ISO_DATE_FORMATTER - Static variable in class org.gbif.api.util.IsoDateParsingUtils
 
IsoDateInterval - Class in org.gbif.api.util
Represents an ISO 8601:2019 date, date-time or date/date-time interval.
IsoDateInterval() - Constructor for class org.gbif.api.util.IsoDateInterval
Create an empty DateRange.
IsoDateInterval(Temporal) - Constructor for class org.gbif.api.util.IsoDateInterval
Create a range with bounds of date.
IsoDateInterval(Temporal, Temporal) - Constructor for class org.gbif.api.util.IsoDateInterval
Create a range with bounds from and to.
IsoDateIntervalDeserializer() - Constructor for class org.gbif.api.jackson.IsoDateIntervalSerde.IsoDateIntervalDeserializer
 
IsoDateIntervalSerde - Class in org.gbif.api.jackson
Jackson JsonSerializer classes for IsoDateIntervals with specified formats.
IsoDateIntervalSerde() - Constructor for class org.gbif.api.jackson.IsoDateIntervalSerde
 
IsoDateIntervalSerde.IsoDateIntervalDeserializer - Class in org.gbif.api.jackson
Jackson JsonDeserializer for IsoDateIntervals formatted above, falling back to the Jackson way.
IsoDateIntervalSerde.IsoDateIntervalSerializer - Class in org.gbif.api.jackson
Jackson JsonSerializer for IsoDateInterval.
IsoDateIntervalSerializer() - Constructor for class org.gbif.api.jackson.IsoDateIntervalSerde.IsoDateIntervalSerializer
 
IsoDateParsingUtils - Class in org.gbif.api.util
Utility class that parses date values, the allowed date formats are: "yyyy-MM-dd", "yyyy-MM" or "yyyy".
IsoDateParsingUtils.IsoDateFormat - Enum in org.gbif.api.util
Enumerations with the allowed date formats by the occurrence search service.
IsoDeserializer() - Constructor for class org.gbif.api.vocabulary.Country.IsoDeserializer
 
isOfficial() - Method in enum org.gbif.api.vocabulary.Country
Note this includes Kosovo (XK).
IsoKeySerializer() - Constructor for class org.gbif.api.vocabulary.Language.IsoKeySerializer
 
IsoSerializer() - Constructor for class org.gbif.api.vocabulary.Country.IsoSerializer
 
IsoSerializer() - Constructor for class org.gbif.api.vocabulary.Language.IsoSerializer
 
isOutdated() - Method in class org.gbif.api.model.collections.suggestions.Change
 
isOverridable() - Method in class org.gbif.api.model.collections.SourceableField.Source
 
isOverwritten() - Method in class org.gbif.api.model.collections.suggestions.Change
 
isParsable(String) - Static method in class org.gbif.api.model.common.DOI
Returns true only if the source can be parsed into a DOI.
isParsable() - Method in enum org.gbif.api.vocabulary.NameType
 
isParsableType() - Method in class org.gbif.api.model.checklistbank.ParsedName
 
isParsed() - Method in class org.gbif.api.model.checklistbank.ParsedName
A flag indicating if a name could not be parsed at all.
isParsedPartially() - Method in class org.gbif.api.model.checklistbank.ParsedName
The GBIF name parser cannot always parse the entire name.
isPersonalCollection() - Method in class org.gbif.api.model.collections.Collection
Does this collections belong to an individual?.
isPlural() - Method in class org.gbif.api.model.checklistbank.VernacularName
This value is true if the vernacular name it qualifies refers to a plural form of the name.
isPreferred() - Method in class org.gbif.api.model.checklistbank.VernacularName
This term is true if the source citing the use of this vernacular name indicates the usage has some preference or specific standing over other possible vernacular names used for the species.
isPrimary() - Method in class org.gbif.api.model.collections.Contact
 
isPrimary() - Method in class org.gbif.api.model.registry.Contact
 
isProParte() - Method in class org.gbif.api.model.checklistbank.NameUsage
True for pro parte synonyms with multiple accepted usages.
isQualified() - Method in class org.gbif.api.model.checklistbank.ParsedName
 
isRecombination() - Method in class org.gbif.api.model.checklistbank.ParsedName
 
isRegistered() - Method in enum org.gbif.api.model.common.DoiStatus
 
isRestrictedToCode() - Method in enum org.gbif.api.vocabulary.Rank
 
isSpeciesAggregateOrBelow() - Method in enum org.gbif.api.vocabulary.Rank
 
isSpeciesOrBelow() - Method in enum org.gbif.api.vocabulary.Rank
 
isSpellCheck() - Method in class org.gbif.api.model.common.search.SearchRequest
 
ISSUE - Static variable in class org.gbif.api.model.metrics.cube.OccurrenceCube
 
isSuprageneric() - Method in enum org.gbif.api.vocabulary.Rank
 
isSupraspecific() - Method in enum org.gbif.api.vocabulary.Rank
 
isSynonym() - Method in class org.gbif.api.model.checklistbank.NameUsage
Convenience method using the taxonomicStatus field.
isSynonym() - Method in class org.gbif.api.model.checklistbank.NameUsageMatch
 
isSynonym() - Method in class org.gbif.api.model.checklistbank.search.NameUsageSearchResult
Convenience method using the taxonomicStatus field.
isSynonym() - Method in class org.gbif.api.model.checklistbank.search.NameUsageSuggestResult
 
isSynonym() - Method in class org.gbif.api.v2.NameUsageMatch2
 
isSynonym() - Method in enum org.gbif.api.vocabulary.TaxonomicStatus
 
isTermValueBlank(String) - Static method in class org.gbif.dwc.terms.Terms
Check if the value provided should be considered "blank" in the context of a Term value.
isTerrestrial() - Method in class org.gbif.api.model.checklistbank.NameUsageContainer
Convenience method that analyzes all species profile records for terrestrial habitat flags.
isTerrestrial() - Method in class org.gbif.api.model.checklistbank.SpeciesProfile
A Boolean flag indicating the taxon is a terrestrial organism, i.e.
isTypeSpecimen() - Method in enum org.gbif.api.vocabulary.TypeStatus
 
isUncomparable() - Method in enum org.gbif.api.vocabulary.Rank
True for names of informal ranks that represent a range of ranks really and therefore cannot safely be compared to other ranks in all cases.
isValid() - Method in class org.gbif.api.model.crawler.DwcaValidationReport
 
isValid() - Method in class org.gbif.api.model.crawler.GenericValidationReport
 
isValid() - Method in class org.gbif.api.model.crawler.OccurrenceValidationReport
 
isValid(URI, ConstraintValidatorContext) - Method in class org.gbif.api.util.URIValidator
Implements the validation logic, checking if a URI is valid or not.
isValid(String, ConstraintValidatorContext) - Method in class org.gbif.api.util.validators.email.EmailConstraintValidator
 
isValid(String) - Method in class org.gbif.api.util.validators.identifierschemes.HuhValidator
 
isValid(String) - Method in interface org.gbif.api.util.validators.identifierschemes.IdentifierSchemeValidator
Is the identifier value valid?.
isValid(String) - Method in class org.gbif.api.util.validators.identifierschemes.IhIrnValidator
 
isValid(String) - Method in class org.gbif.api.util.validators.identifierschemes.IsniValidator
 
isValid(String) - Method in class org.gbif.api.util.validators.identifierschemes.Mod112
 
isValid(String) - Method in class org.gbif.api.util.validators.identifierschemes.OrcidValidator
 
isValid(String) - Method in class org.gbif.api.util.validators.identifierschemes.OtherValidator
 
isValid(String) - Method in class org.gbif.api.util.validators.identifierschemes.ResearcherIdValidator
 
isValid(String) - Method in class org.gbif.api.util.validators.identifierschemes.ViafValidator
 
isValid(String) - Method in class org.gbif.api.util.validators.identifierschemes.WikidataValidator
 
isValidCitesIdentifier(String) - Static method in class org.gbif.api.util.IdentifierUtils
CITES identifier validation according to https://cites.org/eng/common/reg/e_si.html.
isValidDate(String) - Method in enum org.gbif.api.util.IsoDateParsingUtils.IsoDateFormat
Checks if the parameter "value" can be parsed using the date format.
isValidWikidataIdentifier(String) - Static method in class org.gbif.api.util.IdentifierUtils
 
isVerbose() - Method in class org.gbif.api.model.collections.lookup.LookupParams
 
isVocabulary(Term) - Static method in class org.gbif.dwc.terms.Terms
 
Iterables - Class in org.gbif.api.util.iterables
Factory constructing registry entity iterables using specific pagers under the hood.
iterator() - Method in class org.gbif.api.util.iterables.BasePager
 
IUCN_DATASET_KEY - Static variable in class org.gbif.api.model.Constants
The dataset key for the IUCN Red List of Threatened Species
IucnTerm - Enum in org.gbif.dwc.terms
 

K

KeyCodeNameResult - Class in org.gbif.api.model.registry.search.collections
A utility container for holding the key, code and name of an entity.
KeyCodeNameResult() - Constructor for class org.gbif.api.model.registry.search.collections.KeyCodeNameResult
 
KeyCodeNameResult(UUID, String, String) - Constructor for class org.gbif.api.model.registry.search.collections.KeyCodeNameResult
 
KeyTitleResult - Class in org.gbif.api.model.registry.search
A utility container for holding only the title and key of an entity.
KeyTitleResult() - Constructor for class org.gbif.api.model.registry.search.KeyTitleResult
 
KeyTitleResult(UUID, String) - Constructor for class org.gbif.api.model.registry.search.KeyTitleResult
 
KeywordCollection - Class in org.gbif.api.model.registry.eml
Allows a collection of keywords which may declare a thesaurus from which they come from.
KeywordCollection() - Constructor for class org.gbif.api.model.registry.eml.KeywordCollection
 
KeywordCollection(String, Set<String>) - Constructor for class org.gbif.api.model.registry.eml.KeywordCollection
 
Keywords - Interface in org.gbif.api.model.registry.eml
 
Kingdom - Enum in org.gbif.api.vocabulary
A simple enumeration of all kingdoms found in the GBIF Backbone Taxonomy and also Catalogue of Life.

L

Language - Enum in org.gbif.api.vocabulary
Enumeration for all ISO 639-1 language codes using 2 lower case letters.
Language.IsoKeySerializer - Class in org.gbif.api.vocabulary
 
Language.IsoSerializer - Class in org.gbif.api.vocabulary
Serializes the value in a 3 letter ISO format.
Language.LenientDeserializer - Class in org.gbif.api.vocabulary
Deserializes the value from a 3 letter ISO format or the enumeration name itself to maintain as much backwards compatibility as possible with e.g.
Language.LenientKeyDeserializer - Class in org.gbif.api.vocabulary
 
LANGUAGES - Static variable in enum org.gbif.api.vocabulary.Language
 
LAT_DEGREE_IN_METER - Static variable in class org.gbif.api.util.LengthUtils
 
latDegreeToMeters(double) - Static method in class org.gbif.api.util.LengthUtils
Latitude degrees are roughly linear to meters on the earth spheroid.
latestDate(String) - Method in enum org.gbif.api.util.IsoDateParsingUtils.IsoDateFormat
Returns the latest date of a possible open range, e.g.
LengthUtils - Class in org.gbif.api.util
 
LengthUtils() - Constructor for class org.gbif.api.util.LengthUtils
 
LenientDeserializer() - Constructor for class org.gbif.api.vocabulary.Language.LenientDeserializer
 
lenientEquals(Address) - Method in class org.gbif.api.model.collections.Address
 
lenientEquals(Collection) - Method in class org.gbif.api.model.collections.Collection
 
lenientEquals(Contact) - Method in class org.gbif.api.model.collections.Contact
 
lenientEquals(Institution) - Method in class org.gbif.api.model.collections.Institution
 
lenientEquals(OccurrenceMapping) - Method in class org.gbif.api.model.collections.OccurrenceMapping
 
lenientEquals(PipelineStep) - Method in class org.gbif.api.model.pipelines.PipelineStep
 
lenientEquals(Comment) - Method in class org.gbif.api.model.registry.Comment
A lenient equality check ignoring server side fields.
lenientEquals(Contact) - Method in class org.gbif.api.model.registry.Contact
This implementation of the Contact.equals(Object) method does only check business equality and disregards automatically set and maintained fields like createdBy, key and others.
lenientEquals(Dataset) - Method in class org.gbif.api.model.registry.Dataset
Only checks the persisted properties, excluding the server controlled fields (key, created, license etc).
lenientEquals(Endpoint) - Method in class org.gbif.api.model.registry.Endpoint
Does not include server controlled values, or nested properties.
lenientEquals(Identifier) - Method in class org.gbif.api.model.registry.Identifier
A lenient equality check ignoring server controlled values (createdBy, key etc).
lenientEquals(Installation) - Method in class org.gbif.api.model.registry.Installation
Does not include the nested properties, or server controlled values (key, createdBy etc) or the password, for security reasons.
LenientEquals<T> - Interface in org.gbif.api.model.registry
An interface to allow model objects to offer a consistent lenient equality check.
lenientEquals(T) - Method in interface org.gbif.api.model.registry.LenientEquals
Leniently tests if the objects are the same.
lenientEquals(MachineTag) - Method in class org.gbif.api.model.registry.MachineTag
This implementation of the MachineTag.equals(Object) method does only check business equality and disregards automatically set and maintained fields like createdBy, key and possibly others in the future.
lenientEquals(Metadata) - Method in class org.gbif.api.model.registry.Metadata
Does not include the key or server controlled values (created, createdBy etc).
lenientEquals(Network) - Method in class org.gbif.api.model.registry.Network
Tests persisted fields, excluding the server controlled values such as key and createdBy.
lenientEquals(Node) - Method in class org.gbif.api.model.registry.Node
Compares the entities for business logic equality using a very lenient approach.
lenientEquals(Organization) - Method in class org.gbif.api.model.registry.Organization
A lenient equality check for business logic uniqueness.
lenientEquals(Tag) - Method in class org.gbif.api.model.registry.Tag
A lenient test that returns true if they are the same object or have the same value.
lenientEquals(T, T) - Static method in class org.gbif.api.util.LenientEqualsUtils
 
LenientEqualsUtils - Class in org.gbif.api.util
 
LenientKeyDeserializer() - Constructor for class org.gbif.api.vocabulary.Language.LenientKeyDeserializer
 
LessThanOrEqualsPredicate<S extends SearchParameter> - Class in org.gbif.api.model.predicate
This predicate checks if its key is less or equal than its value.
LessThanOrEqualsPredicate(S, String) - Constructor for class org.gbif.api.model.predicate.LessThanOrEqualsPredicate
 
LessThanPredicate<S extends SearchParameter> - Class in org.gbif.api.model.predicate
This predicate checks if its key is less than its value.
LessThanPredicate(S, String) - Constructor for class org.gbif.api.model.predicate.LessThanPredicate
 
License - Enum in org.gbif.api.vocabulary
Enumeration of the set of licenses GBIF supports for applying to a dataset.
LicenseJsonDeserializer() - Constructor for class org.gbif.api.jackson.LicenseSerde.LicenseJsonDeserializer
 
LicenseJsonSerializer() - Constructor for class org.gbif.api.jackson.LicenseSerde.LicenseJsonSerializer
 
LicenseMixin - Interface in org.gbif.api.ws.mixin
Mixin interface used to serialize license enums into urls.
LicenseSerde - Class in org.gbif.api.jackson
Jackson JsonSerializer and Jackson JsonDeserializer classes for License.
LicenseSerde() - Constructor for class org.gbif.api.jackson.LicenseSerde
 
LicenseSerde.LicenseJsonDeserializer - Class in org.gbif.api.jackson
Jackson JsonDeserializer for License.
LicenseSerde.LicenseJsonSerializer - Class in org.gbif.api.jackson
Jackson JsonSerializer for License.
LifeStage - Enum in org.gbif.api.vocabulary
Deprecated.
LikePredicate<S extends SearchParameter> - Class in org.gbif.api.model.predicate
This predicate checks if its key is LIKE its value.
LikePredicate(S, String, Boolean) - Constructor for class org.gbif.api.model.predicate.LikePredicate
 
Lineage - Class in org.gbif.api.model.event
Lineage class to represent relations between events.
Lineage() - Constructor for class org.gbif.api.model.event.Lineage
 
LINNEAN_RANKS - Static variable in enum org.gbif.api.vocabulary.Rank
All main Linnean ranks ordered.
LinneanClassification - Interface in org.gbif.api.model.common
A flat taxonomic classification using the major, Linnean ranks with verbatim names.
LinneanClassificationKeys - Interface in org.gbif.api.model.common
A flat taxonomic classification using the major, Linnean ranks with verbatim names and integer based keys.
list(UUID) - Method in interface org.gbif.api.service.checklistbank.DatasetMetricsService
 
list(Locale, UUID, String, Pageable) - Method in interface org.gbif.api.service.checklistbank.NameUsageService
Page through all usages across all or one checklists.
list(Status, Type, String, UUID, Pageable) - Method in interface org.gbif.api.service.collections.ChangeSuggestionService
 
list(CollectionSearchRequest) - Method in interface org.gbif.api.service.collections.CollectionService
Pages Collection entities based on the parameters received.
list(InstitutionSearchRequest) - Method in interface org.gbif.api.service.collections.InstitutionService
Pages Institution entities based on the parameters received.
list(Pageable) - Method in interface org.gbif.api.service.common.CrudService
Lists all entity.
list(DatasetRequestSearchParams) - Method in interface org.gbif.api.service.registry.DatasetService
Provides paging service to list datasets that can be filtered by multiple parameters.
list(InstallationRequestSearchParams) - Method in interface org.gbif.api.service.registry.InstallationService
Provides paging service to list installations that can be filtered by multiple parameters.
list(Pageable) - Method in interface org.gbif.api.service.registry.NetworkEntityService
Deprecated.
list(NetworkRequestSearchParams) - Method in interface org.gbif.api.service.registry.NetworkService
Provides paging service to list networks that can be filtered by multiple parameters.
list(NodeRequestSearchParams) - Method in interface org.gbif.api.service.registry.NodeService
Provides paging service to list nodes that can be filtered by multiple parameters.
list(Pageable, Set<Download.Status>, String) - Method in interface org.gbif.api.service.registry.OccurrenceDownloadService
Retrieves a pageable result of all the downloads, optionally the downloads can be filtered by status and source.
list(OrganizationRequestSearchParams) - Method in interface org.gbif.api.service.registry.OrganizationService
Provides paging service to list organizations that can be filtered by multiple parameters.
list(MachineTaggable, TagNamespace) - Static method in class org.gbif.api.util.MachineTagUtils
 
list(MachineTaggable, TagName) - Static method in class org.gbif.api.util.MachineTagUtils
 
list(MachineTaggable, String, String) - Static method in class org.gbif.api.util.MachineTagUtils
 
listAbortedDatasetProcesses(Pageable) - Method in interface org.gbif.api.service.registry.DatasetProcessStatusService
Retrieves a pageable result of all dataset processing statuses that have been aborted in their latest crawl
listActiveCountries() - Method in interface org.gbif.api.service.registry.NodeService
Returns those countries considered active in GBIF.
listByCanonicalName(Locale, String, Pageable, UUID...) - Method in interface org.gbif.api.service.checklistbank.NameUsageService
Page through all usages with a given canonical name across all or some checklists.
listByCountry(Country, DatasetType, Pageable) - Method in interface org.gbif.api.service.registry.DatasetService
Provides paging service to list datasets published, i.e.
listByCountry(Country, Pageable) - Method in interface org.gbif.api.service.registry.OrganizationService
Provides access to all organizations from a country.
listByDataset(UUID, Boolean, Pageable) - Method in interface org.gbif.api.service.registry.DatasetOccurrenceDownloadUsageService
Retrieves a pageable result of the downloads which contain data taken from a dataset.
listByDOI(String, Pageable) - Method in interface org.gbif.api.service.registry.DatasetService
Get a Dataset list from a DOI.
listByEraseAfter(Pageable, String, Long, String) - Method in interface org.gbif.api.service.registry.OccurrenceDownloadService
Retrieves a pageable result of the downloads created by a user in a given status.
listByGroup(String) - Static method in enum org.gbif.dwc.terms.DwcTerm
List all terms that belong to a given group.
listByGroup(String) - Static method in enum org.gbif.dwc.terms.GbifTerm
List all terms that belong to a given group.
listByIdentifier(IdentifierType, String, Pageable) - Method in interface org.gbif.api.service.registry.NetworkEntityService
Deprecated.
listByIdentifier(String, Pageable) - Method in interface org.gbif.api.service.registry.NetworkEntityService
Deprecated.
listByMachineTag(String, String, String, Pageable) - Method in interface org.gbif.api.service.registry.NetworkEntityService
Deprecated.
listByPrefix(MachineTaggable, String, String) - Static method in class org.gbif.api.util.MachineTagUtils
 
listByType(DatasetType, Pageable) - Method in interface org.gbif.api.service.registry.DatasetService
Provides paging service to list datasets published filtered by a particular dataset type.
listByType(InstallationType, Pageable) - Method in interface org.gbif.api.service.registry.InstallationService
Provides paging service to list installations filtered by a particular installation type.
listByUsage(int, Pageable) - Method in interface org.gbif.api.service.checklistbank.NameUsageExtensionService
Returns all extension records for a checklist usage.
listByUser(String, Pageable, Set<Download.Status>, LocalDateTime, Boolean) - Method in interface org.gbif.api.service.registry.OccurrenceDownloadService
Retrieves a pageable result of the downloads created by a user in a given status.
listChildren(int, Locale, Pageable) - Method in interface org.gbif.api.service.checklistbank.NameUsageService
Lists all accepted child name usages for a given parent.
listCombinations(int, Locale) - Method in interface org.gbif.api.service.checklistbank.NameUsageService
Lists all combinations or names at different rank that are based on this basionym, i.e.
listComments(UUID) - Method in interface org.gbif.api.service.registry.CommentService
List all comments of a target entity.
listConstituents(UUID, Pageable) - Method in interface org.gbif.api.service.registry.DatasetService
Pages through constituents of a dataset, i.e.
listConstituents(Pageable) - Method in interface org.gbif.api.service.registry.DatasetService
Pages through all constituent datasets, i.e.
listConstituents(UUID, Pageable) - Method in interface org.gbif.api.service.registry.NetworkService
Pages through dataset constituents of a network, i.e.
listContactPersons(UUID) - Method in interface org.gbif.api.service.collections.ContactService
Lists all the contacts of an entity.
listContacts(UUID) - Method in interface org.gbif.api.service.registry.ContactService
List all contacts of a target entity.
listCountryUsages(String, CountryUsageSortField, SortOrder, Pageable) - Method in interface org.gbif.api.service.registry.OccurrenceDownloadService
 
listDatasetProcessStatus(Pageable) - Method in interface org.gbif.api.service.registry.DatasetProcessStatusService
Retrieves a pageable result of all the dataset processing statuses.
listDatasetProcessStatus(UUID, Pageable) - Method in interface org.gbif.api.service.registry.DatasetProcessStatusService
Lists the DatasetProcessStatus of a dataset.
listDatasetsWithNoEndpoint(Pageable) - Method in interface org.gbif.api.service.registry.DatasetService
Provides access to internal (e.g.
listDatasetUsages(String, Pageable) - Method in interface org.gbif.api.service.registry.OccurrenceDownloadService
Retrieves a pageable result of the dataset usages in a occurrence download.
listDatasetUsages(String, String, DatasetUsageSortField, SortOrder, Pageable) - Method in interface org.gbif.api.service.registry.OccurrenceDownloadService
 
listDeleted(CollectionSearchRequest) - Method in interface org.gbif.api.service.collections.CollectionService
Provides access to deleted collections.
listDeleted(InstitutionSearchRequest) - Method in interface org.gbif.api.service.collections.InstitutionService
Provides access to deleted institutions.
listDeleted(DatasetRequestSearchParams) - Method in interface org.gbif.api.service.registry.DatasetService
Provides access to deleted datasets.
listDeleted(InstallationRequestSearchParams) - Method in interface org.gbif.api.service.registry.InstallationService
Provides access to deleted installations.
listDeleted(OrganizationRequestSearchParams) - Method in interface org.gbif.api.service.registry.OrganizationService
Provides access to deleted organizations.
listDuplicates(Pageable) - Method in interface org.gbif.api.service.registry.DatasetService
Provides access to datasets that are marked as a duplicate of another.
listEndpoints(UUID) - Method in interface org.gbif.api.service.registry.EndpointService
List all endpoints of a target entity.
listGeojson(InstitutionSearchRequest) - Method in interface org.gbif.api.service.collections.InstitutionService
Lists the institutions in GeoJson format.
listGrids(UUID) - Method in interface org.gbif.api.service.registry.DatasetService
Get gridded datasets processing info
listIdentifiers(UUID) - Method in interface org.gbif.api.service.registry.IdentifierService
List all identifiers of a target entity.
listLanguages() - Method in class org.gbif.api.model.checklistbank.TableOfContents
 
listMachineTags(UUID) - Method in interface org.gbif.api.service.registry.MachineTagService
List all machine tags of the entity.
listMetadata(UUID, MetadataType) - Method in interface org.gbif.api.service.registry.DatasetService
Lists all metadata descriptions available for a dataset and optionally filters them by document type.
listMetasync(Pageable) - Method in interface org.gbif.api.service.registry.MetasyncHistoryService
Retrieves a pageable result of all the metasync history records.
listMetasync(UUID, Pageable) - Method in interface org.gbif.api.service.registry.MetasyncHistoryService
Lists the MetasyncHistory of a installation.
listNetworks(UUID) - Method in interface org.gbif.api.service.registry.DatasetService
Lists all networks that this dataset is a constituent of.
listNodeCountries() - Method in interface org.gbif.api.service.registry.NodeService
Returns a list of all countries which do have a GBIF node.
listNonPublishing(Pageable) - Method in interface org.gbif.api.service.registry.InstallationService
Provides access to installations that serve no datasets.
listNonPublishing(Pageable) - Method in interface org.gbif.api.service.registry.OrganizationService
Provides access to organizations that are not publishing (e.g.
listOccurrenceMappings(UUID) - Method in interface org.gbif.api.service.collections.OccurrenceMappingService
List all OccurrenceMapping of a target entity.
listOrganizationUsages(String, String, OrganizationUsageSortField, SortOrder, Pageable) - Method in interface org.gbif.api.service.registry.OccurrenceDownloadService
 
listParents(int, Locale) - Method in interface org.gbif.api.service.checklistbank.NameUsageService
Lists the complete parental hierarchy of a name usage regardless of their ranks.
listPendingEndorsement(Pageable) - Method in interface org.gbif.api.service.registry.OrganizationService
Provides access to organizations that are awaiting their endorsement approval.
listRegisteredTermEnums() - Method in class org.gbif.dwc.terms.TermFactory
 
listRelated(int, Locale, Pageable, UUID...) - Method in interface org.gbif.api.service.checklistbank.NameUsageService
Lists all related checklist usages for a given nub usage.
listRoot(UUID, Locale, Pageable) - Method in interface org.gbif.api.service.checklistbank.NameUsageService
Lists all root usages for a given checklist, i.e.
listSynonyms(int, Locale, Pageable) - Method in interface org.gbif.api.service.checklistbank.NameUsageService
Lists all synonym name usages for a given accepted name usage.
listTags(UUID, String) - Method in interface org.gbif.api.service.registry.TagService
List all tags of a tagged entity.
listTopicEntries(Language) - Method in class org.gbif.api.model.checklistbank.TableOfContents
 
LiteratureRelevance - Enum in org.gbif.api.model.literature
 
LiteratureSearchParameter - Enum in org.gbif.api.model.literature.search
 
LiteratureSearchRequest - Class in org.gbif.api.model.literature.search
 
LiteratureSearchRequest() - Constructor for class org.gbif.api.model.literature.search.LiteratureSearchRequest
 
LiteratureSearchRequest(Pageable) - Constructor for class org.gbif.api.model.literature.search.LiteratureSearchRequest
 
LiteratureSearchRequest(long, int) - Constructor for class org.gbif.api.model.literature.search.LiteratureSearchRequest
 
LiteratureSearchResult - Class in org.gbif.api.model.literature.search
 
LiteratureSearchResult() - Constructor for class org.gbif.api.model.literature.search.LiteratureSearchResult
 
LiteratureTopic - Enum in org.gbif.api.model.literature
 
LiteratureType - Enum in org.gbif.api.model.literature
 
LocalDateTimeDeserializer() - Constructor for class org.gbif.api.jackson.LocalDateTimeSerDe.LocalDateTimeDeserializer
 
LocalDateTimeSerDe - Class in org.gbif.api.jackson
Jackson JsonSerializer and Jackson JsonDeserializer classes for LocalDateTime.
LocalDateTimeSerDe() - Constructor for class org.gbif.api.jackson.LocalDateTimeSerDe
 
LocalDateTimeSerDe.LocalDateTimeDeserializer - Class in org.gbif.api.jackson
Jackson JsonDeserializer for LocalDateTime.
LocalDateTimeSerDe.LocalDateTimeSerializer - Class in org.gbif.api.jackson
Jackson JsonSerializer for LocalDateTime.
LocalDateTimeSerializer() - Constructor for class org.gbif.api.jackson.LocalDateTimeSerDe.LocalDateTimeSerializer
 
lookup(String, Class<T>) - Static method in class org.gbif.api.util.VocabularyUtils
Same as VocabularyUtils.lookupEnum(String, Class) } without IllegalArgumentException.
lookupEnum(String, Class<T>) - Static method in class org.gbif.api.util.VocabularyUtils
Generic method to lookup an enumeration value for a given string based on the name of the enum member.
LookupParams - Class in org.gbif.api.model.collections.lookup
Holds the parameters that the collections lookup accepts.
LookupParams() - Constructor for class org.gbif.api.model.collections.lookup.LookupParams
 
LookupResult - Class in org.gbif.api.model.collections.lookup
Result of a collections lookup that contains the institution and collections matches found.
LookupResult() - Constructor for class org.gbif.api.model.collections.lookup.LookupResult
 
lookupVocabulary(String) - Static method in class org.gbif.api.util.VocabularyUtils
Looks up an enumeration by class name.
lowerEndpoint() - Method in class org.gbif.api.util.Range
 

M

MACHINE_TAG_NAME_PARAM - Static variable in class org.gbif.api.model.registry.search.RequestSearchParams
 
MACHINE_TAG_NAMESPACE_PARAM - Static variable in class org.gbif.api.model.registry.search.RequestSearchParams
 
MACHINE_TAG_VALUE_PARAM - Static variable in class org.gbif.api.model.registry.search.RequestSearchParams
 
MachineTag - Class in org.gbif.api.model.registry
A tag that has a namespace, name and a value.
MachineTag() - Constructor for class org.gbif.api.model.registry.MachineTag
 
MachineTag(String, String, String) - Constructor for class org.gbif.api.model.registry.MachineTag
This is the default constructor to create new Machine Tags which takes all user settable properties.
MachineTag(TagName, String) - Constructor for class org.gbif.api.model.registry.MachineTag
This is the other constructor to create new Machine Tags which takes all user settable properties.
MachineTaggable - Interface in org.gbif.api.model.registry
Generic machine tag interface for entities.
machineTagName(String) - Method in class org.gbif.api.model.collections.request.CollectionSearchRequest.Builder
 
machineTagName(String) - Method in class org.gbif.api.model.collections.request.InstitutionSearchRequest.Builder
 
machineTagNamespace(String) - Method in class org.gbif.api.model.collections.request.CollectionSearchRequest.Builder
 
machineTagNamespace(String) - Method in class org.gbif.api.model.collections.request.InstitutionSearchRequest.Builder
 
MachineTagService - Interface in org.gbif.api.service.registry
Service provides a set of operations on MachineTag.
MachineTagUtils - Class in org.gbif.api.util
Utility class to simplify your life when dealing with machine tags.
machineTagValue(String) - Method in class org.gbif.api.model.collections.request.CollectionSearchRequest.Builder
 
machineTagValue(String) - Method in class org.gbif.api.model.collections.request.InstitutionSearchRequest.Builder
 
MaintenanceUpdateFrequency - Enum in org.gbif.api.vocabulary
Enumeration for describing the frequency with which changes and additions are made to the dataset after the initial dataset is completed.
MapEntryJsonDeserializer() - Constructor for class org.gbif.api.jackson.MapEntrySerde.MapEntryJsonDeserializer
Deprecated.
 
MapEntryJsonSerializer() - Constructor for class org.gbif.api.jackson.MapEntrySerde.MapEntryJsonSerializer
Deprecated.
 
MapEntrySerde - Class in org.gbif.api.jackson
Deprecated.
MapEntrySerde() - Constructor for class org.gbif.api.jackson.MapEntrySerde
Deprecated.
 
MapEntrySerde.MapEntryJsonDeserializer - Class in org.gbif.api.jackson
Deprecated.
MapEntrySerde.MapEntryJsonSerializer - Class in org.gbif.api.jackson
Deprecated.
markAllPipelineExecutionAsFinished() - Method in interface org.gbif.api.service.pipelines.PipelinesHistoryService
Mark all pipeline executions as finished to clean running UI
markPipelineExecutionIfFinished(long) - Method in interface org.gbif.api.service.pipelines.PipelinesHistoryService
Mark pipeline execution as finished when all pipelin steps are finished
markPipelineStatusAsAborted(long) - Method in interface org.gbif.api.service.pipelines.PipelinesHistoryService
Change status to ABORTED and set finished date if state is RUNNING, QUEUED or SUBMITTED, and set pipeline execution as finished
MasterSourceMetadata - Class in org.gbif.api.model.collections
Metadata to sync GRSciColl entities with their master sources.
MasterSourceMetadata() - Constructor for class org.gbif.api.model.collections.MasterSourceMetadata
 
MasterSourceMetadata(Source, String) - Constructor for class org.gbif.api.model.collections.MasterSourceMetadata
 
masterSourceType(MasterSourceType) - Method in class org.gbif.api.model.collections.request.CollectionSearchRequest.Builder
 
masterSourceType(MasterSourceType) - Method in class org.gbif.api.model.collections.request.InstitutionSearchRequest.Builder
 
MasterSourceType - Enum in org.gbif.api.vocabulary.collections
Type of GRSciColl master source.
Match<T extends EntityMatched> - Class in org.gbif.api.model.collections.lookup
Used in the LookupResult to express how good an entity matches.
Match() - Constructor for class org.gbif.api.model.collections.lookup.Match
 
Match() - Constructor for class org.gbif.api.model.collections.search.CollectionsSearchResponse.Match
 
match(String, Rank, LinneanClassification, boolean, boolean) - Method in interface org.gbif.api.service.checklistbank.NameUsageMatchingService
Tries to match a scientific name with an optional classification given as individual parameters.
Match.MatchType - Enum in org.gbif.api.model.collections.lookup
 
Match.Reason - Enum in org.gbif.api.model.collections.lookup
 
Match.Status - Enum in org.gbif.api.model.collections.lookup
 
MATCH_TYPE_COMPARATOR - Static variable in class org.gbif.api.model.collections.lookup.Match
 
MeasurementOrFact - Class in org.gbif.api.model.occurrence
A measurement or fact about an occurrence.
MeasurementOrFact() - Constructor for class org.gbif.api.model.occurrence.MeasurementOrFact
 
MediaObject - Class in org.gbif.api.model.common
Metadata for a multimedia object representing an image, video or audio file.
MediaObject() - Constructor for class org.gbif.api.model.common.MediaObject
 
MediaType - Enum in org.gbif.api.vocabulary
Based on the DC types vocabulary.
MergeParams - Class in org.gbif.api.model.collections.merge
 
MergeParams() - Constructor for class org.gbif.api.model.collections.merge.MergeParams
 
message(String) - Method in class org.gbif.api.model.common.messaging.Response.Builder
 
messageKey(String) - Method in class org.gbif.api.model.common.messaging.Response.Builder
 
Metadata - Class in org.gbif.api.model.registry
 
Metadata() - Constructor for class org.gbif.api.model.registry.Metadata
 
MetadataType - Enum in org.gbif.api.vocabulary
Enumeration for all possible metadata types.
MetasyncHistory - Class in org.gbif.api.model.registry.metasync
Metadata synchronization historical information.
MetasyncHistory() - Constructor for class org.gbif.api.model.registry.metasync.MetasyncHistory
 
MetasyncHistoryService - Interface in org.gbif.api.service.registry
Interface to access and persists historical metadata synchronization results.
MetasyncResult - Enum in org.gbif.api.model.registry.metasync
Enumeration of all the different categories of results we want to report on during metadata synchronisation.
metersToLatDegree(double) - Static method in class org.gbif.api.util.LengthUtils
Latitude degrees are roughly linear to meters on the earth spheroid.
MetricInfo() - Constructor for class org.gbif.api.model.pipelines.PipelineStep.MetricInfo
 
MetricInfo(String, String) - Constructor for class org.gbif.api.model.pipelines.PipelineStep.MetricInfo
 
Mixins - Class in org.gbif.api.ws.mixin
Mixins are typically used to leave serialization-oriented annotations outside the models to avoid introducing coupling on a specific SerDe.
Mod112 - Class in org.gbif.api.util.validators.identifierschemes
Util class that generates a validates Mod11,2 checksums.
MODIFIED_PARAM - Static variable in class org.gbif.api.model.registry.search.RequestSearchParams
 
MultimediaService - Interface in org.gbif.api.service.checklistbank
The public interface providing methods for retrieving NameUsageMediaObjects.

N

name - Variable in exception org.gbif.api.exception.UnparsableException
 
name(String) - Method in class org.gbif.api.model.collections.request.CollectionSearchRequest.Builder
 
name(String) - Method in class org.gbif.api.model.collections.request.InstitutionSearchRequest.Builder
 
name() - Method in interface org.gbif.api.model.common.search.SearchParameter
 
name() - Method in interface org.gbif.api.model.pipelines.InterpretationType
 
NameParser - Interface in org.gbif.api.service.checklistbank
Interface for parsing scientific names.
NamePart - Enum in org.gbif.api.vocabulary
Enumeration to indicate a part of a canonical scientific name.
namespace() - Method in enum org.gbif.dwc.terms.AcefTerm
 
namespace() - Method in enum org.gbif.dwc.terms.AcTerm
 
namespace() - Method in class org.gbif.dwc.terms.BibTexTerm
 
namespace() - Method in enum org.gbif.dwc.terms.DcElement
 
namespace() - Method in enum org.gbif.dwc.terms.DcTerm
 
namespace() - Method in enum org.gbif.dwc.terms.DwcaTerm
 
namespace() - Method in enum org.gbif.dwc.terms.DwcTerm
 
namespace() - Method in enum org.gbif.dwc.terms.GadmTerm
 
namespace() - Method in enum org.gbif.dwc.terms.GbifInternalTerm
 
namespace() - Method in enum org.gbif.dwc.terms.GbifTerm
 
namespace() - Method in enum org.gbif.dwc.terms.IucnTerm
 
namespace() - Method in enum org.gbif.dwc.terms.PlaziTerm
 
namespace() - Method in interface org.gbif.dwc.terms.Term
The namespace the terms are in.
namespace() - Method in class org.gbif.dwc.terms.UnknownTerm
 
namespace() - Method in enum org.gbif.dwc.terms.XmpRightsTerm
 
namespace() - Method in enum org.gbif.dwc.terms.XmpTerm
 
NameType - Enum in org.gbif.api.vocabulary
A short classification of scientific name strings used in Checklist Bank.
nameTypeStatusList() - Static method in enum org.gbif.api.vocabulary.TypeStatus
 
NameUsage - Class in org.gbif.api.model.checklistbank
A usage of a scientific name according to one particular Checklist including the GBIF Taxonomic Backbone, the NUB.
NameUsage() - Constructor for class org.gbif.api.model.checklistbank.NameUsage
 
NameUsage(NameUsage) - Constructor for class org.gbif.api.model.checklistbank.NameUsage
 
NameUsageContainer - Class in org.gbif.api.model.checklistbank
An extension to a NameUsage adding all further properties that are not eagerly loaded.
NameUsageContainer() - Constructor for class org.gbif.api.model.checklistbank.NameUsageContainer
Default constructor.
NameUsageContainer(NameUsage) - Constructor for class org.gbif.api.model.checklistbank.NameUsageContainer
Constructs a NameUsageContainer from an existing NameUsage instance.
NameUsageExtension - Interface in org.gbif.api.model.checklistbank
 
NameUsageExtensionService<T> - Interface in org.gbif.api.service.checklistbank
Parameterized service interface for model classes extending a NameUsage.
NameUsageIssue - Enum in org.gbif.api.vocabulary
Enumeration of issues for each name usage record encountered during checklist processing.
NameUsageMatch - Class in org.gbif.api.model.checklistbank
The resulting lookup of a name usage match.
NameUsageMatch() - Constructor for class org.gbif.api.model.checklistbank.NameUsageMatch
 
NameUsageMatch.MatchType - Enum in org.gbif.api.model.checklistbank
 
NameUsageMatch2 - Class in org.gbif.api.v2
NameUsageMatch for API v2 See https://github.com/gbif/checklistbank/issues/49
NameUsageMatch2() - Constructor for class org.gbif.api.v2.NameUsageMatch2
 
NameUsageMatch2.Diagnostics - Class in org.gbif.api.v2
 
NameUsageMatch2.Nomenclature - Class in org.gbif.api.v2
 
NameUsageMatchingService - Interface in org.gbif.api.service.checklistbank
A lookup service that fuzzy matches classified scientific names against a body of names.
NameUsageMediaObject - Class in org.gbif.api.model.checklistbank
An extension to the common MediaObject that adds a source taxon key property from checklistbank.
NameUsageMediaObject() - Constructor for class org.gbif.api.model.checklistbank.NameUsageMediaObject
 
NameUsageMetrics - Class in org.gbif.api.model.checklistbank
Basic metrics for a single name usage.
NameUsageMetrics() - Constructor for class org.gbif.api.model.checklistbank.NameUsageMetrics
 
NameUsageSearchParameter - Enum in org.gbif.api.model.checklistbank.search
Each value in the enum represents a search parameter or facet of the name usage search.
NameUsageSearchRequest - Class in org.gbif.api.model.checklistbank.search
A name usage specific search request with convenience methods to add enum based search filters.
NameUsageSearchRequest() - Constructor for class org.gbif.api.model.checklistbank.search.NameUsageSearchRequest
 
NameUsageSearchRequest(Pageable) - Constructor for class org.gbif.api.model.checklistbank.search.NameUsageSearchRequest
 
NameUsageSearchRequest(long, int) - Constructor for class org.gbif.api.model.checklistbank.search.NameUsageSearchRequest
 
NameUsageSearchRequest.NameUsageQueryField - Enum in org.gbif.api.model.checklistbank.search
 
NameUsageSearchResult - Class in org.gbif.api.model.checklistbank.search
Class used for returning results of a full text search operation.
NameUsageSearchResult() - Constructor for class org.gbif.api.model.checklistbank.search.NameUsageSearchResult
 
NameUsageSearchService - Interface in org.gbif.api.service.checklistbank
Interface that provides search/suggest(autocomplete) operations over NameUsages.
NameUsageService - Interface in org.gbif.api.service.checklistbank
This is the public interface providing methods for retrieving name usages in general, no matter if nub or checklist usage.
NameUsageSuggestRequest - Class in org.gbif.api.model.checklistbank.search
A name usage specific suggest request.
NameUsageSuggestRequest() - Constructor for class org.gbif.api.model.checklistbank.search.NameUsageSuggestRequest
 
NameUsageSuggestResult - Class in org.gbif.api.model.checklistbank.search
Class used for returning results of a suggest operation.
NameUsageSuggestResult() - Constructor for class org.gbif.api.model.checklistbank.search.NameUsageSuggestResult
 
Network - Class in org.gbif.api.model.registry
A GBIF network.
Network() - Constructor for class org.gbif.api.model.registry.Network
 
NETWORK_KEY_PARAM - Static variable in class org.gbif.api.model.registry.search.OrganizationRequestSearchParams
 
networkDatasets(UUID, DatasetType, NetworkService) - Static method in class org.gbif.api.util.iterables.Iterables
Iterates over all constituents of a given network.
NetworkEntity - Interface in org.gbif.api.model.registry
This interface provides a minimal contract that all network entities (The readable version) will adhere to.
NetworkEntityService<T> - Interface in org.gbif.api.service.registry
 
NetworkMixin - Interface in org.gbif.api.ws.mixin
 
NetworkPager - Class in org.gbif.api.util.iterables
Iterates over all datasets belonging to a given network.
NetworkPager(NetworkService, UUID, DatasetType, int) - Constructor for class org.gbif.api.util.iterables.NetworkPager
 
NetworkRequestSearchParams - Class in org.gbif.api.model.registry.search
 
NetworkRequestSearchParams() - Constructor for class org.gbif.api.model.registry.search.NetworkRequestSearchParams
 
NetworkService - Interface in org.gbif.api.service.registry
 
newInstance(String, String, String) - Static method in class org.gbif.api.model.registry.MachineTag
 
newInstance(TagName, String) - Static method in class org.gbif.api.model.registry.MachineTag
 
newRandom() - Static method in class org.gbif.api.model.ChallengeCode
 
newRandom(String) - Static method in class org.gbif.api.model.ChallengeCode
 
nextPage() - Method in class org.gbif.api.model.common.paging.PagingRequest
Increases the offset based on the current limit to be able to request the next page.
nextPage(PagingRequest) - Method in class org.gbif.api.util.iterables.BasePager
 
nextPage(PagingRequest) - Method in class org.gbif.api.util.iterables.CollectionsPager
 
nextPage(PagingRequest) - Method in class org.gbif.api.util.iterables.DatasetConstituentPager
 
nextPage(PagingRequest) - Method in class org.gbif.api.util.iterables.DatasetOccurrenceDownloadUsagesPager
 
nextPage(PagingRequest) - Method in class org.gbif.api.util.iterables.DatasetPager
 
nextPage(PagingRequest) - Method in class org.gbif.api.util.iterables.DatasetSearchResultsPager
 
nextPage(PagingRequest) - Method in class org.gbif.api.util.iterables.DownloadStatisticPager
 
nextPage(PagingRequest) - Method in class org.gbif.api.util.iterables.InstallationPager
 
nextPage(PagingRequest) - Method in class org.gbif.api.util.iterables.InstitutionsPager
 
nextPage(PagingRequest) - Method in class org.gbif.api.util.iterables.NetworkPager
 
nextPage(PagingRequest) - Method in class org.gbif.api.util.iterables.NodeDatasetPager
 
nextPage(PagingRequest) - Method in class org.gbif.api.util.iterables.NodeOrganizationPager
 
nextPage(PagingRequest) - Method in class org.gbif.api.util.iterables.NodePager
 
nextPage(PagingRequest) - Method in class org.gbif.api.util.iterables.OrganizationPager
 
nextPage(PagingRequest) - Method in class org.gbif.api.util.iterables.OrgHostingPager
 
nextPage(PagingRequest) - Method in class org.gbif.api.util.iterables.OrgPublishingPager
 
Node - Class in org.gbif.api.model.registry
A GBIF participant node.
Node() - Constructor for class org.gbif.api.model.registry.Node
 
NodeDatasetPager - Class in org.gbif.api.util.iterables
Pages through all datasets endorsed by a given node.
NodeDatasetPager(NodeService, UUID, DatasetType, int) - Constructor for class org.gbif.api.util.iterables.NodeDatasetPager
 
NodeMixin - Interface in org.gbif.api.ws.mixin
 
NodeOrganizationPager - Class in org.gbif.api.util.iterables
Pages through all organizations endorsed by a given node.
NodeOrganizationPager(NodeService, UUID, int) - Constructor for class org.gbif.api.util.iterables.NodeOrganizationPager
 
NodePager - Class in org.gbif.api.util.iterables
Pages through all organizations optionally filtering by country.
NodePager(NodeService, int) - Constructor for class org.gbif.api.util.iterables.NodePager
 
NodeRequestSearchParams - Class in org.gbif.api.model.registry.search
 
NodeRequestSearchParams() - Constructor for class org.gbif.api.model.registry.search.NodeRequestSearchParams
 
nodes(NodeService) - Static method in class org.gbif.api.util.iterables.Iterables
Iterate over all endorsing nodes
NodeService - Interface in org.gbif.api.service.registry
Actions on a GBIF node.
NodeType - Enum in org.gbif.api.vocabulary
Enumeration for all possible node types.
NomenclaturalCode - Enum in org.gbif.api.vocabulary
Enumeration representing the different nomenclatoral codes found in biology for scientific names.
NomenclaturalStatus - Enum in org.gbif.api.vocabulary
Vocabulary for the nomenclatural status of a name.
Nomenclature() - Constructor for class org.gbif.api.v2.NameUsageMatch2.Nomenclature
 
none() - Static method in class org.gbif.api.model.collections.lookup.Match
 
none(Match.Status) - Static method in class org.gbif.api.model.collections.lookup.Match
 
normaliseTerm(String) - Static method in class org.gbif.dwc.terms.TermFactory
 
normalize(String) - Method in class org.gbif.api.util.validators.identifierschemes.HuhValidator
 
normalize(String) - Method in interface org.gbif.api.util.validators.identifierschemes.IdentifierSchemeValidator
Transforms the value parameter into a recommended value according to a IdentifierScheme.
normalize(String) - Method in class org.gbif.api.util.validators.identifierschemes.IhIrnValidator
 
normalize(String) - Method in class org.gbif.api.util.validators.identifierschemes.IsniValidator
 
normalize(String) - Method in class org.gbif.api.util.validators.identifierschemes.Mod112
 
normalize(String) - Method in class org.gbif.api.util.validators.identifierschemes.OrcidValidator
 
normalize(String) - Method in class org.gbif.api.util.validators.identifierschemes.OtherValidator
 
normalize(String) - Method in class org.gbif.api.util.validators.identifierschemes.ResearcherIdValidator
 
normalize(String) - Method in class org.gbif.api.util.validators.identifierschemes.ViafValidator
 
normalize(String) - Method in class org.gbif.api.util.validators.identifierschemes.WikidataValidator
 
normAlts - Variable in enum org.gbif.dwc.terms.DwcTerm
 
normAlts - Variable in enum org.gbif.dwc.terms.GadmTerm
 
normAlts - Variable in enum org.gbif.dwc.terms.GbifTerm
 
normAlts - Variable in enum org.gbif.dwc.terms.IucnTerm
 
normQName - Variable in enum org.gbif.dwc.terms.DwcTerm
 
notifyAbsentIdentifiers(UUID, int, long, String) - Method in interface org.gbif.api.service.pipelines.PipelinesHistoryService
Sends a notification to the data administrators about absent identifiers issues with the dataset.
NoTimezoneDateJsonSerializer() - Constructor for class org.gbif.api.jackson.DateSerde.NoTimezoneDateJsonSerializer
 
notOtherOrUnknown() - Method in enum org.gbif.api.vocabulary.Rank
 
NotPredicate - Class in org.gbif.api.model.predicate
This predicate negates its subpredicate.
NotPredicate(Predicate) - Constructor for class org.gbif.api.model.predicate.NotPredicate
 
NS - Static variable in class org.gbif.dwc.terms.BibTexTerm
 
NS_URI - Static variable in class org.gbif.dwc.terms.BibTexTerm
 
NUB_DATASET_KEY - Static variable in class org.gbif.api.model.Constants
The dataset key for the GBIF backbone (NUB) taxonomy.
NUB_MAXIMUM_KEY - Static variable in class org.gbif.api.model.Constants
The maximum key for a NUB usage.
NUB_NETWORK_KEY - Static variable in class org.gbif.api.model.Constants
The network key for the GBIF backbone sources.
nubUsageID() - Method in enum org.gbif.api.vocabulary.Kingdom
Deprecated.
please use nubUsageKey() instead
nubUsageKey() - Method in enum org.gbif.api.vocabulary.Kingdom
 
NullToNotFound - Annotation Type in org.gbif.api.annotation
Annotation that marks a resource method to throw a NotFoundException (becomes http 404) when null is returned by the method.
numberSpecimens(String) - Method in class org.gbif.api.model.collections.request.CollectionSearchRequest.Builder
 
numberSpecimens(String) - Method in class org.gbif.api.model.collections.request.InstitutionSearchRequest.Builder
 

O

OBIS_NETWORK_KEY - Static variable in class org.gbif.api.model.Constants
The network key for the Ocean Biodiversity Information System (OBIS).
Occurrence - Class in org.gbif.api.model.occurrence
Represents an Occurrence as interpreted by GBIF, adding typed properties on top of the verbatim ones.
Occurrence() - Constructor for class org.gbif.api.model.occurrence.Occurrence
 
Occurrence(VerbatimOccurrence) - Constructor for class org.gbif.api.model.occurrence.Occurrence
Create occurrence instance from existing verbatim one, copying over all data.
OCCURRENCE_DATASET_SUBTYPES - Static variable in enum org.gbif.api.vocabulary.DatasetSubtype
A set of all DatasetSubtype that belong to DatasetType OCCURRENCE.
occurrenceCount(String) - Method in class org.gbif.api.model.collections.request.CollectionSearchRequest.Builder
 
occurrenceCount(String) - Method in class org.gbif.api.model.collections.request.InstitutionSearchRequest.Builder
 
OccurrenceCountryIndexService - Interface in org.gbif.api.service.occurrence
Supports the listing of countries having occurrence records.
OccurrenceCube - Class in org.gbif.api.model.metrics.cube
The occurrence cube dimension definitions and the way in which they are rolled up into counts.
OccurrenceDatasetIndexService - Interface in org.gbif.api.service.occurrence
Supports the listing of datasets having occurrence records.
occurrenceDatasetsForCountry(Country) - Method in interface org.gbif.api.service.occurrence.OccurrenceDatasetIndexService
This provides a map of occurrence dataset keys to the number of records matching the given country.
occurrenceDatasetsForNubKey(int) - Method in interface org.gbif.api.service.occurrence.OccurrenceDatasetIndexService
This provides a map of occurrence dataset keys to the number of records matching the given nub key.
OccurrenceDistributionIndexService - Interface in org.gbif.api.service.occurrence
Supports listing occurrence counts by known dimensions.
OccurrenceDownloadService - Interface in org.gbif.api.service.registry
Interface to access and persist information about occurrence download events.
OccurrenceIssue - Enum in org.gbif.api.vocabulary
An enumeration of validation rules for single occurrence records.
OccurrenceMappeable - Interface in org.gbif.api.model.collections
Generic OccurrenceMapping interface for entities.
OccurrenceMapping - Class in org.gbif.api.model.collections
Models the mapping of a GRSciColl institution or collection to an occurrence record.
OccurrenceMapping() - Constructor for class org.gbif.api.model.collections.OccurrenceMapping
 
OccurrenceMapping(String, String, UUID) - Constructor for class org.gbif.api.model.collections.OccurrenceMapping
 
OccurrenceMapping(String, String, UUID, String) - Constructor for class org.gbif.api.model.collections.OccurrenceMapping
 
OccurrenceMappingService - Interface in org.gbif.api.service.collections
Service that provides a set of operations on OccurrenceMapping.
OccurrenceMixin - Interface in org.gbif.api.ws.mixin
 
OccurrencePersistenceStatus - Enum in org.gbif.api.vocabulary
These are the possible states of an Occurrence as it moves through the processing and persistence chain.
OccurrencePredicateSearchRequest - Class in org.gbif.api.model.occurrence.search
Search request that uses a predicate filter like the ones used un downloads.
OccurrencePredicateSearchRequest() - Constructor for class org.gbif.api.model.occurrence.search.OccurrencePredicateSearchRequest
 
OccurrenceRelation - Class in org.gbif.api.model.occurrence
Occurrence relations based on the dwc:ResourceRelationship model.
OccurrenceRelation() - Constructor for class org.gbif.api.model.occurrence.OccurrenceRelation
 
OccurrenceSchemaType - Enum in org.gbif.api.vocabulary
The slightly simplified standard schemas that a crawled occurrence record could be built in.
OccurrenceSearchParameter - Enum in org.gbif.api.model.occurrence.search
Supported query parameters by the occurrence search and download service.
OccurrenceSearchRequest - Class in org.gbif.api.model.occurrence.search
Request class for issuing search request to the occurrence search service.
OccurrenceSearchRequest() - Constructor for class org.gbif.api.model.occurrence.search.OccurrenceSearchRequest
 
OccurrenceSearchRequest(long, int) - Constructor for class org.gbif.api.model.occurrence.search.OccurrenceSearchRequest
 
OccurrenceSearchRequest(Pageable) - Constructor for class org.gbif.api.model.occurrence.search.OccurrenceSearchRequest
 
OccurrenceSearchService - Interface in org.gbif.api.service.occurrence
Interface that provides search operations over Occurrences.
OccurrenceService - Interface in org.gbif.api.service.occurrence
 
OccurrenceStatus - Enum in org.gbif.api.vocabulary
A statement about the presence or absence of an occurrence at a location at a time.
OccurrenceValidationReport - Class in org.gbif.api.model.crawler
The rules followed here should match the document at: http://dev.gbif.org/wiki/display/INT/Identifier+problems+and+how+to+solve+them.
OccurrenceValidationReport(int, int, int, int, int, boolean) - Constructor for class org.gbif.api.model.crawler.OccurrenceValidationReport
 
OFFICIAL_COUNTRIES - Static variable in enum org.gbif.api.vocabulary.Country
 
operationType(Request.OperationType) - Method in class org.gbif.api.model.common.messaging.Request.Builder
 
OrcidValidator - Class in org.gbif.api.util.validators.identifierschemes
Validator for Orcid identifiers.
OrcidValidator() - Constructor for class org.gbif.api.util.validators.identifierschemes.OrcidValidator
 
org.gbif.api.annotation - package org.gbif.api.annotation
 
org.gbif.api.documentation - package org.gbif.api.documentation
 
org.gbif.api.exception - package org.gbif.api.exception
 
org.gbif.api.jackson - package org.gbif.api.jackson
 
org.gbif.api.model - package org.gbif.api.model
 
org.gbif.api.model.checklistbank - package org.gbif.api.model.checklistbank
 
org.gbif.api.model.checklistbank.search - package org.gbif.api.model.checklistbank.search
 
org.gbif.api.model.collections - package org.gbif.api.model.collections
 
org.gbif.api.model.collections.duplicates - package org.gbif.api.model.collections.duplicates
 
org.gbif.api.model.collections.lookup - package org.gbif.api.model.collections.lookup
 
org.gbif.api.model.collections.merge - package org.gbif.api.model.collections.merge
 
org.gbif.api.model.collections.request - package org.gbif.api.model.collections.request
 
org.gbif.api.model.collections.search - package org.gbif.api.model.collections.search
 
org.gbif.api.model.collections.suggestions - package org.gbif.api.model.collections.suggestions
 
org.gbif.api.model.collections.view - package org.gbif.api.model.collections.view
 
org.gbif.api.model.common - package org.gbif.api.model.common
 
org.gbif.api.model.common.export - package org.gbif.api.model.common.export
 
org.gbif.api.model.common.messaging - package org.gbif.api.model.common.messaging
 
org.gbif.api.model.common.paging - package org.gbif.api.model.common.paging
 
org.gbif.api.model.common.search - package org.gbif.api.model.common.search
 
org.gbif.api.model.crawler - package org.gbif.api.model.crawler
 
org.gbif.api.model.event - package org.gbif.api.model.event
 
org.gbif.api.model.literature - package org.gbif.api.model.literature
 
org.gbif.api.model.literature.search - package org.gbif.api.model.literature.search
 
org.gbif.api.model.metrics - package org.gbif.api.model.metrics
 
org.gbif.api.model.metrics.cube - package org.gbif.api.model.metrics.cube
Provides the classes necessary to construct read only requests to well defined cubes.
org.gbif.api.model.occurrence - package org.gbif.api.model.occurrence
 
org.gbif.api.model.occurrence.geo - package org.gbif.api.model.occurrence.geo
 
org.gbif.api.model.occurrence.search - package org.gbif.api.model.occurrence.search
 
org.gbif.api.model.pipelines - package org.gbif.api.model.pipelines
 
org.gbif.api.model.pipelines.ws - package org.gbif.api.model.pipelines.ws
 
org.gbif.api.model.predicate - package org.gbif.api.model.predicate
 
org.gbif.api.model.registry - package org.gbif.api.model.registry
 
org.gbif.api.model.registry.eml - package org.gbif.api.model.registry.eml
 
org.gbif.api.model.registry.eml.curatorial - package org.gbif.api.model.registry.eml.curatorial
 
org.gbif.api.model.registry.eml.geospatial - package org.gbif.api.model.registry.eml.geospatial
 
org.gbif.api.model.registry.eml.temporal - package org.gbif.api.model.registry.eml.temporal
 
org.gbif.api.model.registry.metasync - package org.gbif.api.model.registry.metasync
 
org.gbif.api.model.registry.search - package org.gbif.api.model.registry.search
 
org.gbif.api.model.registry.search.collections - package org.gbif.api.model.registry.search.collections
 
org.gbif.api.model.registry.view - package org.gbif.api.model.registry.view
 
org.gbif.api.query - package org.gbif.api.query
 
org.gbif.api.service.checklistbank - package org.gbif.api.service.checklistbank
 
org.gbif.api.service.collections - package org.gbif.api.service.collections
 
org.gbif.api.service.common - package org.gbif.api.service.common
 
org.gbif.api.service.crawler - package org.gbif.api.service.crawler
 
org.gbif.api.service.metrics - package org.gbif.api.service.metrics
 
org.gbif.api.service.occurrence - package org.gbif.api.service.occurrence
 
org.gbif.api.service.pipelines - package org.gbif.api.service.pipelines
 
org.gbif.api.service.registry - package org.gbif.api.service.registry
 
org.gbif.api.util - package org.gbif.api.util
 
org.gbif.api.util.comparators - package org.gbif.api.util.comparators
 
org.gbif.api.util.formatter - package org.gbif.api.util.formatter
 
org.gbif.api.util.iterables - package org.gbif.api.util.iterables
 
org.gbif.api.util.validators.email - package org.gbif.api.util.validators.email
 
org.gbif.api.util.validators.identifierschemes - package org.gbif.api.util.validators.identifierschemes
 
org.gbif.api.v2 - package org.gbif.api.v2
 
org.gbif.api.vocabulary - package org.gbif.api.vocabulary
 
org.gbif.api.vocabulary.collections - package org.gbif.api.vocabulary.collections
 
org.gbif.api.ws.mixin - package org.gbif.api.ws.mixin
 
org.gbif.dwc.terms - package org.gbif.dwc.terms
 
org.gbif.dwc.terms.jackson - package org.gbif.dwc.terms.jackson
 
Organization - Class in org.gbif.api.model.registry
A GBIF data publisher.
Organization() - Constructor for class org.gbif.api.model.registry.Organization
 
ORGANIZATION_KEY_PARAM - Static variable in class org.gbif.api.model.registry.search.InstallationRequestSearchParams
 
OrganizationContactView - Class in org.gbif.api.model.registry.view
 
OrganizationContactView() - Constructor for class org.gbif.api.model.registry.view.OrganizationContactView
 
OrganizationMixin - Interface in org.gbif.api.ws.mixin
 
OrganizationOccurrenceDownloadUsage - Class in org.gbif.api.model.registry
Represents the information about the usage of one organization in an occurrence download.
OrganizationOccurrenceDownloadUsage() - Constructor for class org.gbif.api.model.registry.OrganizationOccurrenceDownloadUsage
 
OrganizationPager - Class in org.gbif.api.util.iterables
Pages through all organizations optionally filtering by country.
OrganizationPager(OrganizationService, Country, int) - Constructor for class org.gbif.api.util.iterables.OrganizationPager
 
OrganizationRequestSearchParams - Class in org.gbif.api.model.registry.search
 
OrganizationRequestSearchParams() - Constructor for class org.gbif.api.model.registry.search.OrganizationRequestSearchParams
 
organizations(Country, OrganizationService) - Static method in class org.gbif.api.util.iterables.Iterables
 
OrganizationService - Interface in org.gbif.api.service.registry
 
OrganizationUsageSortField - Enum in org.gbif.api.vocabulary
Fields to sort by the organization usages in an occurrence download.
OrgHostingPager - Class in org.gbif.api.util.iterables
Iterates over all datasets hosted by a given organisation.
OrgHostingPager(OrganizationService, UUID, DatasetType, int) - Constructor for class org.gbif.api.util.iterables.OrgHostingPager
 
OrgPublishingPager - Class in org.gbif.api.util.iterables
Iterates over all datasets published by a given organisation.
OrgPublishingPager(OrganizationService, UUID, DatasetType, int) - Constructor for class org.gbif.api.util.iterables.OrgPublishingPager
 
Origin - Enum in org.gbif.api.vocabulary
Enumeration to classify name usages by how they originated.
OtherValidator - Class in org.gbif.api.util.validators.identifierschemes
 
OtherValidator() - Constructor for class org.gbif.api.util.validators.identifierschemes.OtherValidator
 

P

page(Pageable) - Method in class org.gbif.api.model.collections.request.CollectionSearchRequest.Builder
 
page(Pageable) - Method in class org.gbif.api.model.collections.request.InstitutionSearchRequest.Builder
 
Pageable - Interface in org.gbif.api.model.common.paging
Most simple paging interface for both request and responses.
Pageable.OffsetLimitParameters - Annotation Type in org.gbif.api.model.common.paging
The usual (search) limit and offset parameters
PageableBase - Class in org.gbif.api.model.common.paging
Generically is a class that contains attributes used by operations that are aware of pagination.
pagesCrawled(long) - Method in class org.gbif.api.model.crawler.DatasetProcessStatus.Builder
 
pagesFragmentedError(long) - Method in class org.gbif.api.model.crawler.DatasetProcessStatus.Builder
 
pagesFragmentedSuccessful(long) - Method in class org.gbif.api.model.crawler.DatasetProcessStatus.Builder
 
PagingConstants - Class in org.gbif.api.model.common.paging
Paging constants.
PagingRequest - Class in org.gbif.api.model.common.paging
 
PagingRequest() - Constructor for class org.gbif.api.model.common.paging.PagingRequest
 
PagingRequest(Pageable) - Constructor for class org.gbif.api.model.common.paging.PagingRequest
 
PagingRequest(long, int) - Constructor for class org.gbif.api.model.common.paging.PagingRequest
 
PagingResponse<T> - Class in org.gbif.api.model.common.paging
Paging response bean.
PagingResponse() - Constructor for class org.gbif.api.model.common.paging.PagingResponse
Default constructor with default paging values.
PagingResponse(Pageable) - Constructor for class org.gbif.api.model.common.paging.PagingResponse
 
PagingResponse(Pageable, Long) - Constructor for class org.gbif.api.model.common.paging.PagingResponse
 
PagingResponse(long, int) - Constructor for class org.gbif.api.model.common.paging.PagingResponse
 
PagingResponse(Pageable, Long, List<T>) - Constructor for class org.gbif.api.model.common.paging.PagingResponse
 
PagingResponse(long, int, Long) - Constructor for class org.gbif.api.model.common.paging.PagingResponse
 
PagingResponse(long, int, Long, List<T>) - Constructor for class org.gbif.api.model.common.paging.PagingResponse
 
PARAM_LIMIT - Static variable in class org.gbif.api.model.common.paging.PagingConstants
Limit param name.
PARAM_OFFSET - Static variable in class org.gbif.api.model.common.paging.PagingConstants
Offset param name.
ParamName - Annotation Type in org.gbif.api.annotation
Overrides parameter name when a form param name does not match a method param name.
ParentLineage() - Constructor for class org.gbif.api.model.event.Event.ParentLineage
 
parse(String, Rank) - Method in interface org.gbif.api.service.checklistbank.NameParser
Fully parse the supplied name also trying to extract authorships, a conceptual sec reference, remarks or notes on the nomenclatural status.
parse(String) - Method in interface org.gbif.api.service.checklistbank.NameParser
Delegate method to parse a scientific name of unknown rank.
parseContactType(String) - Static method in class org.gbif.api.util.VocabularyUtils
 
parseDate(String) - Method in enum org.gbif.api.util.IsoDateParsingUtils.IsoDateFormat
Try to parse a string with the current date format.
parseDate(String) - Static method in class org.gbif.api.util.IsoDateParsingUtils
Parses a single date value.
parseDateRange(String) - Static method in class org.gbif.api.util.IsoDateParsingUtils
Parses a closed-open range of dates, using the most specific format for each side of the range.
parseDateRange(String) - Static method in class org.gbif.api.util.SearchTypeValidator
Parses a range of ISO dates.
parseDecimalRange(String) - Static method in class org.gbif.api.util.SearchTypeValidator
Parses a decimal range in the format 123.1,456.
parseDistance(String) - Static method in enum org.gbif.api.model.occurrence.geo.DistanceUnit
Parse a DistanceUnit.Distance from a given String
parseDistance(String) - Static method in class org.gbif.api.util.SearchTypeValidator
 
parseDistanceRange(String) - Static method in class org.gbif.api.util.SearchTypeValidator
Parses a distance range in the format 123m,456km.
ParsedName - Class in org.gbif.api.model.checklistbank
A container of a taxon name that is atomised into its relevant, separate parts.
ParsedName() - Constructor for class org.gbif.api.model.checklistbank.ParsedName
 
ParsedName(NameType, String, String, String, String, NamePart, Rank, String, String, String, String, String, String, String, String, String) - Constructor for class org.gbif.api.model.checklistbank.ParsedName
 
ParsedNameService - Interface in org.gbif.api.service.checklistbank
ChecklistBank service dealing with parsed names.
parseEndpointType(String) - Static method in class org.gbif.api.util.VocabularyUtils
 
parseGeoDistance(String) - Static method in class org.gbif.api.model.occurrence.geo.DistanceUnit.GeoDistance
 
parseGeoDistance(String, String, String) - Static method in class org.gbif.api.model.occurrence.geo.DistanceUnit.GeoDistance
 
parseIdentifierType(String) - Static method in class org.gbif.api.util.VocabularyUtils
 
parseIntegerRange(String) - Static method in class org.gbif.api.util.SearchTypeValidator
Parses an integer range in the format 123,456
parseQuietly(String, Rank) - Method in interface org.gbif.api.service.checklistbank.NameParser
Fully parses a name using #parse(String, Rank) but converts names that throw a UnparsableException into ParsedName objects with the scientific name, rank and name type given.
parseQuietly(String) - Method in interface org.gbif.api.service.checklistbank.NameParser
Delegate method to parse a scientific name of unknown rank quietly.
parseTechnicalInstallationType(String) - Static method in class org.gbif.api.util.VocabularyUtils
Deprecated.
parseTemporal(String) - Static method in class org.gbif.api.util.IsoDateParsingUtils
Parses an ISO 8601-format date or date-time.
parseToCanonical(String, Rank) - Method in interface org.gbif.api.service.checklistbank.NameParser
Parses the scientific name without authorship and returns the ParsedName.canonicalName() string
parseToCanonical(String) - Method in interface org.gbif.api.service.checklistbank.NameParser
Delegate method to parse a scientific name of unknown rank and return its canonical form.
PartialDate - Annotation Type in org.gbif.api.annotation
This annotation is used to mark Date parameter that can accept partial dates as input.
ParticipationStatus - Enum in org.gbif.api.vocabulary
Enumeration for all of GBIF's participation statuses.
pendingEndorsements(Pageable) - Method in interface org.gbif.api.service.registry.NodeService
Provides access to the organizations that are awaiting an endorsement approval.
pendingEndorsements(UUID, Pageable) - Method in interface org.gbif.api.service.registry.NodeService
Provides access to the organizations that are awaiting an endorsement approval for the given node.
personalCollection(boolean) - Method in class org.gbif.api.model.collections.request.CollectionSearchRequest.Builder
 
PIPELINE_EXECUTION_BY_CREATED_ASC - Static variable in class org.gbif.api.model.pipelines.PipelineProcess
 
PIPELINE_PROCESS_BY_LATEST_EXEUCTION_ASC - Static variable in class org.gbif.api.model.pipelines.PipelineProcess
Comparator that sorts the pipeline processes by the created date of the latest execution.
PIPELINE_PROCESS_BY_LATEST_STEP_RUNNING_ASC - Static variable in class org.gbif.api.model.pipelines.PipelineProcess
Comparator that sorts pipeline processes by the start date of their latest step in ascending order.
PipelineExecution - Class in org.gbif.api.model.pipelines
Models an execution of a pipeline that can include one or more steps.
PipelineExecution() - Constructor for class org.gbif.api.model.pipelines.PipelineExecution
 
PipelineProcess - Class in org.gbif.api.model.pipelines
Models a pipeline process for a specific dataset and attempt.
PipelineProcess() - Constructor for class org.gbif.api.model.pipelines.PipelineProcess
 
PipelineProcessParameters - Class in org.gbif.api.model.pipelines.ws
Class to send the parameters of a PipelineProcess.
PipelineProcessParameters() - Constructor for class org.gbif.api.model.pipelines.ws.PipelineProcessParameters
 
PipelineProcessParameters(UUID, int) - Constructor for class org.gbif.api.model.pipelines.ws.PipelineProcessParameters
 
PipelinesHistoryService - Interface in org.gbif.api.service.pipelines
 
PipelineStep - Class in org.gbif.api.model.pipelines
Models a step in pipelines.
PipelineStep() - Constructor for class org.gbif.api.model.pipelines.PipelineStep
 
PipelineStep.MetricInfo - Class in org.gbif.api.model.pipelines
Inner class to store metrics.
PipelineStep.Status - Enum in org.gbif.api.model.pipelines
Enum to represent the status of a step.
PipelinesWorkflow - Class in org.gbif.api.model.pipelines
 
PipelinesWorkflow.Graph<T> - Class in org.gbif.api.model.pipelines
 
PipelinesWorkflow.Graph.Edge - Class in org.gbif.api.model.pipelines
 
PLAZI_ORG_KEY - Static variable in class org.gbif.api.model.Constants
The publishing organization key for Plazi.
PlaziTerm - Enum in org.gbif.dwc.terms
Terms used in DwC archives from https://plazi.org
Point - Class in org.gbif.api.model.registry.eml.geospatial
 
Point() - Constructor for class org.gbif.api.model.registry.eml.geospatial.Point
 
Polygon - Class in org.gbif.api.model.registry.eml.geospatial
A simple polygon made out of a list of points to be joined.
Polygon() - Constructor for class org.gbif.api.model.registry.eml.geospatial.Polygon
 
PostPersist - Interface in org.gbif.api.model.registry
A marker intended for validation annotations indicating that the rule should be applied for entites before they have been persisted.
PreconditionUtils - Class in org.gbif.api.util
Analogues of methods from guava's Preconditions
Predicate - Interface in org.gbif.api.model.predicate
 
PredicateDownloadRequest - Class in org.gbif.api.model.occurrence
An occurrence download request whose filters are based on predicates ( see Predicate).
PredicateDownloadRequest() - Constructor for class org.gbif.api.model.occurrence.PredicateDownloadRequest
 
PredicateDownloadRequest(Predicate, String, Collection<String>, Boolean, DownloadFormat, DownloadType, Set<Extension>) - Constructor for class org.gbif.api.model.occurrence.PredicateDownloadRequest
Full constructor.
prefix() - Method in enum org.gbif.dwc.terms.AcefTerm
 
prefix() - Method in enum org.gbif.dwc.terms.AcTerm
 
PREFIX - Static variable in class org.gbif.dwc.terms.BibTexTerm
 
prefix() - Method in class org.gbif.dwc.terms.BibTexTerm
 
prefix() - Method in enum org.gbif.dwc.terms.DcElement
 
prefix() - Method in enum org.gbif.dwc.terms.DcTerm
 
prefix() - Method in enum org.gbif.dwc.terms.DwcaTerm
 
prefix() - Method in enum org.gbif.dwc.terms.DwcTerm
 
prefix() - Method in enum org.gbif.dwc.terms.GadmTerm
 
prefix() - Method in enum org.gbif.dwc.terms.GbifInternalTerm
 
prefix() - Method in enum org.gbif.dwc.terms.GbifTerm
 
prefix() - Method in enum org.gbif.dwc.terms.IucnTerm
 
prefix() - Method in enum org.gbif.dwc.terms.PlaziTerm
 
prefix() - Method in interface org.gbif.dwc.terms.Term
A unique standard prefix representing the namespace.
prefix() - Method in class org.gbif.dwc.terms.UnknownTerm
 
prefix() - Method in enum org.gbif.dwc.terms.XmpRightsTerm
 
prefix() - Method in enum org.gbif.dwc.terms.XmpTerm
 
prefixedName() - Method in interface org.gbif.dwc.terms.Term
The simple term name prefixed by a short unique namespace abbreviation.
prefixedName() - Method in class org.gbif.dwc.terms.UnknownTerm
 
PrePersist - Interface in org.gbif.api.model.registry
A marker intended for validation annotations indicating that the rule should be applied for entites before they have been persisted.
PreservationMethodType - Enum in org.gbif.api.vocabulary
The definition of the available preservation method types (the method used to preserve specimens).
PreservationType - Enum in org.gbif.api.vocabulary.collections
Mechanism of preservation applied to a collection.
preservationTypes(List<PreservationType>) - Method in class org.gbif.api.model.collections.request.CollectionSearchRequest.Builder
 
PRIORITIES - Static variable in class org.gbif.api.util.comparators.EndpointPriorityComparator
 
ProcessingErrorType - Enum in org.gbif.api.vocabulary
Deprecated.
ProcessState - Enum in org.gbif.api.model.crawler
This enum lists the state of an occurrence or checklist crawl.
processStateChecklist(ProcessState) - Method in class org.gbif.api.model.crawler.DatasetProcessStatus.Builder
 
processStateOccurrence(ProcessState) - Method in class org.gbif.api.model.crawler.DatasetProcessStatus.Builder
 
processStateSample(ProcessState) - Method in class org.gbif.api.model.crawler.DatasetProcessStatus.Builder
 
Project - Class in org.gbif.api.model.registry.eml
A dataset can be part of a project.
Project() - Constructor for class org.gbif.api.model.registry.eml.Project
 
Project(String, String, List<Contact>, String, String, String, String) - Constructor for class org.gbif.api.model.registry.eml.Project
 
PROTOCOL - Static variable in class org.gbif.api.model.metrics.cube.OccurrenceCube
 
publishedDatasets(UUID, Pageable) - Method in interface org.gbif.api.service.registry.OrganizationService
Provides paging service to list datasets published by a specific organization.
publishedDatasets(UUID, DatasetType, OrganizationService) - Static method in class org.gbif.api.util.iterables.Iterables
 
PUBLISHING_COUNTRY - Static variable in class org.gbif.api.model.metrics.cube.OccurrenceCube
 
publishingCountriesForCountry(Country) - Method in interface org.gbif.api.service.occurrence.OccurrenceCountryIndexService
Lists all publishing countries of occurrences falling within a given country.
publishingOrganizations(UUID, Pageable) - Method in interface org.gbif.api.service.registry.NetworkService
Pages through publishing organizations of a network.

Q

Q_PARAM - Static variable in class org.gbif.api.model.registry.search.RequestSearchParams
 
qualifiedName() - Method in interface org.gbif.dwc.terms.Term
The full qualified term uri including the namespace.
qualifiedName() - Method in class org.gbif.dwc.terms.UnknownTerm
 
query(String) - Method in class org.gbif.api.model.collections.request.CollectionSearchRequest.Builder
 
query(String) - Method in class org.gbif.api.model.collections.request.InstitutionSearchRequest.Builder
 
QUERY_PARAM - Static variable in class org.gbif.api.model.common.search.SearchConstants
The http parameter name for the search query.
QUERY_WILDCARD - Static variable in class org.gbif.api.model.common.search.SearchConstants
Wildcard character to be used in 'search all' operations and range queries; e.g.: [* TO 100].
QueryBuildingException - Exception in org.gbif.api.exception
 
QueryBuildingException() - Constructor for exception org.gbif.api.exception.QueryBuildingException
 
QueryBuildingException(String) - Constructor for exception org.gbif.api.exception.QueryBuildingException
 
QueryBuildingException(String, Throwable) - Constructor for exception org.gbif.api.exception.QueryBuildingException
 
QueryBuildingException(Throwable) - Constructor for exception org.gbif.api.exception.QueryBuildingException
 
QueryBuildingException(String, Throwable, boolean, boolean) - Constructor for exception org.gbif.api.exception.QueryBuildingException
 
QueryVisitor - Interface in org.gbif.api.query
 

R

Range<T extends Comparable<? super T>> - Class in org.gbif.api.util
Simplified version of guava's Range.
RangePredicate<S extends SearchParameter> - Class in org.gbif.api.model.predicate
This predicate checks if its key is within the range value.
RangePredicate(S, RangeValue) - Constructor for class org.gbif.api.model.predicate.RangePredicate
 
RangeValue - Class in org.gbif.api.util
A range used for predicates allowing including or excluding the end values.
RangeValue(String, String, String, String) - Constructor for class org.gbif.api.util.RangeValue
 
Rank - Enum in org.gbif.api.vocabulary
An ordered taxonomic rank enumeration with the most frequently used values.
RankedName - Class in org.gbif.api.v2
 
RankedName() - Constructor for class org.gbif.api.v2.RankedName
 
RankedName(int, String, Rank) - Constructor for class org.gbif.api.v2.RankedName
 
RankJsonDeserializer() - Constructor for class org.gbif.api.jackson.RankSerde.RankJsonDeserializer
 
RankJsonSerializer() - Constructor for class org.gbif.api.jackson.RankSerde.RankJsonSerializer
 
RankSerde - Class in org.gbif.api.jackson
Jackson JsonSerializer and Jackson JsonDeserializer classes for Rank that uses the common rank markers instead of enum names.
RankSerde() - Constructor for class org.gbif.api.jackson.RankSerde
 
RankSerde.RankJsonDeserializer - Class in org.gbif.api.jackson
Jackson JsonDeserializer for Rank.
RankSerde.RankJsonSerializer - Class in org.gbif.api.jackson
Jackson JsonSerializer for Rank.
rawOccurrencesPersistedError(long) - Method in class org.gbif.api.model.crawler.DatasetProcessStatus.Builder
 
rawOccurrencesPersistedNew(long) - Method in class org.gbif.api.model.crawler.DatasetProcessStatus.Builder
 
rawOccurrencesPersistedUnchanged(long) - Method in class org.gbif.api.model.crawler.DatasetProcessStatus.Builder
 
rawOccurrencesPersistedUpdated(long) - Method in class org.gbif.api.model.crawler.DatasetProcessStatus.Builder
 
ReadBuilder - Class in org.gbif.api.model.metrics.cube
Provides building of addresses for reading the cube.
ReadBuilder() - Constructor for class org.gbif.api.model.metrics.cube.ReadBuilder
 
REASON_REQUIRED_MESSAGE - Static variable in interface org.gbif.api.service.pipelines.PipelinesHistoryService
 
RecordError - Class in org.gbif.api.model.metrics
Deprecated.
RecordError() - Constructor for class org.gbif.api.model.metrics.RecordError
Deprecated.
 
RecordError(RecordError.Builder) - Constructor for class org.gbif.api.model.metrics.RecordError
Deprecated.
 
RecordError.Builder - Class in org.gbif.api.model.metrics
Deprecated.
 
recordId(long) - Method in class org.gbif.api.model.metrics.RecordError.Builder
Deprecated.
 
Reference - Class in org.gbif.api.model.checklistbank
Reference Model Object represents a literature reference stating a bibliography for a taxon.
Reference() - Constructor for class org.gbif.api.model.checklistbank.Reference
 
ReferenceService - Interface in org.gbif.api.service.checklistbank
Service interface for Reference Interface methods.
registerQualifiedTermEnum(Class<T>) - Method in class org.gbif.dwc.terms.TermFactory
Registers all terms from a new term enumeration, but only adds their qualified and prefixed names.
registerTerm(Term) - Method in class org.gbif.dwc.terms.TermFactory
 
registerTerm(UnknownTerm) - Method in class org.gbif.dwc.terms.TermFactory
 
registerTermEnum(Class<T>, String...) - Method in class org.gbif.dwc.terms.TermFactory
Registers all terms from a term enumeration.
RelationType - Enum in org.gbif.api.vocabulary
 
removeConstituent(UUID, UUID) - Method in interface org.gbif.api.service.registry.NetworkService
Removes an existing constituent dataset from a network.
removeContactPerson(UUID, int) - Method in interface org.gbif.api.service.collections.ContactService
Removes a Contact contact from an entity.
replace(UUID, UUID) - Method in interface org.gbif.api.service.collections.CollectionEntityService
Replaces a entity with another.
replaceContactPersons(UUID, List<Contact>) - Method in interface org.gbif.api.service.collections.ContactService
Removes all the contacts from an entity.
replacedBy(UUID) - Method in class org.gbif.api.model.collections.request.CollectionSearchRequest.Builder
 
replacedBy(UUID) - Method in class org.gbif.api.model.collections.request.InstitutionSearchRequest.Builder
 
Request<T> - Class in org.gbif.api.model.common.messaging
Class that represents a generic invocation of operation.
Request() - Constructor for class org.gbif.api.model.common.messaging.Request
 
Request.Builder<T> - Class in org.gbif.api.model.common.messaging
Builder class for Request instances.
Request.OperationType - Enum in org.gbif.api.model.common.messaging
CRUD operation types.
RequestSearchParams - Class in org.gbif.api.model.registry.search
Base class for registry requests to list the entities.
RequestSearchParams() - Constructor for class org.gbif.api.model.registry.search.RequestSearchParams
 
ResearcherIdValidator - Class in org.gbif.api.util.validators.identifierschemes
 
ResearcherIdValidator() - Constructor for class org.gbif.api.util.validators.identifierschemes.ResearcherIdValidator
 
Response<T> - Class in org.gbif.api.model.common.messaging
 
Response() - Constructor for class org.gbif.api.model.common.messaging.Response
 
Response(Response<T>) - Constructor for class org.gbif.api.model.common.messaging.Response
 
Response(Response.Status) - Constructor for class org.gbif.api.model.common.messaging.Response
Constructor using status only.
Response(Response.Status, String) - Constructor for class org.gbif.api.model.common.messaging.Response
 
Response(Response.Status, T, String) - Constructor for class org.gbif.api.model.common.messaging.Response
 
Response.Builder<T> - Class in org.gbif.api.model.common.messaging
Builder for Response objects.
Response.Status - Enum in org.gbif.api.model.common.messaging
 
Response.StatusCode - Enum in org.gbif.api.model.common.messaging
 
ResponseChain<T,R> - Class in org.gbif.api.model.common.messaging
Response that can contain a list of related responses.
ResponseChain() - Constructor for class org.gbif.api.model.common.messaging.ResponseChain
 
ResponseChain(Response.Status) - Constructor for class org.gbif.api.model.common.messaging.ResponseChain
 
ResponseChain(Response.Status, String) - Constructor for class org.gbif.api.model.common.messaging.ResponseChain
 
ResponseChain(Response.Status, T, String) - Constructor for class org.gbif.api.model.common.messaging.ResponseChain
 
revokeEndorsement(UUID) - Method in interface org.gbif.api.service.registry.OrganizationService
Revoke the endorsement of the Organization.
Rollup - Class in org.gbif.api.model.metrics.cube
A rollup defines an addressable count that is maintained for a set of dimensions.
Rollup() - Constructor for class org.gbif.api.model.metrics.cube.Rollup
Prefer use of the constructor taking the parameters over this method.
Rollup(Dimension<?>...) - Constructor for class org.gbif.api.model.metrics.cube.Rollup
 
Rollup(Set<Dimension<?>>) - Constructor for class org.gbif.api.model.metrics.cube.Rollup
 
ROLLUPS - Static variable in class org.gbif.api.model.metrics.cube.OccurrenceCube
 
rootException(Throwable) - Method in class org.gbif.api.model.common.messaging.Response.Builder
 
runAll(String, String, boolean, boolean, RunAllParams, Set<String>) - Method in interface org.gbif.api.service.pipelines.PipelinesHistoryService
Runs the last attempt for all datasets.
RunAllParams - Class in org.gbif.api.model.pipelines.ws
Encapsulates the params to pass in the body for the runAll method.
RunAllParams() - Constructor for class org.gbif.api.model.pipelines.ws.RunAllParams
 
runPipelineAttempt(UUID, String, String, boolean, boolean, Set<String>) - Method in interface org.gbif.api.service.pipelines.PipelinesHistoryService
Restart last failed pipelines step for a dataset.
runPipelineAttempt(UUID, int, String, String, boolean, Set<String>) - Method in interface org.gbif.api.service.pipelines.PipelinesHistoryService
Re-run a pipeline step.
RunPipelineResponse - Class in org.gbif.api.model.pipelines
Encapsulates the possible response of the request of re-execute a pipeline of dataset and attempt.
RunPipelineResponse() - Constructor for class org.gbif.api.model.pipelines.RunPipelineResponse
 
RunPipelineResponse(RunPipelineResponse.ResponseStatus, Set<StepType>, Set<StepType>, String) - Constructor for class org.gbif.api.model.pipelines.RunPipelineResponse
 
RunPipelineResponse.Builder - Class in org.gbif.api.model.pipelines
Builder for RunPipelineResponse.
RunPipelineResponse.ResponseStatus - Enum in org.gbif.api.model.pipelines
Possible response statuses.

S

SAMPLING_EVENT_DATASET_SUBTYPES - Static variable in enum org.gbif.api.vocabulary.DatasetSubtype
A set of all DatasetSubtype that belong to DatasetType SAMPLING_EVENT.
SamplingDescription - Class in org.gbif.api.model.registry.eml
 
SamplingDescription() - Constructor for class org.gbif.api.model.registry.eml.SamplingDescription
 
SamplingDescription(String, String, String, List<String>) - Constructor for class org.gbif.api.model.registry.eml.SamplingDescription
 
scientificName() - Method in enum org.gbif.api.vocabulary.Kingdom
 
search(R) - Method in interface org.gbif.api.service.common.SearchService
Issues a SearchRequest and retrieves a response resulting of the search operation.
search(OccurrencePredicateSearchRequest) - Method in interface org.gbif.api.service.occurrence.OccurrenceSearchService
Occurrence search implementation that uses a predicate instead of request parameters.
search(String, Pageable) - Method in interface org.gbif.api.service.registry.NetworkEntityService
Deprecated.
SearchConstants - Class in org.gbif.api.model.common.search
Contains common search constants.
SearchParameter - Interface in org.gbif.api.model.common.search
Interface to be implemented by all search parameter enumerations.
SearchRequest - Class in org.gbif.api.model.collections.request
 
SearchRequest() - Constructor for class org.gbif.api.model.collections.request.SearchRequest
 
SearchRequest<P extends SearchParameter> - Class in org.gbif.api.model.common.search
Generic request class for search operations.
SearchRequest() - Constructor for class org.gbif.api.model.common.search.SearchRequest
Constructor with default paging offset & limit.
SearchRequest(String) - Constructor for class org.gbif.api.model.common.search.SearchRequest
Simple query constructor with default paging offset & limit.
SearchRequest(Pageable) - Constructor for class org.gbif.api.model.common.search.SearchRequest
Minimal paging constructor.
SearchRequest(long, int) - Constructor for class org.gbif.api.model.common.search.SearchRequest
Minimal paging constructor.
SearchRequest.QueryField - Interface in org.gbif.api.model.common.search
 
SearchResponse<T,P extends SearchParameter> - Class in org.gbif.api.model.common.search
Generic response of a search operation.
SearchResponse() - Constructor for class org.gbif.api.model.common.search.SearchResponse
Default constructor.
SearchResponse(Pageable) - Constructor for class org.gbif.api.model.common.search.SearchResponse
Minimal paging constructor.
SearchResponse(PagingResponse<T>) - Constructor for class org.gbif.api.model.common.search.SearchResponse
Minimal paging constructor.
SearchResponse(long, int) - Constructor for class org.gbif.api.model.common.search.SearchResponse
Minimal paging constructor.
SearchResponse(long, int, Long, List<T>, List<Facet<P>>) - Constructor for class org.gbif.api.model.common.search.SearchResponse
Full constructor.
SearchResult - Class in org.gbif.api.model.pipelines.ws
Models a flat response of a pipeline process search.
SearchResult() - Constructor for class org.gbif.api.model.pipelines.ws.SearchResult
 
SearchService<T,P extends Enum<?> & SearchParameter,R extends SearchRequest<P>> - Interface in org.gbif.api.service.common
Parameterized generic search interface that supports pagination.
SearchTypeValidator - Class in org.gbif.api.util
Utility class to do basic validation of all search enum based values.
sendAbsentIndentifiersEmail(UUID, int, String) - Method in interface org.gbif.api.service.pipelines.PipelinesHistoryService
Deprecated.
serialize(BasisOfRecord, JsonGenerator, SerializerProvider) - Method in class org.gbif.api.jackson.BasisOfRecordSerde.BasisOfRecordJsonSerializer
 
serialize(Date, JsonGenerator, SerializerProvider) - Method in class org.gbif.api.jackson.DateSerde.NoTimezoneDateJsonSerializer
 
serialize(Extension, JsonGenerator, SerializerProvider) - Method in class org.gbif.api.jackson.ExtensionKeySerializer
 
serialize(Extension, JsonGenerator, SerializerProvider) - Method in class org.gbif.api.jackson.ExtensionSerializer
 
serialize(IsoDateInterval, JsonGenerator, SerializerProvider) - Method in class org.gbif.api.jackson.IsoDateIntervalSerde.IsoDateIntervalSerializer
 
serialize(License, JsonGenerator, SerializerProvider) - Method in class org.gbif.api.jackson.LicenseSerde.LicenseJsonSerializer
 
serialize(LocalDateTime, JsonGenerator, SerializerProvider) - Method in class org.gbif.api.jackson.LocalDateTimeSerDe.LocalDateTimeSerializer
 
serialize(Map.Entry<Object, Object>, JsonGenerator, SerializerProvider) - Method in class org.gbif.api.jackson.MapEntrySerde.MapEntryJsonSerializer
Deprecated.
 
serialize(Rank, JsonGenerator, SerializerProvider) - Method in class org.gbif.api.jackson.RankSerde.RankJsonSerializer
 
serialize(List<Map<Term, String>>, JsonGenerator, SerializerProvider) - Method in class org.gbif.api.jackson.TermMapListSerializer
Deprecated.
 
serialize(DOI, JsonGenerator, SerializerProvider) - Method in class org.gbif.api.model.common.DOI.DoiSerializer
 
serialize(Country, JsonGenerator, SerializerProvider) - Method in class org.gbif.api.vocabulary.Country.IsoSerializer
 
serialize(Country, JsonGenerator, SerializerProvider) - Method in class org.gbif.api.vocabulary.Country.TitleSerializer
 
serialize(Language, JsonGenerator, SerializerProvider) - Method in class org.gbif.api.vocabulary.Language.IsoKeySerializer
 
serialize(Language, JsonGenerator, SerializerProvider) - Method in class org.gbif.api.vocabulary.Language.IsoSerializer
 
serialize(Term, JsonGenerator, SerializerProvider) - Method in class org.gbif.dwc.terms.jackson.TermKeySerializer
 
serialize(Term, JsonGenerator, SerializerProvider) - Method in class org.gbif.dwc.terms.jackson.TermSerializer
 
ServiceUnavailableException - Exception in org.gbif.api.exception
An unchecked exception that indicates that the service is not available.
ServiceUnavailableException(String, Throwable) - Constructor for exception org.gbif.api.exception.ServiceUnavailableException
Constructor for ServiceUnavailableException.
ServiceUnavailableException(String) - Constructor for exception org.gbif.api.exception.ServiceUnavailableException
 
setAbbreviatedName(String) - Method in class org.gbif.api.model.registry.CitationContact
 
setAbbreviation(String) - Method in class org.gbif.api.model.registry.Dataset
Persisted in the database table.
setAbbreviation(String) - Method in class org.gbif.api.model.registry.Node
 
setAbbreviation(String) - Method in class org.gbif.api.model.registry.Organization
 
setAbstract(String) - Method in class org.gbif.api.model.literature.search.LiteratureSearchResult
 
setAbstract(String) - Method in class org.gbif.api.model.registry.eml.Project
 
setAccepted(String) - Method in class org.gbif.api.model.checklistbank.NameUsage
Sets the scientific name of the basionym, i.e.
setAccepted(String) - Method in class org.gbif.api.model.checklistbank.search.NameUsageSearchResult
 
setAcceptedKey(Integer) - Method in class org.gbif.api.model.checklistbank.NameUsage
Sets the usage key for the accepted name.
setAcceptedKey(Integer) - Method in class org.gbif.api.model.checklistbank.search.NameUsageSearchResult
 
setAcceptedScientificName(String) - Method in class org.gbif.api.model.occurrence.Occurrence
 
setAcceptedTaxonKey(Integer) - Method in class org.gbif.api.model.occurrence.Occurrence
 
setAcceptedUsage(RankedName) - Method in class org.gbif.api.v2.NameUsageMatch2
 
setAcceptedUsageKey(Integer) - Method in class org.gbif.api.model.checklistbank.NameUsageMatch
 
setAccessionStatus(AccessionStatus) - Method in class org.gbif.api.model.collections.Collection
 
setAccessionStatus(AccessionStatus) - Method in class org.gbif.api.model.collections.request.CollectionSearchRequest
 
setAccordingTo(String) - Method in class org.gbif.api.model.checklistbank.NameUsage
 
setAccordingTo(String) - Method in class org.gbif.api.model.checklistbank.search.NameUsageSearchResult
 
setAccordingTo(String) - Method in class org.gbif.api.model.occurrence.OccurrenceRelation
 
setAccuracy(String) - Method in class org.gbif.api.model.occurrence.MeasurementOrFact
 
setActive(boolean) - Method in class org.gbif.api.model.collections.Collection
 
setActive(boolean) - Method in interface org.gbif.api.model.collections.CollectionEntity
 
setActive(boolean) - Method in class org.gbif.api.model.collections.duplicates.Duplicate
 
setActive(boolean) - Method in class org.gbif.api.model.collections.Institution
 
setActive(boolean) - Method in class org.gbif.api.model.collections.lookup.BaseEntityMatched
 
setActive(Boolean) - Method in class org.gbif.api.model.collections.request.SearchRequest
 
setAdditionalInfo(String) - Method in class org.gbif.api.model.registry.Dataset
 
setAdditionalNames(List<String>) - Method in class org.gbif.api.model.collections.Institution
 
setAddress(String) - Method in class org.gbif.api.model.collections.Address
 
setAddress(Address) - Method in class org.gbif.api.model.collections.Collection
 
setAddress(List<String>) - Method in class org.gbif.api.model.collections.Contact
 
setAddress(Address) - Method in interface org.gbif.api.model.collections.Contactable
 
setAddress(Address) - Method in class org.gbif.api.model.collections.Institution
 
setAddress(List<String>) - Method in interface org.gbif.api.model.registry.Address
 
setAddress(List<String>) - Method in class org.gbif.api.model.registry.Contact
 
setAddress(List<String>) - Method in class org.gbif.api.model.registry.Network
 
setAddress(List<String>) - Method in class org.gbif.api.model.registry.Node
 
setAddress(List<String>) - Method in class org.gbif.api.model.registry.Organization
 
setAgeInDays(Integer) - Method in class org.gbif.api.model.checklistbank.SpeciesProfile
 
setAlias(String) - Method in class org.gbif.api.model.registry.Dataset
Persisted in the database table.
setAllSteps(Set<PipelineStep>) - Method in class org.gbif.api.model.pipelines.WorkflowStep
 
setAlternativeCode(String) - Method in class org.gbif.api.model.collections.request.SearchRequest
 
setAlternativeCodes(List<AlternativeCode>) - Method in class org.gbif.api.model.collections.Collection
 
setAlternativeCodes(List<AlternativeCode>) - Method in interface org.gbif.api.model.collections.CollectionEntity
 
setAlternativeCodes(List<AlternativeCode>) - Method in class org.gbif.api.model.collections.Institution
 
setAlternativeMatches(AlternativeMatches) - Method in class org.gbif.api.model.collections.lookup.LookupResult
 
setAlternatives(List<NameUsageMatch>) - Method in class org.gbif.api.model.checklistbank.NameUsageMatch
 
setAlternatives(List<String>) - Method in class org.gbif.api.model.common.search.SpellCheckResponse.Suggestion
Sets the alternatives for a token.
setAlternatives(List<NameUsageMatch2>) - Method in class org.gbif.api.v2.NameUsageMatch2.Diagnostics
 
setApiUrl(URI) - Method in class org.gbif.api.model.collections.Collection
 
setApiUrl(URI) - Method in class org.gbif.api.model.collections.Institution
 
setAppendixCites(CitesAppendix) - Method in class org.gbif.api.model.checklistbank.Distribution
 
setApplied(Date) - Method in class org.gbif.api.model.collections.suggestions.BaseChangeSuggestion
 
setApplied(Date) - Method in interface org.gbif.api.model.collections.suggestions.ChangeSuggestion
 
setAppliedBy(String) - Method in class org.gbif.api.model.collections.suggestions.BaseChangeSuggestion
 
setAppliedBy(String) - Method in interface org.gbif.api.model.collections.suggestions.ChangeSuggestion
 
setArea(String) - Method in class org.gbif.api.model.checklistbank.VernacularName
 
setAssociatedSequences(String) - Method in class org.gbif.api.model.occurrence.Occurrence
 
setAttempt(int) - Method in class org.gbif.api.model.pipelines.IngestionProcess
 
setAttempt(int) - Method in class org.gbif.api.model.pipelines.PipelineProcess
 
setAttempt(int) - Method in class org.gbif.api.model.pipelines.ws.PipelineProcessParameters
 
setAttempt(int) - Method in class org.gbif.api.model.pipelines.ws.SearchResult
 
setAudience(String) - Method in class org.gbif.api.model.common.MediaObject
 
setAuthor(String) - Method in class org.gbif.api.model.checklistbank.Reference
Deprecated.
setAuthor(String) - Method in class org.gbif.api.model.collections.suggestions.Change
 
setAuthorship(String) - Method in class org.gbif.api.model.checklistbank.NameUsage
 
setAuthorship(String) - Method in class org.gbif.api.model.checklistbank.ParsedName
 
setAuthorship(String) - Method in class org.gbif.api.model.checklistbank.search.NameUsageSearchResult
 
setBasionym(String) - Method in class org.gbif.api.model.checklistbank.NameUsage
sets the basionym name.
setBasionym(String) - Method in class org.gbif.api.model.checklistbank.search.NameUsageSearchResult
 
setBasionymKey(Integer) - Method in class org.gbif.api.model.checklistbank.NameUsage
 
setBasionymKey(Integer) - Method in class org.gbif.api.model.checklistbank.search.NameUsageSearchResult
 
setBasisOfRecord(BasisOfRecord) - Method in class org.gbif.api.model.occurrence.Occurrence
 
setBed(String) - Method in class org.gbif.api.model.occurrence.Occurrence
 
setBibliographicCitations(List<Citation>) - Method in class org.gbif.api.model.registry.Dataset
 
setBoundingBox(BoundingBox) - Method in class org.gbif.api.model.registry.eml.geospatial.GeospatialCoverage
 
setBracketAuthorship(String) - Method in class org.gbif.api.model.checklistbank.ParsedName
 
setBracketYear(String) - Method in class org.gbif.api.model.checklistbank.ParsedName
 
setCanonicalName(String) - Method in class org.gbif.api.model.checklistbank.NameUsage
 
setCanonicalName(String) - Method in class org.gbif.api.model.checklistbank.NameUsageMatch
 
setCanonicalName(String) - Method in class org.gbif.api.model.checklistbank.search.NameUsageSearchResult
 
setCanonicalName(String) - Method in class org.gbif.api.model.checklistbank.search.NameUsageSuggestResult
 
setCatalogNumber(String) - Method in class org.gbif.api.model.checklistbank.TypeSpecimen
Deprecated.
setCatalogNumber(String) - Method in class org.gbif.api.model.metrics.RecordError
Deprecated.
 
setCatalogUrl(URI) - Method in class org.gbif.api.model.collections.Collection
 
setCatalogUrl(URI) - Method in class org.gbif.api.model.collections.Institution
 
setChanges(List<Change>) - Method in class org.gbif.api.model.collections.suggestions.BaseChangeSuggestion
 
setChanges(List<Change>) - Method in interface org.gbif.api.model.collections.suggestions.ChangeSuggestion
 
setCharset(String) - Method in class org.gbif.api.model.registry.eml.DataDescription
 
setCitation(String) - Method in class org.gbif.api.model.checklistbank.Reference
 
setCitation(String) - Method in class org.gbif.api.model.checklistbank.TypeSpecimen
Deprecated.
setCitation(Citation) - Method in class org.gbif.api.model.registry.Dataset
Persisted in the database table.
setCitationProvidedBySource(boolean) - Method in class org.gbif.api.model.registry.Citation
 
setCitesPermitNumber(String) - Method in class org.gbif.api.model.collections.Institution
 
setCity(String) - Method in class org.gbif.api.model.collections.Address
 
setCity(String) - Method in class org.gbif.api.model.collections.Contact
 
setCity(String) - Method in class org.gbif.api.model.collections.request.SearchRequest
 
setCity(String) - Method in interface org.gbif.api.model.registry.Address
 
setCity(String) - Method in class org.gbif.api.model.registry.Contact
 
setCity(String) - Method in class org.gbif.api.model.registry.Network
 
setCity(String) - Method in class org.gbif.api.model.registry.Node
 
setCity(String) - Method in class org.gbif.api.model.registry.Organization
 
setClassification(List<RankedName>) - Method in class org.gbif.api.v2.NameUsageMatch2
 
setClassKey(Integer) - Method in class org.gbif.api.model.checklistbank.NameUsage
 
setClassKey(Integer) - Method in class org.gbif.api.model.checklistbank.NameUsageMatch
 
setClassKey(Integer) - Method in class org.gbif.api.model.checklistbank.search.NameUsageSearchResult
 
setClassKey(Integer) - Method in class org.gbif.api.model.checklistbank.search.NameUsageSuggestResult
 
setClassKey(Integer) - Method in interface org.gbif.api.model.common.LinneanClassificationKeys
 
setClassKey(Integer) - Method in class org.gbif.api.model.occurrence.Occurrence
 
setClazz(String) - Method in class org.gbif.api.model.checklistbank.NameUsage
 
setClazz(String) - Method in class org.gbif.api.model.checklistbank.NameUsageMatch
 
setClazz(String) - Method in class org.gbif.api.model.checklistbank.search.NameUsageSearchResult
 
setClazz(String) - Method in class org.gbif.api.model.checklistbank.search.NameUsageSuggestResult
 
setClazz(String) - Method in interface org.gbif.api.model.common.LinneanClassification
 
setClazz(String) - Method in class org.gbif.api.model.occurrence.Occurrence
 
setCode(UUID) - Method in class org.gbif.api.model.ChallengeCode
 
setCode(String) - Method in class org.gbif.api.model.collections.AlternativeCode
 
setCode(String) - Method in class org.gbif.api.model.collections.Collection
 
setCode(String) - Method in interface org.gbif.api.model.collections.CollectionEntity
 
setCode(String) - Method in class org.gbif.api.model.collections.duplicates.Duplicate
 
setCode(String) - Method in class org.gbif.api.model.collections.Institution
 
setCode(String) - Method in class org.gbif.api.model.collections.lookup.BaseEntityMatched
 
setCode(String) - Method in class org.gbif.api.model.collections.OccurrenceMapping
 
setCode(String) - Method in class org.gbif.api.model.collections.request.SearchRequest
 
setCode(String) - Method in class org.gbif.api.model.collections.search.CollectionsSearchResponse
 
setCode(Integer) - Method in enum org.gbif.api.model.common.messaging.Response.StatusCode
 
setCode(String) - Method in class org.gbif.api.model.registry.search.collections.KeyCodeNameResult
 
setColCoveragePct(int) - Method in class org.gbif.api.model.checklistbank.DatasetMetrics
 
setCollection(Collection) - Method in class org.gbif.api.model.collections.view.CollectionView
 
setCollectionCode(String) - Method in class org.gbif.api.model.checklistbank.TypeSpecimen
Deprecated.
setCollectionCode(String) - Method in class org.gbif.api.model.collections.CollectionImportParams
 
setCollectionCode(String) - Method in class org.gbif.api.model.collections.lookup.LookupParams
 
setCollectionCode(String) - Method in class org.gbif.api.model.metrics.RecordError
Deprecated.
 
setCollectionId(String) - Method in class org.gbif.api.model.collections.lookup.LookupParams
 
setCollectionKey(String) - Method in class org.gbif.api.model.occurrence.Occurrence
 
setCollectionMatch(Match<CollectionMatched>) - Method in class org.gbif.api.model.collections.lookup.LookupResult
 
setCollectionMatches(List<Match<CollectionMatched>>) - Method in class org.gbif.api.model.collections.lookup.AlternativeMatches
 
setCollections(List<Collection>) - Method in class org.gbif.api.model.registry.Dataset
 
setCollectionSummary(Map<String, Integer>) - Method in class org.gbif.api.model.collections.Collection
 
setColMatchingCount(int) - Method in class org.gbif.api.model.checklistbank.DatasetMetrics
 
setCombinations(List<NameUsage>) - Method in class org.gbif.api.model.checklistbank.NameUsageContainer
 
setComments(List<Comment>) - Method in class org.gbif.api.model.collections.Collection
 
setComments(List<Comment>) - Method in class org.gbif.api.model.collections.Institution
 
setComments(List<String>) - Method in class org.gbif.api.model.collections.suggestions.BaseChangeSuggestion
 
setComments(List<String>) - Method in interface org.gbif.api.model.collections.suggestions.ChangeSuggestion
 
setComments(List<Comment>) - Method in interface org.gbif.api.model.registry.Commentable
 
setComments(List<Comment>) - Method in class org.gbif.api.model.registry.Dataset
 
setComments(List<Comment>) - Method in class org.gbif.api.model.registry.Installation
 
setComments(List<Comment>) - Method in class org.gbif.api.model.registry.Network
 
setComments(List<Comment>) - Method in class org.gbif.api.model.registry.Node
 
setComments(List<Comment>) - Method in class org.gbif.api.model.registry.Organization
 
setCommonName(String) - Method in class org.gbif.api.model.registry.eml.TaxonomicCoverage
 
setConfidence(Integer) - Method in class org.gbif.api.model.checklistbank.NameUsageMatch
 
setConfidence(Integer) - Method in class org.gbif.api.v2.NameUsageMatch2.Diagnostics
 
setConfirmationKey(UUID) - Method in class org.gbif.api.model.registry.ConfirmationKeyParameter
 
setConstituentKey(UUID) - Method in class org.gbif.api.model.checklistbank.NameUsage
 
setConstituentKey(UUID) - Method in class org.gbif.api.model.checklistbank.search.NameUsageSearchResult
 
setContact(UUID) - Method in class org.gbif.api.model.collections.request.SearchRequest
 
setContactPersons(List<Contact>) - Method in class org.gbif.api.model.collections.Collection
 
setContactPersons(List<Contact>) - Method in interface org.gbif.api.model.collections.Contactable
 
setContactPersons(List<Contact>) - Method in class org.gbif.api.model.collections.Institution
 
setContacts(List<Contact>) - Method in interface org.gbif.api.model.registry.Contactable
 
setContacts(List<Contact>) - Method in class org.gbif.api.model.registry.Dataset
 
setContacts(List<Contact>) - Method in class org.gbif.api.model.registry.eml.Project
 
setContacts(List<Contact>) - Method in class org.gbif.api.model.registry.Installation
 
setContacts(List<Contact>) - Method in class org.gbif.api.model.registry.Network
 
setContacts(List<Contact>) - Method in class org.gbif.api.model.registry.Node
 
setContacts(List<Contact>) - Method in class org.gbif.api.model.registry.Organization
 
setContactsCitation(List<CitationContact>) - Method in class org.gbif.api.model.registry.Dataset
 
setContent(T) - Method in class org.gbif.api.model.common.messaging.Response
 
setContent(String) - Method in class org.gbif.api.model.registry.Comment
 
setContent(String) - Method in class org.gbif.api.model.registry.Metadata
 
setContentTypes(List<CollectionContentType>) - Method in class org.gbif.api.model.collections.Collection
 
setContentTypes(List<CollectionContentType>) - Method in class org.gbif.api.model.collections.request.CollectionSearchRequest
 
setContext(Map<String, String>) - Method in class org.gbif.api.model.common.messaging.Request
 
setContinent(Continent) - Method in class org.gbif.api.model.occurrence.Occurrence
 
setContinent(Continent) - Method in class org.gbif.api.model.registry.Node
 
setContinent(Set<Continent>) - Method in class org.gbif.api.model.registry.search.DatasetSearchResult
 
setContributor(String) - Method in class org.gbif.api.model.checklistbank.Description
 
setContributor(String) - Method in class org.gbif.api.model.common.MediaObject
 
setConvertedToCollection(UUID) - Method in class org.gbif.api.model.collections.Institution
 
setCoordinateAccuracy(Double) - Method in class org.gbif.api.model.occurrence.Occurrence
 
setCoordinatePrecision(Double) - Method in class org.gbif.api.model.occurrence.Occurrence
 
setCoordinateUncertaintyInMeters(Double) - Method in class org.gbif.api.model.occurrence.Occurrence
 
setCoreField(Term, String) - Method in class org.gbif.api.model.checklistbank.VerbatimNameUsage
For setting a specific field without having to replace the entire fields Map.
setCorrectlySpelled(boolean) - Method in class org.gbif.api.model.common.search.SpellCheckResponse
Sets the misspelling flag.
setCount(Long) - Method in class org.gbif.api.model.common.paging.PagingResponse
Sets the total count for all results, not only the ones in this response page.
setCount(Long) - Method in class org.gbif.api.model.common.search.Facet.Count
Sets the count of occurrences for this category.
setCount(int) - Method in class org.gbif.api.model.registry.eml.curatorial.CuratorialUnitComposite
 
setCount(int) - Method in class org.gbif.api.model.registry.eml.curatorial.CuratorialUnitCount
 
setCountByConstituent(Map<UUID, Integer>) - Method in class org.gbif.api.model.checklistbank.DatasetMetrics
 
setCountByIssue(Map<NameUsageIssue, Integer>) - Method in class org.gbif.api.model.checklistbank.DatasetMetrics
 
setCountByKingdom(Map<Kingdom, Integer>) - Method in class org.gbif.api.model.checklistbank.DatasetMetrics
 
setCountByOrigin(Map<Origin, Integer>) - Method in class org.gbif.api.model.checklistbank.DatasetMetrics
 
setCountByRank(Map<Rank, Integer>) - Method in class org.gbif.api.model.checklistbank.DatasetMetrics
 
setCountExtRecordsByExtension(Map<Extension, Integer>) - Method in class org.gbif.api.model.checklistbank.DatasetMetrics
 
setCountNamesByLanguage(Map<Language, Integer>) - Method in class org.gbif.api.model.checklistbank.DatasetMetrics
 
setCountry(Country) - Method in class org.gbif.api.model.checklistbank.Distribution
 
setCountry(Country) - Method in class org.gbif.api.model.checklistbank.VernacularName
 
setCountry(Country) - Method in class org.gbif.api.model.collections.Address
 
setCountry(Country) - Method in class org.gbif.api.model.collections.Contact
 
setCountry(Country) - Method in class org.gbif.api.model.collections.lookup.LookupParams
 
setCountry(List<Country>) - Method in class org.gbif.api.model.collections.request.SearchRequest
 
setCountry(Country) - Method in class org.gbif.api.model.collections.search.CollectionsSearchResponse
 
setCountry(Country) - Method in class org.gbif.api.model.occurrence.Occurrence
 
setCountry(Country) - Method in interface org.gbif.api.model.registry.Address
 
setCountry(Country) - Method in class org.gbif.api.model.registry.Contact
 
setCountry(Country) - Method in class org.gbif.api.model.registry.Network
 
setCountry(Country) - Method in class org.gbif.api.model.registry.Node
 
setCountry(Country) - Method in class org.gbif.api.model.registry.Organization
 
setCountryCoverage(Set<Country>) - Method in class org.gbif.api.model.registry.Dataset
 
setCountryCoverage(Set<Country>) - Method in class org.gbif.api.model.registry.search.DatasetSearchResult
 
setCounts(List<Facet.Count>) - Method in class org.gbif.api.model.common.search.Facet
Sets the list of counts/categories for this faceted field.
setCoverages(List<TaxonomicCoverage>) - Method in class org.gbif.api.model.registry.eml.TaxonomicCoverages
 
setCrawlContext(String) - Method in class org.gbif.api.model.crawler.DatasetProcessStatus
 
setCrawlId(Integer) - Method in class org.gbif.api.model.occurrence.VerbatimOccurrence
 
setCrawlInfo(DatasetProcessStatus) - Method in class org.gbif.api.model.pipelines.IngestionProcess
 
setCrawlJob(CrawlJob) - Method in class org.gbif.api.model.crawler.DatasetProcessStatus
 
setCreated(Date) - Method in class org.gbif.api.model.checklistbank.DatasetMetrics
 
setCreated(Date) - Method in class org.gbif.api.model.collections.Collection
 
setCreated(Date) - Method in interface org.gbif.api.model.collections.CollectionEntity
 
setCreated(Date) - Method in class org.gbif.api.model.collections.Contact
 
setCreated(Date) - Method in class org.gbif.api.model.collections.Institution
 
setCreated(Date) - Method in class org.gbif.api.model.collections.MasterSourceMetadata
 
setCreated(Date) - Method in class org.gbif.api.model.collections.OccurrenceMapping
 
setCreated(Date) - Method in class org.gbif.api.model.collections.suggestions.Change
 
setCreated(Date) - Method in class org.gbif.api.model.common.MediaObject
 
setCreated(Date) - Method in class org.gbif.api.model.occurrence.Download
 
setCreated(LocalDateTime) - Method in class org.gbif.api.model.pipelines.PipelineExecution
 
setCreated(LocalDateTime) - Method in class org.gbif.api.model.pipelines.PipelineProcess
 
setCreated(Date) - Method in class org.gbif.api.model.registry.Comment
 
setCreated(Date) - Method in class org.gbif.api.model.registry.Contact
 
setCreated(Date) - Method in class org.gbif.api.model.registry.Dataset
Autoassigned in the database table, ignored when persisted.
setCreated(Date) - Method in class org.gbif.api.model.registry.Endpoint
 
setCreated(Date) - Method in class org.gbif.api.model.registry.Identifier
 
setCreated(Date) - Method in class org.gbif.api.model.registry.Installation
 
setCreated(Date) - Method in class org.gbif.api.model.registry.MachineTag
 
setCreated(Date) - Method in class org.gbif.api.model.registry.Metadata
 
setCreated(Date) - Method in class org.gbif.api.model.registry.Network
 
setCreated(Date) - Method in interface org.gbif.api.model.registry.NetworkEntity
 
setCreated(Date) - Method in class org.gbif.api.model.registry.Node
 
setCreated(Date) - Method in class org.gbif.api.model.registry.Organization
 
setCreated(Date) - Method in class org.gbif.api.model.registry.Tag
 
setCreatedBy(String) - Method in class org.gbif.api.model.collections.Collection
 
setCreatedBy(String) - Method in interface org.gbif.api.model.collections.CollectionEntity
 
setCreatedBy(String) - Method in class org.gbif.api.model.collections.Contact
 
setCreatedBy(String) - Method in class org.gbif.api.model.collections.Institution
 
setCreatedBy(String) - Method in class org.gbif.api.model.collections.MasterSourceMetadata
 
setCreatedBy(String) - Method in class org.gbif.api.model.collections.OccurrenceMapping
 
setCreatedBy(String) - Method in class org.gbif.api.model.pipelines.PipelineExecution
 
setCreatedBy(String) - Method in class org.gbif.api.model.pipelines.PipelineProcess
 
setCreatedBy(String) - Method in class org.gbif.api.model.pipelines.PipelineStep
 
setCreatedBy(String) - Method in class org.gbif.api.model.registry.Comment
 
setCreatedBy(String) - Method in class org.gbif.api.model.registry.Contact
 
setCreatedBy(String) - Method in class org.gbif.api.model.registry.Dataset
Persisted in the database table.
setCreatedBy(String) - Method in class org.gbif.api.model.registry.Endpoint
 
setCreatedBy(String) - Method in class org.gbif.api.model.registry.Identifier
 
setCreatedBy(String) - Method in class org.gbif.api.model.registry.Installation
 
setCreatedBy(String) - Method in class org.gbif.api.model.registry.MachineTag
 
setCreatedBy(String) - Method in class org.gbif.api.model.registry.Metadata
 
setCreatedBy(String) - Method in class org.gbif.api.model.registry.Network
 
setCreatedBy(String) - Method in interface org.gbif.api.model.registry.NetworkEntity
 
setCreatedBy(String) - Method in class org.gbif.api.model.registry.Node
 
setCreatedBy(String) - Method in class org.gbif.api.model.registry.Organization
 
setCreatedBy(String) - Method in class org.gbif.api.model.registry.Tag
 
setCreator(String) - Method in class org.gbif.api.model.checklistbank.Description
 
setCreator(String) - Method in class org.gbif.api.model.common.MediaObject
 
setCreator(String) - Method in class org.gbif.api.model.occurrence.DownloadRequest
 
setCultivarEpithet(String) - Method in class org.gbif.api.model.checklistbank.ParsedName
 
setCuratorialUnits(List<CuratorialUnitComposite>) - Method in class org.gbif.api.model.registry.Dataset
 
setCuratorialUnits(List<CuratorialUnitComposite>) - Method in class org.gbif.api.model.registry.eml.Collection
 
setData(String) - Method in class org.gbif.api.model.ChallengeCode
 
setDataDescriptions(List<DataDescription>) - Method in class org.gbif.api.model.registry.Dataset
 
setDataLanguage(Language) - Method in class org.gbif.api.model.registry.Dataset
 
setDatasetCitation(String) - Method in class org.gbif.api.model.registry.DatasetOccurrenceDownloadUsage
 
setDatasetDOI(DOI) - Method in class org.gbif.api.model.registry.DatasetOccurrenceDownloadUsage
 
setDatasetID(String) - Method in class org.gbif.api.model.occurrence.Occurrence
 
setDatasetKey(UUID) - Method in class org.gbif.api.model.checklistbank.DatasetMetrics
 
setDatasetKey(UUID) - Method in class org.gbif.api.model.checklistbank.NameUsage
 
setDatasetKey(UUID) - Method in class org.gbif.api.model.checklistbank.search.NameUsageSearchResult
 
setDatasetKey(UUID) - Method in class org.gbif.api.model.collections.CollectionImportParams
 
setDatasetKey(UUID) - Method in class org.gbif.api.model.collections.lookup.LookupParams
 
setDatasetKey(UUID) - Method in class org.gbif.api.model.collections.OccurrenceMapping
 
setDatasetKey(UUID) - Method in class org.gbif.api.model.crawler.DatasetProcessStatus
 
setDatasetKey(UUID) - Method in class org.gbif.api.model.occurrence.DownloadStatistics
 
setDatasetKey(UUID) - Method in class org.gbif.api.model.occurrence.VerbatimOccurrence
 
setDatasetKey(UUID) - Method in class org.gbif.api.model.pipelines.IngestionProcess
 
setDatasetKey(UUID) - Method in class org.gbif.api.model.pipelines.PipelineProcess
 
setDatasetKey(UUID) - Method in class org.gbif.api.model.pipelines.ws.PipelineProcessParameters
 
setDatasetKey(UUID) - Method in class org.gbif.api.model.pipelines.ws.SearchResult
 
setDatasetKey(UUID) - Method in class org.gbif.api.model.registry.DatasetOccurrenceDownloadUsage
 
setDatasetKey(UUID) - Method in class org.gbif.api.model.registry.Metadata
 
setDatasetName(String) - Method in class org.gbif.api.model.occurrence.Occurrence
 
setDatasetsToExclude(List<UUID>) - Method in class org.gbif.api.model.pipelines.ws.RunAllParams
 
setDatasetsToInclude(List<UUID>) - Method in class org.gbif.api.model.pipelines.ws.RunAllParams
 
setDatasetTitle(String) - Method in class org.gbif.api.model.pipelines.IngestionProcess
 
setDatasetTitle(String) - Method in class org.gbif.api.model.pipelines.PipelineProcess
 
setDatasetTitle(String) - Method in class org.gbif.api.model.registry.DatasetOccurrenceDownloadUsage
 
setDate(String) - Method in class org.gbif.api.model.checklistbank.Reference
Deprecated.
setDate(Date) - Method in class org.gbif.api.model.registry.eml.temporal.SingleDate
 
setDateIdentified(Date) - Method in class org.gbif.api.model.occurrence.Occurrence
 
setDateSignedMOU(Date) - Method in class org.gbif.api.model.registry.Node
 
setDay(Integer) - Method in class org.gbif.api.model.occurrence.Occurrence
 
setDecades(List<Integer>) - Method in class org.gbif.api.model.registry.search.DatasetSearchResult
 
setDecimalLatitude(Double) - Method in class org.gbif.api.model.occurrence.Occurrence
 
setDecimalLongitude(Double) - Method in class org.gbif.api.model.occurrence.Occurrence
 
setDeclaredCount(Long) - Method in class org.gbif.api.model.crawler.DatasetProcessStatus
 
setDegreeOfEstablishment(String) - Method in class org.gbif.api.model.occurrence.Occurrence
 
setDeleted(Date) - Method in class org.gbif.api.model.checklistbank.NameUsage
 
setDeleted(Date) - Method in class org.gbif.api.model.collections.Collection
 
setDeleted(Date) - Method in interface org.gbif.api.model.collections.CollectionEntity
 
setDeleted(Date) - Method in class org.gbif.api.model.collections.Institution
 
setDeleted(Date) - Method in class org.gbif.api.model.common.AbstractGbifUser
 
setDeleted(Date) - Method in class org.gbif.api.model.registry.Dataset
Persisted in the database table.
setDeleted(Date) - Method in class org.gbif.api.model.registry.Installation
 
setDeleted(Date) - Method in class org.gbif.api.model.registry.Network
 
setDeleted(Date) - Method in interface org.gbif.api.model.registry.NetworkEntity
 
setDeleted(Date) - Method in class org.gbif.api.model.registry.Node
 
setDeleted(Date) - Method in class org.gbif.api.model.registry.Organization
 
setDepartment(String) - Method in class org.gbif.api.model.collections.Collection
 
setDepth(Double) - Method in class org.gbif.api.model.occurrence.Occurrence
 
setDepthAccuracy(Double) - Method in class org.gbif.api.model.occurrence.Occurrence
 
setDescription(String) - Method in class org.gbif.api.model.checklistbank.Description
 
setDescription(String) - Method in class org.gbif.api.model.collections.AlternativeCode
 
setDescription(String) - Method in class org.gbif.api.model.collections.Collection
 
setDescription(String) - Method in interface org.gbif.api.model.collections.CollectionEntity
 
setDescription(String) - Method in class org.gbif.api.model.collections.Institution
 
setDescription(String) - Method in class org.gbif.api.model.common.MediaObject
 
setDescription(String) - Method in class org.gbif.api.model.registry.Contact
 
setDescription(String) - Method in class org.gbif.api.model.registry.Dataset
Persisted in the database table.
setDescription(String) - Method in class org.gbif.api.model.registry.eml.geospatial.GeospatialCoverage
 
setDescription(String) - Method in class org.gbif.api.model.registry.eml.Project
 
setDescription(String) - Method in class org.gbif.api.model.registry.eml.TaxonomicCoverages
 
setDescription(String) - Method in class org.gbif.api.model.registry.Endpoint
 
setDescription(String) - Method in class org.gbif.api.model.registry.Installation
 
setDescription(String) - Method in class org.gbif.api.model.registry.Network
 
setDescription(String) - Method in interface org.gbif.api.model.registry.NetworkEntity
 
setDescription(String) - Method in class org.gbif.api.model.registry.Node
 
setDescription(String) - Method in class org.gbif.api.model.registry.Organization
 
setDescription(String) - Method in class org.gbif.api.model.registry.search.DatasetSearchResult
 
setDescription(String) - Method in class org.gbif.api.model.registry.search.DatasetSuggestResult
 
setDescriptions(List<Description>) - Method in class org.gbif.api.model.checklistbank.NameUsageContainer
 
setDescriptions(List<Description>) - Method in class org.gbif.api.model.checklistbank.search.NameUsageSearchResult
 
setDesignDescription(String) - Method in class org.gbif.api.model.registry.eml.Project
 
setDetails(String) - Method in class org.gbif.api.model.registry.metasync.MetasyncHistory
 
setDeterminedBy(String) - Method in class org.gbif.api.model.occurrence.MeasurementOrFact
 
setDeterminedDate(String) - Method in class org.gbif.api.model.occurrence.MeasurementOrFact
 
setDeviation(int) - Method in class org.gbif.api.model.registry.eml.curatorial.CuratorialUnitComposite
 
setDeviation(int) - Method in class org.gbif.api.model.registry.eml.curatorial.CuratorialUnitCount
 
setDiagnostics(NameUsageMatch2.Diagnostics) - Method in class org.gbif.api.v2.NameUsageMatch2
 
setDimensions(Set<Dimension<?>>) - Method in class org.gbif.api.model.metrics.cube.Rollup
Where possible use the constructor and not this version
setDisabled(boolean) - Method in class org.gbif.api.model.registry.Installation
 
setDiscarded(Date) - Method in class org.gbif.api.model.collections.suggestions.BaseChangeSuggestion
 
setDiscarded(Date) - Method in interface org.gbif.api.model.collections.suggestions.ChangeSuggestion
 
setDiscardedBy(String) - Method in class org.gbif.api.model.collections.suggestions.BaseChangeSuggestion
 
setDiscardedBy(String) - Method in interface org.gbif.api.model.collections.suggestions.ChangeSuggestion
 
setDisciplines(List<Discipline>) - Method in class org.gbif.api.model.collections.Institution
 
setDisciplines(List<Discipline>) - Method in class org.gbif.api.model.collections.request.InstitutionSearchRequest
 
setDisplayOnNHCPortal(Boolean) - Method in class org.gbif.api.model.collections.Collection
 
setDisplayOnNHCPortal(Boolean) - Method in interface org.gbif.api.model.collections.CollectionEntity
 
setDisplayOnNHCPortal(Boolean) - Method in class org.gbif.api.model.collections.Institution
 
setDisplayOnNHCPortal(Boolean) - Method in class org.gbif.api.model.collections.request.SearchRequest
 
setDisplayOnNHCPortal(boolean) - Method in class org.gbif.api.model.collections.search.CollectionsSearchResponse
 
setDistanceFromCentroidInMeters(Double) - Method in class org.gbif.api.model.occurrence.Occurrence
 
setDistinctNamesCount(int) - Method in class org.gbif.api.model.checklistbank.DatasetMetrics
 
setDistributions(List<Distribution>) - Method in class org.gbif.api.model.checklistbank.NameUsageContainer
 
setDivision(String) - Method in class org.gbif.api.model.collections.Collection
 
setDoi(String) - Method in class org.gbif.api.model.checklistbank.Reference
 
setDoi(DOI) - Method in class org.gbif.api.model.collections.Collection
 
setDoi(DOI) - Method in class org.gbif.api.model.occurrence.Download
 
setDoi(DOI) - Method in class org.gbif.api.model.registry.Dataset
 
setDoi(DOI) - Method in class org.gbif.api.model.registry.search.DatasetSearchResult
 
setDownload(Download) - Method in class org.gbif.api.model.registry.DatasetOccurrenceDownloadUsage
 
setDownloaded(Date) - Method in class org.gbif.api.model.checklistbank.DatasetMetrics
 
setDownloadKey(String) - Method in class org.gbif.api.model.registry.DatasetOccurrenceDownloadUsage
 
setDownloadLink(String) - Method in class org.gbif.api.model.occurrence.Download
 
setDuplicateOfDatasetKey(UUID) - Method in class org.gbif.api.model.registry.Dataset
Persisted in the database table.
setDuplicates(List<Set<Duplicate>>) - Method in class org.gbif.api.model.collections.duplicates.DuplicatesResult
 
setEarliestAgeOrLowestStage(String) - Method in class org.gbif.api.model.occurrence.Occurrence
 
setEarliestEonOrLowestEonothem(String) - Method in class org.gbif.api.model.occurrence.Occurrence
 
setEarliestEpochOrLowestSeries(String) - Method in class org.gbif.api.model.occurrence.Occurrence
 
setEarliestEraOrLowestErathem(String) - Method in class org.gbif.api.model.occurrence.Occurrence
 
setEarliestPeriodOrLowestSystem(String) - Method in class org.gbif.api.model.occurrence.Occurrence
 
setElevation(Double) - Method in class org.gbif.api.model.occurrence.Occurrence
 
setElevationAccuracy(Double) - Method in class org.gbif.api.model.occurrence.Occurrence
 
setEmail(List<String>) - Method in class org.gbif.api.model.collections.Collection
 
setEmail(List<String>) - Method in interface org.gbif.api.model.collections.CollectionEntity
 
setEmail(List<String>) - Method in class org.gbif.api.model.collections.Contact
 
setEmail(List<String>) - Method in class org.gbif.api.model.collections.Institution
 
setEmail(String) - Method in class org.gbif.api.model.common.AbstractGbifUser
 
setEmail(String) - Method in class org.gbif.api.model.common.User
Deprecated.
 
setEmail(List<String>) - Method in interface org.gbif.api.model.registry.Address
 
setEmail(List<String>) - Method in class org.gbif.api.model.registry.Contact
 
setEmail(List<String>) - Method in class org.gbif.api.model.registry.Network
 
setEmail(List<String>) - Method in class org.gbif.api.model.registry.Node
 
setEmail(List<String>) - Method in class org.gbif.api.model.registry.Organization
 
setEnd(Date) - Method in class org.gbif.api.model.registry.eml.temporal.DateRange
 
setEndDayOfYear(Integer) - Method in class org.gbif.api.model.checklistbank.Distribution
 
setEndDayOfYear(Integer) - Method in class org.gbif.api.model.occurrence.Occurrence
 
setEndOfRecords(boolean) - Method in class org.gbif.api.model.common.paging.PagingResponse
Manually sets the end of records flag.
setEndorsed(Date) - Method in class org.gbif.api.model.registry.Organization
 
setEndorsementApproved(boolean) - Method in class org.gbif.api.model.registry.Organization
 
setEndorsementStatus(EndorsementStatus) - Method in class org.gbif.api.model.registry.Organization
 
setEndorsingNodeKey(UUID) - Method in class org.gbif.api.model.registry.Organization
 
setEndorsingNodeKey(UUID) - Method in class org.gbif.api.model.registry.search.DatasetSearchResult
 
setEndpoints(List<Endpoint>) - Method in class org.gbif.api.model.registry.Dataset
 
setEndpoints(List<Endpoint>) - Method in interface org.gbif.api.model.registry.Endpointable
 
setEndpoints(List<Endpoint>) - Method in class org.gbif.api.model.registry.Installation
 
setEndpoints(List<Endpoint>) - Method in class org.gbif.api.model.registry.Network
 
setEndpoints(List<Endpoint>) - Method in class org.gbif.api.model.registry.Node
 
setEndpoints(List<Endpoint>) - Method in class org.gbif.api.model.registry.Organization
 
setEntityCountry(Country) - Method in class org.gbif.api.model.collections.suggestions.BaseChangeSuggestion
 
setEntityCountry(Country) - Method in interface org.gbif.api.model.collections.suggestions.ChangeSuggestion
 
setEntityCreatedKey(UUID) - Method in class org.gbif.api.model.collections.suggestions.ApplySuggestionResult
 
setEntityKey(UUID) - Method in class org.gbif.api.model.collections.suggestions.BaseChangeSuggestion
 
setEntityKey(UUID) - Method in interface org.gbif.api.model.collections.suggestions.ChangeSuggestion
 
setEntityMatched(T) - Method in class org.gbif.api.model.collections.lookup.Match
 
setEntityName(String) - Method in class org.gbif.api.model.collections.suggestions.BaseChangeSuggestion
 
setEntityName(String) - Method in interface org.gbif.api.model.collections.suggestions.ChangeSuggestion
 
setEraseAfter(Date) - Method in class org.gbif.api.model.occurrence.Download
 
setErasureNotification(Date) - Method in class org.gbif.api.model.occurrence.Download
 
setEstablishedDate(String) - Method in class org.gbif.api.model.occurrence.OccurrenceRelation
 
setEstablishmentMeans(EstablishmentMeans) - Method in class org.gbif.api.model.checklistbank.Distribution
 
setEstablishmentMeans(String) - Method in class org.gbif.api.model.occurrence.Occurrence
 
setEventDate(IsoDateInterval) - Method in class org.gbif.api.model.occurrence.Occurrence
 
setExcludeKeys(List<UUID>) - Method in class org.gbif.api.model.collections.duplicates.DuplicatesRequest
 
setExecutionKey(int) - Method in class org.gbif.api.model.pipelines.ws.SearchResult
 
setExecutions(Set<PipelineExecution>) - Method in class org.gbif.api.model.pipelines.PipelineProcess
 
setExtended(boolean) - Method in class org.gbif.api.model.checklistbank.search.NameUsageSearchRequest
 
setExtensions(Map<Extension, List<Map<Term, String>>>) - Method in class org.gbif.api.model.checklistbank.VerbatimNameUsage
 
setExtensions(Map<String, List<Map<Term, String>>>) - Method in class org.gbif.api.model.occurrence.VerbatimOccurrence
 
setExternal(boolean) - Method in class org.gbif.api.model.registry.Dataset
Persisted in the database table.
setExtinct(Boolean) - Method in class org.gbif.api.model.checklistbank.search.NameUsageSearchResult
 
setExtinct(Boolean) - Method in class org.gbif.api.model.checklistbank.SpeciesProfile
 
setFacetLimit(Integer) - Method in class org.gbif.api.model.common.search.FacetedSearchRequest
 
setFacetMinCount(Integer) - Method in class org.gbif.api.model.common.search.FacetedSearchRequest
 
setFacetOffset(Integer) - Method in class org.gbif.api.model.common.search.FacetedSearchRequest
 
setFacetPages(Map<P, Pageable>) - Method in class org.gbif.api.model.common.search.FacetedSearchRequest
 
setFacets(Set<P>) - Method in class org.gbif.api.model.common.search.FacetedSearchRequest
Sets the list of facets.
setFacets(List<Facet<P>>) - Method in class org.gbif.api.model.common.search.SearchResponse
Sets the list of facets.
setFacts(List<MeasurementOrFact>) - Method in class org.gbif.api.model.occurrence.Occurrence
 
setFamily(String) - Method in class org.gbif.api.model.checklistbank.NameUsage
 
setFamily(String) - Method in class org.gbif.api.model.checklistbank.NameUsageMatch
 
setFamily(String) - Method in class org.gbif.api.model.checklistbank.search.NameUsageSearchResult
 
setFamily(String) - Method in class org.gbif.api.model.checklistbank.search.NameUsageSuggestResult
 
setFamily(String) - Method in interface org.gbif.api.model.common.LinneanClassification
 
setFamily(String) - Method in class org.gbif.api.model.occurrence.Occurrence
 
setFamilyKey(Integer) - Method in class org.gbif.api.model.checklistbank.NameUsage
 
setFamilyKey(Integer) - Method in class org.gbif.api.model.checklistbank.NameUsageMatch
 
setFamilyKey(Integer) - Method in class org.gbif.api.model.checklistbank.search.NameUsageSearchResult
 
setFamilyKey(Integer) - Method in class org.gbif.api.model.checklistbank.search.NameUsageSuggestResult
 
setFamilyKey(Integer) - Method in interface org.gbif.api.model.common.LinneanClassificationKeys
 
setFamilyKey(Integer) - Method in class org.gbif.api.model.occurrence.Occurrence
 
setFax(List<String>) - Method in class org.gbif.api.model.collections.Contact
 
setField(String) - Method in class org.gbif.api.model.collections.search.CollectionsSearchResponse.Match
 
setField(String) - Method in class org.gbif.api.model.collections.suggestions.Change
 
setField(T) - Method in class org.gbif.api.model.common.search.Facet
Sets the field of the facet.
setFieldName(String) - Method in class org.gbif.api.model.collections.SourceableField
 
setFields(Map<Term, String>) - Method in class org.gbif.api.model.checklistbank.VerbatimNameUsage
 
setFinished(boolean) - Method in class org.gbif.api.model.pipelines.PipelineExecution
 
setFinished(LocalDateTime) - Method in class org.gbif.api.model.pipelines.PipelineStep
 
setFinishedCrawling(Date) - Method in class org.gbif.api.model.crawler.DatasetProcessStatus
 
setFinishReason(FinishReason) - Method in class org.gbif.api.model.crawler.DatasetProcessStatus
 
setFirstName(String) - Method in class org.gbif.api.model.collections.Contact
 
setFirstName(String) - Method in class org.gbif.api.model.common.AbstractGbifUser
 
setFirstName(String) - Method in class org.gbif.api.model.common.User
Deprecated.
 
setFirstName(String) - Method in class org.gbif.api.model.registry.CitationContact
 
setFirstName(String) - Method in class org.gbif.api.model.registry.Contact
 
setFormat(String) - Method in class org.gbif.api.model.common.MediaObject
 
setFormat(DownloadFormat) - Method in class org.gbif.api.model.occurrence.DownloadRequest
This parameter determines the output format of the requested download.
setFormat(String) - Method in class org.gbif.api.model.registry.eml.DataDescription
 
setFormation(String) - Method in class org.gbif.api.model.occurrence.Occurrence
 
setFormatVersion(String) - Method in class org.gbif.api.model.registry.eml.DataDescription
 
setFoundingDate(Integer) - Method in class org.gbif.api.model.collections.Institution
 
setFragmentsEmitted(long) - Method in class org.gbif.api.model.crawler.DatasetProcessStatus
 
setFragmentsProcessed(long) - Method in class org.gbif.api.model.crawler.DatasetProcessStatus
 
setFragmentsReceived(long) - Method in class org.gbif.api.model.crawler.DatasetProcessStatus
 
setFreshwater(Boolean) - Method in class org.gbif.api.model.checklistbank.SpeciesProfile
 
setFrom(Temporal) - Method in class org.gbif.api.util.IsoDateInterval
 
setFrom(String) - Method in class org.gbif.api.util.IsoDateInterval
 
setFullText(String) - Method in class org.gbif.api.model.registry.search.DatasetSearchResult
 
setFunding(String) - Method in class org.gbif.api.model.registry.eml.Project
 
setFuzzyName(String) - Method in class org.gbif.api.model.collections.request.SearchRequest
 
setGadm(Gadm) - Method in class org.gbif.api.model.occurrence.Occurrence
 
setGbifRegion(List<GbifRegion>) - Method in class org.gbif.api.model.collections.request.SearchRequest
 
setGbifRegion(GbifRegion) - Method in class org.gbif.api.model.registry.Node
 
setGenerationDate(LocalDateTime) - Method in class org.gbif.api.model.collections.duplicates.DuplicatesResult
 
setGenericName(String) - Method in class org.gbif.api.model.occurrence.Occurrence
 
setGenus(String) - Method in class org.gbif.api.model.checklistbank.NameUsage
 
setGenus(String) - Method in class org.gbif.api.model.checklistbank.NameUsageMatch
 
setGenus(String) - Method in class org.gbif.api.model.checklistbank.search.NameUsageSearchResult
 
setGenus(String) - Method in class org.gbif.api.model.checklistbank.search.NameUsageSuggestResult
 
setGenus(String) - Method in interface org.gbif.api.model.common.LinneanClassification
 
setGenus(String) - Method in class org.gbif.api.model.occurrence.Occurrence
 
setGenusKey(Integer) - Method in class org.gbif.api.model.checklistbank.NameUsage
 
setGenusKey(Integer) - Method in class org.gbif.api.model.checklistbank.NameUsageMatch
 
setGenusKey(Integer) - Method in class org.gbif.api.model.checklistbank.search.NameUsageSearchResult
 
setGenusKey(Integer) - Method in class org.gbif.api.model.checklistbank.search.NameUsageSuggestResult
 
setGenusKey(Integer) - Method in interface org.gbif.api.model.common.LinneanClassificationKeys
 
setGenusKey(Integer) - Method in class org.gbif.api.model.occurrence.Occurrence
 
setGenusOrAbove(String) - Method in class org.gbif.api.model.checklistbank.ParsedName
 
setGeographicCoverageDescription(String) - Method in class org.gbif.api.model.registry.Dataset
 
setGeographicCoverages(List<GeospatialCoverage>) - Method in class org.gbif.api.model.registry.Dataset
 
setGeographicDescription(String) - Method in class org.gbif.api.model.collections.Institution
 
setGeography(String) - Method in class org.gbif.api.model.collections.Collection
 
setGeoreferencedBy(String) - Method in class org.gbif.api.model.occurrence.Occurrence
 
setGid(String) - Method in class org.gbif.api.model.occurrence.GadmFeature
 
setGlobalCoverage(double, double, double, double) - Method in class org.gbif.api.model.registry.eml.geospatial.BoundingBox
Set whether this binding box represents global coverage or not.
setGroup(String) - Method in class org.gbif.api.model.occurrence.Occurrence
 
setHabitat(String) - Method in class org.gbif.api.model.checklistbank.SpeciesProfile
 
setHabitats(List<Habitat>) - Method in class org.gbif.api.model.checklistbank.search.NameUsageSearchResult
 
setHigherGeography(String) - Method in class org.gbif.api.model.occurrence.Occurrence
 
setHigherRank(LinneanClassification, Rank, String) - Static method in class org.gbif.api.util.ClassificationUtils
Sets a higher taxon property by passing the rank of it.
setHigherRank(T, Rank, String, Integer) - Static method in class org.gbif.api.util.ClassificationUtils
Sets a higher taxon property by passing the rank of it.
setHigherRankKey(LinneanClassificationKeys, Rank, Integer) - Static method in class org.gbif.api.util.ClassificationUtils
Sets a higher taxon property by passing the rank of it.
setHighestBiostratigraphicZone(String) - Method in class org.gbif.api.model.occurrence.Occurrence
 
setHighlight(boolean) - Method in class org.gbif.api.model.common.search.SearchRequest
 
setHighlightContext(Integer) - Method in class org.gbif.api.model.checklistbank.search.NameUsageSearchRequest
 
setHighlightContext(Integer) - Method in class org.gbif.api.model.registry.search.DatasetSearchRequest
 
setHighlightFields(Set<SearchRequest.QueryField>) - Method in class org.gbif.api.model.common.search.SearchRequest
 
setHomepage(URI) - Method in class org.gbif.api.model.collections.Collection
 
setHomepage(URI) - Method in class org.gbif.api.model.collections.Institution
 
setHomepage(List<URI>) - Method in interface org.gbif.api.model.registry.Address
 
setHomepage(List<URI>) - Method in class org.gbif.api.model.registry.Contact
 
setHomepage(URI) - Method in class org.gbif.api.model.registry.Dataset
Persisted in the database table.
setHomepage(List<URI>) - Method in class org.gbif.api.model.registry.Network
 
setHomepage(List<URI>) - Method in class org.gbif.api.model.registry.Node
 
setHomepage(List<URI>) - Method in class org.gbif.api.model.registry.Organization
 
setHostingCountry(Country) - Method in class org.gbif.api.model.registry.search.DatasetSearchResult
 
setHostingOrganizationKey(UUID) - Method in class org.gbif.api.model.occurrence.VerbatimOccurrence
 
setHostingOrganizationKey(UUID) - Method in class org.gbif.api.model.registry.search.DatasetSearchResult
 
setHostingOrganizationTitle(String) - Method in class org.gbif.api.model.registry.search.DatasetSearchResult
 
setHybrid(Boolean) - Method in class org.gbif.api.model.checklistbank.SpeciesProfile
 
setHybridFormula(boolean) - Method in class org.gbif.api.model.checklistbank.ParsedName
 
setId(String) - Method in class org.gbif.api.model.collections.UserId
 
setId(String) - Method in class org.gbif.api.model.occurrence.MeasurementOrFact
 
setId(String) - Method in class org.gbif.api.model.occurrence.OccurrenceRelation
 
setId(String) - Method in class org.gbif.api.v2.NameUsageMatch2.Nomenclature
 
setIdentifiedBy(String) - Method in class org.gbif.api.model.occurrence.Occurrence
 
setIdentifiedByIds(List<AgentIdentifier>) - Method in class org.gbif.api.model.occurrence.Occurrence
 
setIdentifier(String) - Method in class org.gbif.api.model.collections.OccurrenceMapping
 
setIdentifier(String) - Method in class org.gbif.api.model.collections.request.SearchRequest
 
setIdentifier(String) - Method in class org.gbif.api.model.common.Identifier
 
setIdentifier(URI) - Method in class org.gbif.api.model.common.MediaObject
 
setIdentifier(String) - Method in class org.gbif.api.model.registry.Citation
 
setIdentifier(String) - Method in class org.gbif.api.model.registry.eml.Collection
 
setIdentifier(String) - Method in class org.gbif.api.model.registry.eml.Project
 
setIdentifier(String) - Method in class org.gbif.api.model.registry.Identifier
 
setIdentifiers(List<Identifier>) - Method in class org.gbif.api.model.checklistbank.NameUsageContainer
 
setIdentifiers(List<Identifier>) - Method in class org.gbif.api.model.collections.Collection
 
setIdentifiers(List<Identifier>) - Method in class org.gbif.api.model.collections.Institution
 
setIdentifiers(List<Identifier>) - Method in class org.gbif.api.model.occurrence.Occurrence
 
setIdentifiers(List<Identifier>) - Method in class org.gbif.api.model.registry.Dataset
 
setIdentifiers(List<Identifier>) - Method in interface org.gbif.api.model.registry.Identifiable
 
setIdentifiers(List<Identifier>) - Method in class org.gbif.api.model.registry.Installation
 
setIdentifiers(List<Identifier>) - Method in class org.gbif.api.model.registry.Network
 
setIdentifiers(List<Identifier>) - Method in class org.gbif.api.model.registry.Node
 
setIdentifiers(List<Identifier>) - Method in class org.gbif.api.model.registry.Organization
 
setIdentifierType(IdentifierType) - Method in class org.gbif.api.model.collections.request.SearchRequest
 
setIdigbio(boolean) - Method in class org.gbif.api.model.collections.duplicates.Duplicate
 
setIh(boolean) - Method in class org.gbif.api.model.collections.duplicates.Duplicate
 
setImportantCollectors(List<String>) - Method in class org.gbif.api.model.collections.Collection
 
setIncorporatedCollections(List<String>) - Method in class org.gbif.api.model.collections.Collection
 
setInCountries(List<String>) - Method in class org.gbif.api.model.collections.duplicates.DuplicatesRequest
 
setIndexHerbariorumRecord(boolean) - Method in class org.gbif.api.model.collections.Collection
 
setIndexHerbariorumRecord(boolean) - Method in class org.gbif.api.model.collections.Institution
 
setIndividualCount(Integer) - Method in class org.gbif.api.model.occurrence.Occurrence
 
setInfraGeneric(String) - Method in class org.gbif.api.model.checklistbank.ParsedName
 
setInfraSpecificEpithet(String) - Method in class org.gbif.api.model.checklistbank.ParsedName
 
setInfraspecificEpithet(String) - Method in class org.gbif.api.model.occurrence.Occurrence
 
setInInstitutions(List<UUID>) - Method in class org.gbif.api.model.collections.duplicates.DuplicatesRequest
 
setInstallationKey(UUID) - Method in class org.gbif.api.model.occurrence.VerbatimOccurrence
 
setInstallationKey(UUID) - Method in class org.gbif.api.model.registry.Dataset
Persisted in the database table.
setInstallationKey(UUID) - Method in class org.gbif.api.model.registry.metasync.MetasyncHistory
 
setInstitution(UUID) - Method in class org.gbif.api.model.collections.request.CollectionSearchRequest
 
setInstitutionalGovernance(InstitutionGovernance) - Method in class org.gbif.api.model.collections.Institution
 
setInstitutionalGovernance(InstitutionGovernance) - Method in class org.gbif.api.model.collections.request.InstitutionSearchRequest
 
setInstitutionCode(String) - Method in class org.gbif.api.model.checklistbank.TypeSpecimen
Deprecated.
setInstitutionCode(String) - Method in class org.gbif.api.model.collections.InstitutionImportParams
 
setInstitutionCode(String) - Method in class org.gbif.api.model.collections.lookup.CollectionMatched
 
setInstitutionCode(String) - Method in class org.gbif.api.model.collections.lookup.LookupParams
 
setInstitutionCode(String) - Method in class org.gbif.api.model.collections.search.CollectionsSearchResponse
 
setInstitutionCode(String) - Method in class org.gbif.api.model.collections.view.CollectionView
 
setInstitutionCode(String) - Method in class org.gbif.api.model.metrics.RecordError
Deprecated.
 
setInstitutionForConvertedCollection(UUID) - Method in class org.gbif.api.model.collections.suggestions.InstitutionChangeSuggestion
 
setInstitutionForNewCollectionKey(UUID) - Method in class org.gbif.api.model.collections.merge.ConvertToCollectionParams
 
setInstitutionId(String) - Method in class org.gbif.api.model.collections.lookup.LookupParams
 
setInstitutionKey(UUID) - Method in class org.gbif.api.model.collections.Collection
 
setInstitutionKey(UUID) - Method in class org.gbif.api.model.collections.duplicates.Duplicate
 
setInstitutionKey(UUID) - Method in class org.gbif.api.model.collections.lookup.CollectionMatched
 
setInstitutionKey(UUID) - Method in class org.gbif.api.model.collections.search.CollectionsSearchResponse
 
setInstitutionKey(String) - Method in class org.gbif.api.model.occurrence.Occurrence
 
setInstitutionKeys(List<UUID>) - Method in class org.gbif.api.model.collections.request.SearchRequest
 
setInstitutionLink(URI) - Method in class org.gbif.api.model.collections.lookup.CollectionMatched
 
setInstitutionMatch(Match<InstitutionMatched>) - Method in class org.gbif.api.model.collections.lookup.LookupResult
 
setInstitutionMatches(List<Match<InstitutionMatched>>) - Method in class org.gbif.api.model.collections.lookup.AlternativeMatches
 
setInstitutionName(String) - Method in class org.gbif.api.model.collections.lookup.CollectionMatched
 
setInstitutionName(String) - Method in class org.gbif.api.model.collections.search.CollectionsSearchResponse
 
setInstitutionName(String) - Method in class org.gbif.api.model.collections.view.CollectionView
 
setInterpreted(I) - Method in class org.gbif.api.model.common.InterpretedField
Deprecated.
 
setInterpretedOccurrencesPersistedError(long) - Method in class org.gbif.api.model.crawler.DatasetProcessStatus
 
setInterpretedOccurrencesPersistedSuccessful(long) - Method in class org.gbif.api.model.crawler.DatasetProcessStatus
 
setIsInCluster(boolean) - Method in class org.gbif.api.model.occurrence.Occurrence
 
setIsSequenced(boolean) - Method in class org.gbif.api.model.occurrence.Occurrence
 
setIssues(Set<NameUsageIssue>) - Method in class org.gbif.api.model.checklistbank.NameUsage
 
setIssues(Set<OccurrenceIssue>) - Method in class org.gbif.api.model.occurrence.Occurrence
 
setIucnRedListCategory(String) - Method in class org.gbif.api.model.occurrence.Occurrence
 
setKey(Integer) - Method in class org.gbif.api.model.ChallengeCode
 
setKey(int) - Method in class org.gbif.api.model.checklistbank.DatasetMetrics
 
setKey(Integer) - Method in class org.gbif.api.model.checklistbank.Description
 
setKey(Integer) - Method in class org.gbif.api.model.checklistbank.NameUsage
 
setKey(Integer) - Method in class org.gbif.api.model.checklistbank.NameUsageMetrics
 
setKey(Integer) - Method in class org.gbif.api.model.checklistbank.ParsedName
 
setKey(Integer) - Method in class org.gbif.api.model.checklistbank.search.NameUsageSearchResult
 
setKey(Integer) - Method in class org.gbif.api.model.checklistbank.search.NameUsageSuggestResult
 
setKey(Integer) - Method in class org.gbif.api.model.checklistbank.VerbatimNameUsage
 
setKey(Integer) - Method in class org.gbif.api.model.collections.Address
 
setKey(UUID) - Method in class org.gbif.api.model.collections.Collection
 
setKey(UUID) - Method in interface org.gbif.api.model.collections.CollectionEntity
 
setKey(Integer) - Method in class org.gbif.api.model.collections.Contact
 
setKey(UUID) - Method in class org.gbif.api.model.collections.duplicates.Duplicate
 
setKey(UUID) - Method in class org.gbif.api.model.collections.Institution
 
setKey(UUID) - Method in class org.gbif.api.model.collections.lookup.BaseEntityMatched
 
setKey(Integer) - Method in class org.gbif.api.model.collections.MasterSourceMetadata
 
setKey(Integer) - Method in class org.gbif.api.model.collections.OccurrenceMapping
 
setKey(UUID) - Method in class org.gbif.api.model.collections.search.CollectionsSearchResponse
 
setKey(Integer) - Method in class org.gbif.api.model.collections.suggestions.BaseChangeSuggestion
 
setKey(Integer) - Method in interface org.gbif.api.model.collections.suggestions.ChangeSuggestion
 
setKey(Integer) - Method in class org.gbif.api.model.common.GbifUser
 
setKey(Integer) - Method in class org.gbif.api.model.common.User
Deprecated.
 
setKey(String) - Method in class org.gbif.api.model.metrics.cube.Dimension
 
setKey(String) - Method in class org.gbif.api.model.occurrence.Download
 
setKey(Long) - Method in class org.gbif.api.model.occurrence.VerbatimOccurrence
 
setKey(long) - Method in class org.gbif.api.model.pipelines.PipelineExecution
 
setKey(long) - Method in class org.gbif.api.model.pipelines.PipelineStep
 
setKey(Integer) - Method in class org.gbif.api.model.registry.CitationContact
 
setKey(Integer) - Method in class org.gbif.api.model.registry.Comment
 
setKey(Integer) - Method in class org.gbif.api.model.registry.Contact
 
setKey(UUID) - Method in class org.gbif.api.model.registry.Dataset
Persisted in the database table.
setKey(Integer) - Method in class org.gbif.api.model.registry.Endpoint
 
setKey(Integer) - Method in class org.gbif.api.model.registry.Identifier
 
setKey(UUID) - Method in class org.gbif.api.model.registry.Installation
 
setKey(Integer) - Method in class org.gbif.api.model.registry.MachineTag
 
setKey(Integer) - Method in class org.gbif.api.model.registry.Metadata
 
setKey(UUID) - Method in class org.gbif.api.model.registry.Network
 
setKey(UUID) - Method in interface org.gbif.api.model.registry.NetworkEntity
 
setKey(UUID) - Method in class org.gbif.api.model.registry.Node
 
setKey(UUID) - Method in class org.gbif.api.model.registry.Organization
 
setKey(UUID) - Method in class org.gbif.api.model.registry.search.collections.KeyCodeNameResult
 
setKey(UUID) - Method in class org.gbif.api.model.registry.search.DatasetSearchResult
 
setKey(UUID) - Method in class org.gbif.api.model.registry.search.DatasetSuggestResult
 
setKey(UUID) - Method in class org.gbif.api.model.registry.search.KeyTitleResult
 
setKey(Integer) - Method in class org.gbif.api.model.registry.Tag
 
setKey(int) - Method in class org.gbif.api.v2.RankedName
 
setKeywordCollections(List<KeywordCollection>) - Method in class org.gbif.api.model.registry.Dataset
 
setKeywords(Set<String>) - Method in class org.gbif.api.model.registry.eml.KeywordCollection
 
setKeywords(List<String>) - Method in class org.gbif.api.model.registry.search.DatasetSearchResult
 
setKingdom(String) - Method in class org.gbif.api.model.checklistbank.NameUsage
 
setKingdom(String) - Method in class org.gbif.api.model.checklistbank.NameUsageMatch
 
setKingdom(String) - Method in class org.gbif.api.model.checklistbank.search.NameUsageSearchResult
 
setKingdom(String) - Method in class org.gbif.api.model.checklistbank.search.NameUsageSuggestResult
 
setKingdom(String) - Method in interface org.gbif.api.model.common.LinneanClassification
 
setKingdom(String) - Method in class org.gbif.api.model.occurrence.Occurrence
 
setKingdomKey(Integer) - Method in class org.gbif.api.model.checklistbank.NameUsage
 
setKingdomKey(Integer) - Method in class org.gbif.api.model.checklistbank.NameUsageMatch
 
setKingdomKey(Integer) - Method in class org.gbif.api.model.checklistbank.search.NameUsageSearchResult
 
setKingdomKey(Integer) - Method in class org.gbif.api.model.checklistbank.search.NameUsageSuggestResult
 
setKingdomKey(Integer) - Method in interface org.gbif.api.model.common.LinneanClassificationKeys
 
setKingdomKey(Integer) - Method in class org.gbif.api.model.occurrence.Occurrence
 
setLanguage(Language) - Method in class org.gbif.api.model.checklistbank.Description
 
setLanguage(Language) - Method in class org.gbif.api.model.checklistbank.VernacularName
 
setLanguage(Language) - Method in class org.gbif.api.model.registry.Dataset
Persisted in the database table.
setLanguage(Language) - Method in class org.gbif.api.model.registry.Network
 
setLanguage(Language) - Method in class org.gbif.api.model.registry.Organization
 
setLastCrawled(Date) - Method in class org.gbif.api.model.checklistbank.NameUsage
 
setLastCrawled(Date) - Method in class org.gbif.api.model.checklistbank.VerbatimNameUsage
 
setLastCrawled(Date) - Method in class org.gbif.api.model.occurrence.VerbatimOccurrence
 
setLastInterpreted(Date) - Method in class org.gbif.api.model.checklistbank.NameUsage
 
setLastInterpreted(Date) - Method in class org.gbif.api.model.occurrence.Occurrence
 
setLastLogin(Date) - Method in class org.gbif.api.model.common.GbifUser
 
setLastLogin(Date) - Method in class org.gbif.api.model.common.User
Deprecated.
 
setLastName(String) - Method in class org.gbif.api.model.collections.Contact
 
setLastName(String) - Method in class org.gbif.api.model.common.AbstractGbifUser
 
setLastName(String) - Method in class org.gbif.api.model.common.User
Deprecated.
 
setLastName(String) - Method in class org.gbif.api.model.registry.CitationContact
 
setLastName(String) - Method in class org.gbif.api.model.registry.Contact
 
setLastParsed(Date) - Method in class org.gbif.api.model.occurrence.VerbatimOccurrence
 
setLastStep(PipelineStep) - Method in class org.gbif.api.model.pipelines.WorkflowStep
 
setLatestAgeOrHighestStage(String) - Method in class org.gbif.api.model.occurrence.Occurrence
 
setLatestEonOrHighestEonothem(String) - Method in class org.gbif.api.model.occurrence.Occurrence
 
setLatestEpochOrHighestSeries(String) - Method in class org.gbif.api.model.occurrence.Occurrence
 
setLatestEraOrHighestErathem(String) - Method in class org.gbif.api.model.occurrence.Occurrence
 
setLatestPeriodOrHighestSystem(String) - Method in class org.gbif.api.model.occurrence.Occurrence
 
setLatitude(BigDecimal) - Method in class org.gbif.api.model.collections.Institution
 
setLatitude(double) - Method in class org.gbif.api.model.registry.eml.geospatial.Point
 
setLatitude(BigDecimal) - Method in class org.gbif.api.model.registry.Organization
 
setLevel0(GadmFeature) - Method in class org.gbif.api.model.occurrence.Gadm
 
setLevel1(GadmFeature) - Method in class org.gbif.api.model.occurrence.Gadm
 
setLevel2(GadmFeature) - Method in class org.gbif.api.model.occurrence.Gadm
 
setLevel3(GadmFeature) - Method in class org.gbif.api.model.occurrence.Gadm
 
setLicense(String) - Method in class org.gbif.api.model.checklistbank.Description
 
setLicense(String) - Method in class org.gbif.api.model.common.MediaObject
 
setLicense(License) - Method in class org.gbif.api.model.occurrence.Download
 
setLicense(License) - Method in class org.gbif.api.model.occurrence.Occurrence
 
setLicense(License) - Method in class org.gbif.api.model.registry.Dataset
Persisted in the database table.
setLicense(License) - Method in class org.gbif.api.model.registry.search.DatasetSearchResult
 
setLifeForm(String) - Method in class org.gbif.api.model.checklistbank.SpeciesProfile
 
setLifeStage(LifeStage) - Method in class org.gbif.api.model.checklistbank.Distribution
 
setLifeStage(LifeStage) - Method in class org.gbif.api.model.checklistbank.VernacularName
 
setLifeStage(String) - Method in class org.gbif.api.model.occurrence.Occurrence
 
setLimit(int) - Method in class org.gbif.api.model.common.paging.PageableBase
 
setLineage(List<String>) - Method in class org.gbif.api.v2.NameUsageMatch2.Diagnostics
 
setLink(String) - Method in class org.gbif.api.model.checklistbank.Reference
 
setLivingPeriod(String) - Method in class org.gbif.api.model.checklistbank.SpeciesProfile
 
setLocality(String) - Method in class org.gbif.api.model.checklistbank.Distribution
 
setLocality(String) - Method in class org.gbif.api.model.checklistbank.TypeSpecimen
Deprecated.
setLocationId(String) - Method in class org.gbif.api.model.checklistbank.Distribution
 
setLockedForAutoUpdate(boolean) - Method in class org.gbif.api.model.registry.Dataset
Persisted in the database table.
setLogoUrl(URI) - Method in class org.gbif.api.model.collections.Institution
 
setLogoUrl(URI) - Method in class org.gbif.api.model.registry.Dataset
Persisted in the database table.
setLogoUrl(URI) - Method in class org.gbif.api.model.registry.Network
 
setLogoUrl(URI) - Method in class org.gbif.api.model.registry.Node
 
setLogoUrl(URI) - Method in class org.gbif.api.model.registry.Organization
 
setLongitude(BigDecimal) - Method in class org.gbif.api.model.collections.Institution
 
setLongitude(double) - Method in class org.gbif.api.model.registry.eml.geospatial.Point
 
setLongitude(BigDecimal) - Method in class org.gbif.api.model.registry.Organization
 
setLower(int) - Method in class org.gbif.api.model.registry.eml.curatorial.CuratorialUnitComposite
 
setLower(int) - Method in class org.gbif.api.model.registry.eml.curatorial.CuratorialUnitRange
 
setLowestBiostratigraphicZone(String) - Method in class org.gbif.api.model.occurrence.Occurrence
 
setMachineTagName(String) - Method in class org.gbif.api.model.collections.request.SearchRequest
 
setMachineTagNamespace(String) - Method in class org.gbif.api.model.collections.request.SearchRequest
 
setMachineTags(List<MachineTag>) - Method in class org.gbif.api.model.collections.Collection
 
setMachineTags(List<MachineTag>) - Method in class org.gbif.api.model.collections.Institution
 
setMachineTags(List<MachineTag>) - Method in class org.gbif.api.model.registry.Dataset
 
setMachineTags(List<MachineTag>) - Method in class org.gbif.api.model.registry.Endpoint
 
setMachineTags(List<MachineTag>) - Method in class org.gbif.api.model.registry.Installation
 
setMachineTags(List<MachineTag>) - Method in interface org.gbif.api.model.registry.MachineTaggable
 
setMachineTags(List<MachineTag>) - Method in class org.gbif.api.model.registry.Network
 
setMachineTags(List<MachineTag>) - Method in class org.gbif.api.model.registry.Node
 
setMachineTags(List<MachineTag>) - Method in class org.gbif.api.model.registry.Organization
 
setMachineTagValue(String) - Method in class org.gbif.api.model.collections.request.SearchRequest
 
setMailingAddress(Address) - Method in class org.gbif.api.model.collections.Collection
 
setMailingAddress(Address) - Method in interface org.gbif.api.model.collections.Contactable
 
setMailingAddress(Address) - Method in class org.gbif.api.model.collections.Institution
 
setMailingCity(String) - Method in class org.gbif.api.model.collections.duplicates.Duplicate
 
setMailingCountry(Country) - Method in class org.gbif.api.model.collections.duplicates.Duplicate
 
setMailingCountry(Country) - Method in class org.gbif.api.model.collections.search.CollectionsSearchResponse
 
setMaintenanceDescription(String) - Method in class org.gbif.api.model.registry.Dataset
 
setMaintenanceUpdateFrequency(MaintenanceUpdateFrequency) - Method in class org.gbif.api.model.registry.Dataset
Persisted in the database table.
setMarine(Boolean) - Method in class org.gbif.api.model.checklistbank.SpeciesProfile
 
setMassInGram(Integer) - Method in class org.gbif.api.model.checklistbank.SpeciesProfile
 
setMasterSource(MasterSourceType) - Method in class org.gbif.api.model.collections.Collection
 
setMasterSource(MasterSourceType) - Method in interface org.gbif.api.model.collections.CollectionEntity
 
setMasterSource(MasterSourceType) - Method in class org.gbif.api.model.collections.Institution
 
setMasterSource(MasterSourceType) - Method in class org.gbif.api.model.collections.SourceableField.Source
 
setMasterSourceMetadata(MasterSourceMetadata) - Method in class org.gbif.api.model.collections.Collection
 
setMasterSourceMetadata(MasterSourceMetadata) - Method in interface org.gbif.api.model.collections.CollectionEntity
 
setMasterSourceMetadata(MasterSourceMetadata) - Method in class org.gbif.api.model.collections.Institution
 
setMasterSourceType(MasterSourceType) - Method in class org.gbif.api.model.collections.request.SearchRequest
 
setMatchCase(Boolean) - Method in class org.gbif.api.model.occurrence.search.OccurrenceSearchRequest
 
setMatches(Set<CollectionsSearchResponse.Match>) - Method in class org.gbif.api.model.collections.search.CollectionsSearchResponse
 
setMatchType(NameUsageMatch.MatchType) - Method in class org.gbif.api.model.checklistbank.NameUsageMatch
 
setMatchType(Match.MatchType) - Method in class org.gbif.api.model.collections.lookup.Match
 
setMatchType(NameUsageMatch.MatchType) - Method in class org.gbif.api.v2.NameUsageMatch2.Diagnostics
 
setMaxLatitude(double) - Method in class org.gbif.api.model.registry.eml.geospatial.BoundingBox
 
setMaxLongitude(double) - Method in class org.gbif.api.model.registry.eml.geospatial.BoundingBox
 
setMedia(List<NameUsageMediaObject>) - Method in class org.gbif.api.model.checklistbank.NameUsageContainer
 
setMedia(List<MediaObject>) - Method in class org.gbif.api.model.occurrence.Occurrence
 
setMember(String) - Method in class org.gbif.api.model.occurrence.Occurrence
 
setMergeTargetKey(UUID) - Method in class org.gbif.api.model.collections.suggestions.BaseChangeSuggestion
 
setMergeTargetKey(UUID) - Method in interface org.gbif.api.model.collections.suggestions.ChangeSuggestion
 
setMessage(String) - Method in class org.gbif.api.model.common.messaging.Response
 
setMessage(String) - Method in class org.gbif.api.model.pipelines.PipelineStep
 
setMessage(String) - Method in class org.gbif.api.model.pipelines.RunPipelineResponse.Builder
 
setMessageKey(String) - Method in class org.gbif.api.model.common.messaging.Response
 
setMethod(String) - Method in class org.gbif.api.model.occurrence.MeasurementOrFact
 
setMethodSteps(List<String>) - Method in class org.gbif.api.model.registry.eml.SamplingDescription
 
setMetrics(Set<PipelineStep.MetricInfo>) - Method in class org.gbif.api.model.pipelines.PipelineStep
 
setMinLatitude(double) - Method in class org.gbif.api.model.registry.eml.geospatial.BoundingBox
 
setMinLongitude(double) - Method in class org.gbif.api.model.registry.eml.geospatial.BoundingBox
 
setModified(Date) - Method in class org.gbif.api.model.checklistbank.NameUsage
 
setModified(Date) - Method in class org.gbif.api.model.collections.Collection
 
setModified(Date) - Method in interface org.gbif.api.model.collections.CollectionEntity
 
setModified(Date) - Method in class org.gbif.api.model.collections.Contact
 
setModified(Date) - Method in class org.gbif.api.model.collections.Institution
 
setModified(Date) - Method in class org.gbif.api.model.collections.suggestions.BaseChangeSuggestion
 
setModified(Date) - Method in interface org.gbif.api.model.collections.suggestions.ChangeSuggestion
 
setModified(Date) - Method in class org.gbif.api.model.occurrence.Download
 
setModified(Date) - Method in class org.gbif.api.model.occurrence.Occurrence
 
setModified(LocalDateTime) - Method in class org.gbif.api.model.pipelines.PipelineStep
 
setModified(Date) - Method in class org.gbif.api.model.registry.Comment
 
setModified(Date) - Method in class org.gbif.api.model.registry.Contact
 
setModified(Date) - Method in class org.gbif.api.model.registry.Dataset
Persisted in the database table.
setModified(Date) - Method in class org.gbif.api.model.registry.Endpoint
 
setModified(Date) - Method in class org.gbif.api.model.registry.Installation
 
setModified(Date) - Method in class org.gbif.api.model.registry.Metadata
 
setModified(Date) - Method in class org.gbif.api.model.registry.Network
 
setModified(Date) - Method in interface org.gbif.api.model.registry.NetworkEntity
 
setModified(Date) - Method in class org.gbif.api.model.registry.Node
 
setModified(Date) - Method in class org.gbif.api.model.registry.Organization
 
setModifiedBy(String) - Method in class org.gbif.api.model.collections.Collection
 
setModifiedBy(String) - Method in interface org.gbif.api.model.collections.CollectionEntity
 
setModifiedBy(String) - Method in class org.gbif.api.model.collections.Contact
 
setModifiedBy(String) - Method in class org.gbif.api.model.collections.Institution
 
setModifiedBy(String) - Method in class org.gbif.api.model.collections.suggestions.BaseChangeSuggestion
 
setModifiedBy(String) - Method in interface org.gbif.api.model.collections.suggestions.ChangeSuggestion
 
setModifiedBy(String) - Method in class org.gbif.api.model.pipelines.PipelineStep
 
setModifiedBy(String) - Method in class org.gbif.api.model.registry.Comment
 
setModifiedBy(String) - Method in class org.gbif.api.model.registry.Contact
 
setModifiedBy(String) - Method in class org.gbif.api.model.registry.Dataset
Persisted in the database table.
setModifiedBy(String) - Method in class org.gbif.api.model.registry.Endpoint
 
setModifiedBy(String) - Method in class org.gbif.api.model.registry.Installation
 
setModifiedBy(String) - Method in class org.gbif.api.model.registry.Metadata
 
setModifiedBy(String) - Method in class org.gbif.api.model.registry.Network
 
setModifiedBy(String) - Method in interface org.gbif.api.model.registry.NetworkEntity
 
setModifiedBy(String) - Method in class org.gbif.api.model.registry.Node
 
setModifiedBy(String) - Method in class org.gbif.api.model.registry.Organization
 
setMonth(Integer) - Method in class org.gbif.api.model.occurrence.Occurrence
 
setMultiSelectFacets(boolean) - Method in class org.gbif.api.model.common.search.FacetedSearchRequest
 
setName(String) - Method in class org.gbif.api.model.collections.Collection
 
setName(String) - Method in interface org.gbif.api.model.collections.CollectionEntity
 
setName(String) - Method in class org.gbif.api.model.collections.duplicates.Duplicate
 
setName(String) - Method in class org.gbif.api.model.collections.Institution
 
setName(String) - Method in class org.gbif.api.model.collections.lookup.BaseEntityMatched
 
setName(String) - Method in class org.gbif.api.model.collections.request.SearchRequest
 
setName(String) - Method in class org.gbif.api.model.collections.search.CollectionsSearchResponse
 
setName(String) - Method in class org.gbif.api.model.common.search.Facet.Count
Sets the name value of the category/count.
setName(String) - Method in class org.gbif.api.model.occurrence.GadmFeature
 
setName(String) - Method in class org.gbif.api.model.pipelines.PipelineStep.MetricInfo
 
setName(String) - Method in class org.gbif.api.model.registry.eml.Collection
 
setName(String) - Method in class org.gbif.api.model.registry.eml.DataDescription
 
setName(String) - Method in class org.gbif.api.model.registry.MachineTag
 
setName(String) - Method in class org.gbif.api.model.registry.search.collections.KeyCodeNameResult
 
setName(String) - Method in class org.gbif.api.v2.RankedName
 
setNameForNewInstitution(String) - Method in class org.gbif.api.model.collections.merge.ConvertToCollectionParams
 
setNameForNewInstitutionForConvertedCollection(String) - Method in class org.gbif.api.model.collections.suggestions.InstitutionChangeSuggestion
 
setNameKey(Integer) - Method in class org.gbif.api.model.checklistbank.NameUsage
 
setNameKey(Integer) - Method in class org.gbif.api.model.checklistbank.search.NameUsageSearchResult
 
setNameKey(Integer) - Method in class org.gbif.api.model.checklistbank.search.NameUsageSuggestResult
 
setNamespace(String) - Method in class org.gbif.api.model.registry.MachineTag
 
setNameType(NameType) - Method in class org.gbif.api.model.checklistbank.NameUsage
 
setNameType(NameType) - Method in class org.gbif.api.model.checklistbank.search.NameUsageSearchResult
 
setNameUsagesCount(Integer) - Method in class org.gbif.api.model.registry.search.DatasetSearchResult
 
setNetworkKeys(List<UUID>) - Method in class org.gbif.api.model.occurrence.VerbatimOccurrence
 
setNetworkKeys(List<UUID>) - Method in class org.gbif.api.model.registry.Dataset
 
setNetworkKeys(List<UUID>) - Method in class org.gbif.api.model.registry.search.DatasetSearchResult
 
setNextSteps(List<WorkflowStep>) - Method in class org.gbif.api.model.pipelines.WorkflowStep
 
setNomenclaturalStatus(Set<NomenclaturalStatus>) - Method in class org.gbif.api.model.checklistbank.NameUsage
 
setNomenclaturalStatus(List<NomenclaturalStatus>) - Method in class org.gbif.api.model.checklistbank.search.NameUsageSearchResult
 
setNomenclature(NameUsageMatch2.Nomenclature) - Method in class org.gbif.api.v2.NameUsageMatch2
 
setNomStatus(String) - Method in class org.gbif.api.model.checklistbank.ParsedName
 
setNote(String) - Method in class org.gbif.api.model.checklistbank.NameUsageMatch
 
setNote(String) - Method in class org.gbif.api.v2.NameUsageMatch2.Diagnostics
 
setNotes(String) - Method in class org.gbif.api.model.collections.Collection
 
setNotes(String) - Method in class org.gbif.api.model.collections.Contact
 
setNotho(NamePart) - Method in class org.gbif.api.model.checklistbank.ParsedName
 
setNotificationAddresses(Set<String>) - Method in class org.gbif.api.model.occurrence.DownloadRequest
 
setNotificationAddressesAsString(String) - Method in class org.gbif.api.model.occurrence.DownloadRequest
Sets the notificationAddresses using a single String value that is split by ','.
setNotInCountries(List<String>) - Method in class org.gbif.api.model.collections.duplicates.DuplicatesRequest
 
setNotInInstitutions(List<UUID>) - Method in class org.gbif.api.model.collections.duplicates.DuplicatesRequest
 
setNubCoveragePct(int) - Method in class org.gbif.api.model.checklistbank.DatasetMetrics
 
setNubKey(Integer) - Method in class org.gbif.api.model.checklistbank.NameUsage
 
setNubKey(Integer) - Method in class org.gbif.api.model.checklistbank.search.NameUsageSearchResult
 
setNubKey(Integer) - Method in class org.gbif.api.model.checklistbank.search.NameUsageSuggestResult
 
setNubMatchingCount(int) - Method in class org.gbif.api.model.checklistbank.DatasetMetrics
 
setNumberDatasets(Long) - Method in class org.gbif.api.model.occurrence.Download
 
setNumberDownloads(Long) - Method in class org.gbif.api.model.occurrence.DownloadStatistics
 
setNumberOrganizations(Long) - Method in class org.gbif.api.model.occurrence.Download
 
setNumberPublishingCountries(Long) - Method in class org.gbif.api.model.occurrence.Download
 
setNumberRecords(Long) - Method in class org.gbif.api.model.pipelines.PipelineStep
 
setNumberRecords(long) - Method in class org.gbif.api.model.registry.DatasetOccurrenceDownloadUsage
 
setNumberSpecimens(Integer) - Method in class org.gbif.api.model.collections.Collection
 
setNumberSpecimens(Integer) - Method in class org.gbif.api.model.collections.Institution
 
setNumberSpecimens(String) - Method in class org.gbif.api.model.collections.request.SearchRequest
 
setNumChildren(int) - Method in class org.gbif.api.model.checklistbank.NameUsageMetrics
 
setNumClass(int) - Method in class org.gbif.api.model.checklistbank.NameUsageMetrics
 
setNumConstituents(int) - Method in class org.gbif.api.model.registry.Dataset
Not persisted in the database table, but calculated on the fly.
setNumConstituents(int) - Method in class org.gbif.api.model.registry.Network
 
setNumDescendants(int) - Method in class org.gbif.api.model.checklistbank.NameUsage
 
setNumDescendants(int) - Method in class org.gbif.api.model.checklistbank.NameUsageMetrics
 
setNumDescendants(int) - Method in class org.gbif.api.model.checklistbank.search.NameUsageSearchResult
 
setNumFamily(int) - Method in class org.gbif.api.model.checklistbank.NameUsageMetrics
 
setNumFound(int) - Method in class org.gbif.api.model.common.search.SpellCheckResponse.Suggestion
Sets the number of documents found for this suggestion.
setNumGenus(int) - Method in class org.gbif.api.model.checklistbank.NameUsageMetrics
 
setNumOccurrences(long) - Method in class org.gbif.api.model.checklistbank.search.NameUsageSearchResult
 
setNumOrder(int) - Method in class org.gbif.api.model.checklistbank.NameUsageMetrics
 
setNumPhylum(int) - Method in class org.gbif.api.model.checklistbank.NameUsageMetrics
 
setNumPublishedDatasets(int) - Method in class org.gbif.api.model.registry.Organization
 
setNumSpecies(int) - Method in class org.gbif.api.model.checklistbank.NameUsageMetrics
 
setNumSubgenus(int) - Method in class org.gbif.api.model.checklistbank.NameUsageMetrics
 
setNumSynonyms(int) - Method in class org.gbif.api.model.checklistbank.NameUsageMetrics
 
setOccurrenceCount(Integer) - Method in class org.gbif.api.model.collections.Collection
 
setOccurrenceCount(Integer) - Method in class org.gbif.api.model.collections.Institution
 
setOccurrenceCount(String) - Method in class org.gbif.api.model.collections.request.SearchRequest
 
setOccurrenceId(String) - Method in class org.gbif.api.model.checklistbank.TypeSpecimen
Deprecated.
setOccurrenceId(long) - Method in class org.gbif.api.model.occurrence.OccurrenceRelation
 
setOccurrenceMappings(List<OccurrenceMapping>) - Method in class org.gbif.api.model.collections.Collection
 
setOccurrenceMappings(List<OccurrenceMapping>) - Method in class org.gbif.api.model.collections.Institution
 
setOccurrenceMappings(List<OccurrenceMapping>) - Method in interface org.gbif.api.model.collections.OccurrenceMappeable
 
setOccurrenceStatus(OccurrenceStatus) - Method in class org.gbif.api.model.occurrence.Occurrence
 
setOffset(long) - Method in class org.gbif.api.model.common.paging.PageableBase
 
setOrder(String) - Method in class org.gbif.api.model.checklistbank.NameUsage
 
setOrder(String) - Method in class org.gbif.api.model.checklistbank.NameUsageMatch
 
setOrder(String) - Method in class org.gbif.api.model.checklistbank.search.NameUsageSearchResult
 
setOrder(String) - Method in class org.gbif.api.model.checklistbank.search.NameUsageSuggestResult
 
setOrder(String) - Method in interface org.gbif.api.model.common.LinneanClassification
 
setOrder(String) - Method in class org.gbif.api.model.occurrence.Occurrence
 
setOrderKey(Integer) - Method in class org.gbif.api.model.checklistbank.NameUsage
 
setOrderKey(Integer) - Method in class org.gbif.api.model.checklistbank.NameUsageMatch
 
setOrderKey(Integer) - Method in class org.gbif.api.model.checklistbank.search.NameUsageSearchResult
 
setOrderKey(Integer) - Method in class org.gbif.api.model.checklistbank.search.NameUsageSuggestResult
 
setOrderKey(Integer) - Method in interface org.gbif.api.model.common.LinneanClassificationKeys
 
setOrderKey(Integer) - Method in class org.gbif.api.model.occurrence.Occurrence
 
setOrganismQuantity(Double) - Method in class org.gbif.api.model.occurrence.Occurrence
 
setOrganismQuantityType(String) - Method in class org.gbif.api.model.occurrence.Occurrence
 
setOrganization(String) - Method in interface org.gbif.api.model.registry.Address
 
setOrganization(String) - Method in class org.gbif.api.model.registry.Contact
 
setOrganization(String) - Method in class org.gbif.api.model.registry.Network
Alias for the network title
setOrganization(String) - Method in class org.gbif.api.model.registry.Node
 
setOrganization(String) - Method in class org.gbif.api.model.registry.Organization
 
setOrganizationKey(UUID) - Method in class org.gbif.api.model.collections.InstitutionImportParams
 
setOrganizationKey(UUID) - Method in class org.gbif.api.model.registry.Installation
 
setOrigin(Origin) - Method in class org.gbif.api.model.checklistbank.NameUsage
 
setOrigin(Origin) - Method in class org.gbif.api.model.checklistbank.search.NameUsageSearchResult
 
setOtherCatalogNumbers(String) - Method in class org.gbif.api.model.occurrence.Occurrence
 
setOtherCount(Map<String, Integer>) - Method in class org.gbif.api.model.checklistbank.DatasetMetrics
 
setOutdated(boolean) - Method in class org.gbif.api.model.collections.suggestions.Change
 
setOverridable(boolean) - Method in class org.gbif.api.model.collections.SourceableField.Source
 
setOverwritten(boolean) - Method in class org.gbif.api.model.collections.suggestions.Change
 
setOwnerInstitutionCode(String) - Method in class org.gbif.api.model.collections.lookup.LookupParams
 
setPage(Pageable) - Method in class org.gbif.api.model.registry.search.RequestSearchParams
 
setPagesCrawled(long) - Method in class org.gbif.api.model.crawler.DatasetProcessStatus
 
setPagesFragmentedError(long) - Method in class org.gbif.api.model.crawler.DatasetProcessStatus
 
setPagesFragmentedSuccessful(long) - Method in class org.gbif.api.model.crawler.DatasetProcessStatus
 
setParameter(T) - Method in class org.gbif.api.model.common.messaging.Request
 
setParameters(Map<P, Set<String>>) - Method in class org.gbif.api.model.common.search.SearchRequest
Sets the list of parameters.
setParent(String) - Method in class org.gbif.api.model.checklistbank.NameUsage
 
setParent(String) - Method in class org.gbif.api.model.checklistbank.search.NameUsageSearchResult
 
setParent(String) - Method in class org.gbif.api.model.checklistbank.search.NameUsageSuggestResult
 
setParentCode(String) - Method in class org.gbif.api.model.collections.OccurrenceMapping
 
setParentDatasetKey(UUID) - Method in class org.gbif.api.model.registry.Dataset
Persisted in the database table.
setParentIdentifier(String) - Method in class org.gbif.api.model.registry.eml.Collection
 
setParentKey(Integer) - Method in class org.gbif.api.model.checklistbank.NameUsage
 
setParentKey(Integer) - Method in class org.gbif.api.model.checklistbank.search.NameUsageSearchResult
 
setParentKey(Integer) - Method in class org.gbif.api.model.checklistbank.search.NameUsageSuggestResult
 
setParsed(boolean) - Method in class org.gbif.api.model.checklistbank.ParsedName
 
setParsedPartially(boolean) - Method in class org.gbif.api.model.checklistbank.ParsedName
 
setParticipantSince(Integer) - Method in class org.gbif.api.model.registry.Node
 
setParticipantTitle(String) - Method in class org.gbif.api.model.registry.Node
 
setParticipationStatus(ParticipationStatus) - Method in class org.gbif.api.model.registry.Node
 
setPassword(String) - Method in class org.gbif.api.model.registry.Installation
 
setPassword(String) - Method in class org.gbif.api.model.registry.Organization
 
setPasswordHash(String) - Method in class org.gbif.api.model.common.GbifUser
 
setPasswordHash(String) - Method in class org.gbif.api.model.common.User
Deprecated.
 
setPathway(String) - Method in class org.gbif.api.model.occurrence.Occurrence
 
setPeriod(String) - Method in class org.gbif.api.model.registry.eml.temporal.VerbatimTimePeriod
 
setPersonalCollection(boolean) - Method in class org.gbif.api.model.collections.Collection
 
setPersonalCollection(Boolean) - Method in class org.gbif.api.model.collections.request.CollectionSearchRequest
 
setPhone(List<String>) - Method in class org.gbif.api.model.collections.Collection
 
setPhone(List<String>) - Method in interface org.gbif.api.model.collections.CollectionEntity
 
setPhone(List<String>) - Method in class org.gbif.api.model.collections.Contact
 
setPhone(List<String>) - Method in class org.gbif.api.model.collections.Institution
 
setPhone(List<String>) - Method in interface org.gbif.api.model.registry.Address
 
setPhone(List<String>) - Method in class org.gbif.api.model.registry.Contact
 
setPhone(List<String>) - Method in class org.gbif.api.model.registry.Network
 
setPhone(List<String>) - Method in class org.gbif.api.model.registry.Node
 
setPhone(List<String>) - Method in class org.gbif.api.model.registry.Organization
 
setPhylum(String) - Method in class org.gbif.api.model.checklistbank.NameUsage
 
setPhylum(String) - Method in class org.gbif.api.model.checklistbank.NameUsageMatch
 
setPhylum(String) - Method in class org.gbif.api.model.checklistbank.search.NameUsageSearchResult
 
setPhylum(String) - Method in class org.gbif.api.model.checklistbank.search.NameUsageSuggestResult
 
setPhylum(String) - Method in interface org.gbif.api.model.common.LinneanClassification
 
setPhylum(String) - Method in class org.gbif.api.model.occurrence.Occurrence
 
setPhylumKey(Integer) - Method in class org.gbif.api.model.checklistbank.NameUsage
 
setPhylumKey(Integer) - Method in class org.gbif.api.model.checklistbank.NameUsageMatch
 
setPhylumKey(Integer) - Method in class org.gbif.api.model.checklistbank.search.NameUsageSearchResult
 
setPhylumKey(Integer) - Method in class org.gbif.api.model.checklistbank.search.NameUsageSuggestResult
 
setPhylumKey(Integer) - Method in interface org.gbif.api.model.common.LinneanClassificationKeys
 
setPhylumKey(Integer) - Method in class org.gbif.api.model.occurrence.Occurrence
 
setPhysicalCity(String) - Method in class org.gbif.api.model.collections.duplicates.Duplicate
 
setPhysicalCountry(Country) - Method in class org.gbif.api.model.collections.duplicates.Duplicate
 
setPipelineExecutions(Set<PipelineExecution>) - Method in class org.gbif.api.model.pipelines.IngestionProcess
 
setPipelinesVersion(String) - Method in class org.gbif.api.model.pipelines.PipelineStep
 
setPipelinesVersion(String) - Method in class org.gbif.api.model.pipelines.ws.SearchResult
 
setPlural(Boolean) - Method in class org.gbif.api.model.checklistbank.VernacularName
 
setPoints(List<Point>) - Method in class org.gbif.api.model.registry.eml.geospatial.Polygon
 
setPosition(List<String>) - Method in class org.gbif.api.model.collections.Contact
 
setPosition(List<String>) - Method in class org.gbif.api.model.registry.Contact
 
setPostalCode(String) - Method in class org.gbif.api.model.collections.Address
 
setPostalCode(String) - Method in class org.gbif.api.model.collections.Contact
 
setPostalCode(String) - Method in interface org.gbif.api.model.registry.Address
 
setPostalCode(String) - Method in class org.gbif.api.model.registry.Contact
 
setPostalCode(String) - Method in class org.gbif.api.model.registry.Network
 
setPostalCode(String) - Method in class org.gbif.api.model.registry.Node
 
setPostalCode(String) - Method in class org.gbif.api.model.registry.Organization
 
setPredicate(Predicate) - Method in class org.gbif.api.model.occurrence.PredicateDownloadRequest
 
setPredicate(Predicate) - Method in class org.gbif.api.model.occurrence.search.OccurrencePredicateSearchRequest
 
setPreferred(Boolean) - Method in class org.gbif.api.model.checklistbank.VernacularName
 
setPrefix(String) - Method in class org.gbif.api.model.common.DOI
 
setPreparations(String) - Method in class org.gbif.api.model.occurrence.Occurrence
 
setPreservationTypes(List<PreservationType>) - Method in class org.gbif.api.model.collections.Collection
 
setPreservationTypes(List<PreservationType>) - Method in class org.gbif.api.model.collections.request.CollectionSearchRequest
 
setPrevious(Object) - Method in class org.gbif.api.model.collections.suggestions.Change
 
setPrimary(boolean) - Method in class org.gbif.api.model.collections.Contact
 
setPrimary(boolean) - Method in class org.gbif.api.model.registry.Contact
 
setProcessingErrorType(ProcessingErrorType) - Method in class org.gbif.api.model.metrics.RecordError
Deprecated.
 
setProcessStateChecklist(ProcessState) - Method in class org.gbif.api.model.crawler.DatasetProcessStatus
 
setProcessStateOccurrence(ProcessState) - Method in class org.gbif.api.model.crawler.DatasetProcessStatus
 
setProcessStateSample(ProcessState) - Method in class org.gbif.api.model.crawler.DatasetProcessStatus
 
setProgrammeAcronym(String) - Method in class org.gbif.api.model.occurrence.VerbatimOccurrence
 
setProject(Project) - Method in class org.gbif.api.model.registry.Dataset
 
setProjectId(String) - Method in class org.gbif.api.model.occurrence.VerbatimOccurrence
 
setProjectIdentifier(String) - Method in class org.gbif.api.model.registry.search.DatasetSearchResult
 
setProParteKey(Integer) - Method in class org.gbif.api.model.checklistbank.NameUsage
Sets the pro parte usage key.
setProposed(Date) - Method in class org.gbif.api.model.collections.suggestions.BaseChangeSuggestion
 
setProposed(Date) - Method in interface org.gbif.api.model.collections.suggestions.ChangeSuggestion
 
setProposedBy(String) - Method in class org.gbif.api.model.collections.suggestions.BaseChangeSuggestion
 
setProposedBy(String) - Method in interface org.gbif.api.model.collections.suggestions.ChangeSuggestion
 
setProposerEmail(String) - Method in class org.gbif.api.model.collections.suggestions.BaseChangeSuggestion
 
setProposerEmail(String) - Method in interface org.gbif.api.model.collections.suggestions.ChangeSuggestion
 
setProtocol(EndpointType) - Method in class org.gbif.api.model.occurrence.VerbatimOccurrence
 
setProvince(String) - Method in class org.gbif.api.model.collections.Address
 
setProvince(String) - Method in class org.gbif.api.model.collections.Contact
 
setProvince(String) - Method in interface org.gbif.api.model.registry.Address
 
setProvince(String) - Method in class org.gbif.api.model.registry.Contact
 
setProvince(String) - Method in class org.gbif.api.model.registry.Network
 
setProvince(String) - Method in class org.gbif.api.model.registry.Node
 
setProvince(String) - Method in class org.gbif.api.model.registry.Organization
 
setPubDate(Date) - Method in class org.gbif.api.model.registry.Dataset
 
setPublishedByGbifRegion(String) - Method in class org.gbif.api.model.occurrence.VerbatimOccurrence
 
setPublishedIn(String) - Method in class org.gbif.api.model.checklistbank.NameUsage
 
setPublishedIn(String) - Method in class org.gbif.api.model.checklistbank.search.NameUsageSearchResult
 
setPublisher(String) - Method in class org.gbif.api.model.common.MediaObject
 
setPublisherTitle(String) - Method in class org.gbif.api.model.registry.search.DatasetSearchResult
 
setPublishingCountry(Country) - Method in class org.gbif.api.model.occurrence.VerbatimOccurrence
 
setPublishingCountry(Country) - Method in class org.gbif.api.model.registry.search.DatasetSearchResult
 
setPublishingCountryCode(String) - Method in class org.gbif.api.model.registry.DatasetOccurrenceDownloadUsage
 
setPublishingOrganizationKey(UUID) - Method in class org.gbif.api.model.registry.Dataset
Persisted in the database table.
setPublishingOrganizationKey(UUID) - Method in class org.gbif.api.model.registry.search.DatasetSearchResult
 
setPublishingOrganizationTitle(String) - Method in class org.gbif.api.model.registry.search.DatasetSearchResult
 
setPublishingOrgKey(UUID) - Method in class org.gbif.api.model.occurrence.VerbatimOccurrence
 
setPurpose(String) - Method in class org.gbif.api.model.registry.Dataset
 
setQ(String) - Method in class org.gbif.api.model.collections.request.SearchRequest
 
setQ(String) - Method in class org.gbif.api.model.common.search.SearchRequest
 
setQFields(Set<SearchRequest.QueryField>) - Method in class org.gbif.api.model.common.search.SearchRequest
 
setQualityControl(String) - Method in class org.gbif.api.model.registry.eml.SamplingDescription
 
setRank(Rank) - Method in class org.gbif.api.model.checklistbank.NameUsage
 
setRank(Rank) - Method in class org.gbif.api.model.checklistbank.NameUsageMatch
 
setRank(Rank) - Method in class org.gbif.api.model.checklistbank.ParsedName
 
setRank(Rank) - Method in class org.gbif.api.model.checklistbank.search.NameUsageSearchResult
 
setRank(Rank) - Method in class org.gbif.api.model.checklistbank.search.NameUsageSuggestResult
 
setRank(InterpretedEnum<String, Rank>) - Method in class org.gbif.api.model.registry.eml.TaxonomicCoverage
 
setRank(Rank) - Method in class org.gbif.api.v2.RankedName
 
setRawOccurrencesPersistedError(long) - Method in class org.gbif.api.model.crawler.DatasetProcessStatus
 
setRawOccurrencesPersistedNew(long) - Method in class org.gbif.api.model.crawler.DatasetProcessStatus
 
setRawOccurrencesPersistedUnchanged(long) - Method in class org.gbif.api.model.crawler.DatasetProcessStatus
 
setRawOccurrencesPersistedUpdated(long) - Method in class org.gbif.api.model.crawler.DatasetProcessStatus
 
setReason(String) - Method in enum org.gbif.api.model.common.messaging.Response.StatusCode
 
setReasons(Set<Match.Reason>) - Method in class org.gbif.api.model.collections.lookup.Match
 
setRecordCount(Integer) - Method in class org.gbif.api.model.registry.search.DatasetSearchResult
 
setRecordedBy(String) - Method in class org.gbif.api.model.checklistbank.TypeSpecimen
Deprecated.
setRecordedBy(String) - Method in class org.gbif.api.model.occurrence.Occurrence
 
setRecordedByIds(List<AgentIdentifier>) - Method in class org.gbif.api.model.occurrence.Occurrence
 
setRecordId(long) - Method in class org.gbif.api.model.metrics.RecordError
Deprecated.
 
setReferenceList(List<Reference>) - Method in class org.gbif.api.model.checklistbank.NameUsageContainer
 
setReferences(URI) - Method in class org.gbif.api.model.checklistbank.NameUsage
 
setReferences(URI) - Method in class org.gbif.api.model.common.MediaObject
 
setReferences(URI) - Method in class org.gbif.api.model.occurrence.Occurrence
 
setRelatedOccurrenceId(long) - Method in class org.gbif.api.model.occurrence.OccurrenceRelation
 
setRelatedResponses(List<Response<R>>) - Method in class org.gbif.api.model.common.messaging.ResponseChain
 
setRelations(List<OccurrenceRelation>) - Method in class org.gbif.api.model.occurrence.Occurrence
 
setRelativeOrganismQuantity(Double) - Method in class org.gbif.api.model.occurrence.Occurrence
 
setRemarks(String) - Method in class org.gbif.api.model.checklistbank.Distribution
 
setRemarks(String) - Method in class org.gbif.api.model.checklistbank.NameUsage
 
setRemarks(String) - Method in class org.gbif.api.model.checklistbank.ParsedName
 
setRemarks(String) - Method in class org.gbif.api.model.checklistbank.Reference
 
setRemarks(String) - Method in class org.gbif.api.model.occurrence.MeasurementOrFact
 
setRemarks(String) - Method in class org.gbif.api.model.occurrence.OccurrenceRelation
 
setRemarks(String) - Method in class org.gbif.api.model.pipelines.PipelineExecution
 
setReplacedBy(UUID) - Method in class org.gbif.api.model.collections.Collection
 
setReplacedBy(UUID) - Method in interface org.gbif.api.model.collections.CollectionEntity
 
setReplacedBy(UUID) - Method in class org.gbif.api.model.collections.Institution
 
setReplacedBy(UUID) - Method in class org.gbif.api.model.collections.request.SearchRequest
 
setReplacementEntityKey(UUID) - Method in class org.gbif.api.model.collections.merge.MergeParams
 
setRequest(DownloadRequest) - Method in class org.gbif.api.model.occurrence.Download
 
setRerunReason(String) - Method in class org.gbif.api.model.pipelines.PipelineExecution
 
setRerunReason(String) - Method in class org.gbif.api.model.pipelines.ws.SearchResult
 
setResponseStatus(RunPipelineResponse.ResponseStatus) - Method in class org.gbif.api.model.pipelines.RunPipelineResponse.Builder
 
setResult(MetasyncResult) - Method in class org.gbif.api.model.registry.metasync.MetasyncHistory
 
setResults(List<T>) - Method in class org.gbif.api.model.common.paging.PagingResponse
Sets the list of results for the response.
setRights(String) - Method in class org.gbif.api.model.registry.Dataset
Persisted in the database table.
setRightsHolder(String) - Method in class org.gbif.api.model.common.MediaObject
 
setRoles(Set<UserRole>) - Method in class org.gbif.api.model.common.AbstractGbifUser
 
setRoles(Set<UserRole>) - Method in class org.gbif.api.model.common.User
Deprecated.
 
setRoles(Set<ContactType>) - Method in class org.gbif.api.model.registry.CitationContact
 
setRootException(Throwable) - Method in class org.gbif.api.model.common.messaging.Response
Sets the root exception when is error response.
setRunner(StepRunner) - Method in class org.gbif.api.model.pipelines.PipelineStep
 
setSameCity(Boolean) - Method in class org.gbif.api.model.collections.duplicates.DuplicatesRequest
 
setSameCode(Boolean) - Method in class org.gbif.api.model.collections.duplicates.DuplicatesRequest
 
setSameCountry(Boolean) - Method in class org.gbif.api.model.collections.duplicates.DuplicatesRequest
 
setSameFuzzyName(Boolean) - Method in class org.gbif.api.model.collections.duplicates.DuplicatesRequest
 
setSameInstitution(Boolean) - Method in class org.gbif.api.model.collections.duplicates.DuplicatesRequest
 
setSameName(Boolean) - Method in class org.gbif.api.model.collections.duplicates.DuplicatesRequest
 
setSampleSizeUnit(String) - Method in class org.gbif.api.model.occurrence.Occurrence
 
setSampleSizeValue(Double) - Method in class org.gbif.api.model.occurrence.Occurrence
 
setSampling(String) - Method in class org.gbif.api.model.registry.eml.SamplingDescription
 
setSamplingDescription(SamplingDescription) - Method in class org.gbif.api.model.registry.Dataset
 
setSamplingProtocol(String) - Method in class org.gbif.api.model.occurrence.Occurrence
 
setScientificName(String) - Method in class org.gbif.api.model.checklistbank.NameUsage
 
setScientificName(String) - Method in class org.gbif.api.model.checklistbank.NameUsageMatch
 
setScientificName(String) - Method in class org.gbif.api.model.checklistbank.ParsedName
 
setScientificName(String) - Method in class org.gbif.api.model.checklistbank.search.NameUsageSearchResult
 
setScientificName(String) - Method in class org.gbif.api.model.checklistbank.search.NameUsageSuggestResult
 
setScientificName(String) - Method in class org.gbif.api.model.checklistbank.TypeSpecimen
 
setScientificName(String) - Method in class org.gbif.api.model.occurrence.Occurrence
 
setScientificName(String) - Method in class org.gbif.api.model.registry.eml.TaxonomicCoverage
 
setSelfLink(URI) - Method in class org.gbif.api.model.collections.lookup.BaseEntityMatched
 
setSendNotification(boolean) - Method in class org.gbif.api.model.occurrence.DownloadRequest
This parameter determines if the requested download must be notified to the created once it's ready.
setSensu(String) - Method in class org.gbif.api.model.checklistbank.ParsedName
 
setSettings(Map<String, String>) - Method in class org.gbif.api.model.common.AbstractGbifUser
Sets the settings object, setting an empty map if null is provided.
setSettings(Map<String, String>) - Method in class org.gbif.api.model.common.User
Deprecated.
Sets the settings object, setting an empty map if null is provided.
setSex(Sex) - Method in class org.gbif.api.model.checklistbank.VernacularName
 
setSex(Sex) - Method in class org.gbif.api.model.occurrence.Occurrence
 
setShuffle(String) - Method in class org.gbif.api.model.occurrence.search.OccurrenceSearchRequest
 
setSize(long) - Method in class org.gbif.api.model.occurrence.Download
 
setSizeInMillimeter(Integer) - Method in class org.gbif.api.model.checklistbank.SpeciesProfile
 
setSnippet(String) - Method in class org.gbif.api.model.collections.search.CollectionsSearchResponse.Match
 
setSortBy(CollectionsSortField) - Method in class org.gbif.api.model.collections.request.SearchRequest
 
setSortOrder(SortOrder) - Method in class org.gbif.api.model.collections.request.SearchRequest
 
setSource(String) - Method in class org.gbif.api.model.checklistbank.Description
 
setSource(String) - Method in class org.gbif.api.model.checklistbank.Distribution
 
setSource(String) - Method in interface org.gbif.api.model.checklistbank.NameUsageExtension
 
setSource(String) - Method in class org.gbif.api.model.checklistbank.Reference
 
setSource(String) - Method in class org.gbif.api.model.checklistbank.SpeciesProfile
 
setSource(String) - Method in class org.gbif.api.model.checklistbank.TypeSpecimen
 
setSource(String) - Method in class org.gbif.api.model.checklistbank.VernacularName
 
setSource(Source) - Method in class org.gbif.api.model.collections.MasterSourceMetadata
 
setSource(String) - Method in class org.gbif.api.model.common.MediaObject
 
setSource(String) - Method in class org.gbif.api.model.occurrence.Download
 
setSource(String) - Method in class org.gbif.api.v2.NameUsageMatch2.Nomenclature
 
setSourceableParts(List<String>) - Method in class org.gbif.api.model.collections.SourceableField.Source
 
setSourceId(String) - Method in class org.gbif.api.model.collections.MasterSourceMetadata
 
setSources(List<SourceableField.Source>) - Method in class org.gbif.api.model.collections.SourceableField
 
setSourceTaxonKey(Integer) - Method in class org.gbif.api.model.checklistbank.Description
 
setSourceTaxonKey(Integer) - Method in class org.gbif.api.model.checklistbank.Distribution
 
setSourceTaxonKey(Integer) - Method in class org.gbif.api.model.checklistbank.NameUsage
 
setSourceTaxonKey(Integer) - Method in interface org.gbif.api.model.checklistbank.NameUsageExtension
 
setSourceTaxonKey(Integer) - Method in class org.gbif.api.model.checklistbank.NameUsageMediaObject
 
setSourceTaxonKey(Integer) - Method in class org.gbif.api.model.checklistbank.Reference
 
setSourceTaxonKey(Integer) - Method in class org.gbif.api.model.checklistbank.SpeciesProfile
 
setSourceTaxonKey(Integer) - Method in class org.gbif.api.model.checklistbank.TypeSpecimen
 
setSourceTaxonKey(Integer) - Method in class org.gbif.api.model.checklistbank.VernacularName
 
setSpecies(String) - Method in class org.gbif.api.model.checklistbank.NameUsage
 
setSpecies(String) - Method in class org.gbif.api.model.checklistbank.NameUsageMatch
 
setSpecies(String) - Method in class org.gbif.api.model.checklistbank.search.NameUsageSearchResult
 
setSpecies(String) - Method in class org.gbif.api.model.checklistbank.search.NameUsageSuggestResult
 
setSpecies(String) - Method in interface org.gbif.api.model.common.LinneanClassification
 
setSpecies(String) - Method in class org.gbif.api.model.occurrence.Occurrence
 
setSpeciesKey(Integer) - Method in class org.gbif.api.model.checklistbank.NameUsage
 
setSpeciesKey(Integer) - Method in class org.gbif.api.model.checklistbank.NameUsageMatch
 
setSpeciesKey(Integer) - Method in class org.gbif.api.model.checklistbank.search.NameUsageSearchResult
 
setSpeciesKey(Integer) - Method in class org.gbif.api.model.checklistbank.search.NameUsageSuggestResult
 
setSpeciesKey(Integer) - Method in interface org.gbif.api.model.common.LinneanClassificationKeys
 
setSpeciesKey(Integer) - Method in class org.gbif.api.model.occurrence.Occurrence
 
setSpeciesProfiles(List<SpeciesProfile>) - Method in class org.gbif.api.model.checklistbank.NameUsageContainer
 
setSpecificEpithet(String) - Method in class org.gbif.api.model.checklistbank.ParsedName
 
setSpecificEpithet(String) - Method in class org.gbif.api.model.occurrence.Occurrence
 
setSpecimenPreservationMethod(PreservationMethodType) - Method in class org.gbif.api.model.registry.eml.Collection
 
setSpellCheck(boolean) - Method in class org.gbif.api.model.common.search.SearchRequest
 
setSpellCheckCount(int) - Method in class org.gbif.api.model.common.search.SearchRequest
 
setSpellCheckResponse(SpellCheckResponse) - Method in class org.gbif.api.model.common.search.SearchResponse
Sets the spellcheck response.
setSql(String) - Method in class org.gbif.api.model.occurrence.SqlDownloadRequest
This parameter when present provides the SQL query for custom download
setStart(Date) - Method in class org.gbif.api.model.registry.eml.temporal.DateRange
 
setStartDayOfYear(Integer) - Method in class org.gbif.api.model.checklistbank.Distribution
 
setStartDayOfYear(Integer) - Method in class org.gbif.api.model.occurrence.Occurrence
 
setStarted(LocalDateTime) - Method in class org.gbif.api.model.pipelines.PipelineStep
 
setStartedCrawling(Date) - Method in class org.gbif.api.model.crawler.DatasetProcessStatus
 
setState(PipelineStep.Status) - Method in class org.gbif.api.model.pipelines.PipelineStep
 
setStateProvince(String) - Method in class org.gbif.api.model.occurrence.Occurrence
 
setStatus(DistributionStatus) - Method in class org.gbif.api.model.checklistbank.Distribution
 
setStatus(TaxonomicStatus) - Method in class org.gbif.api.model.checklistbank.NameUsageMatch
 
setStatus(TaxonomicStatus) - Method in class org.gbif.api.model.checklistbank.search.NameUsageSuggestResult
 
setStatus(Match.Status) - Method in class org.gbif.api.model.collections.lookup.Match
 
setStatus(Status) - Method in class org.gbif.api.model.collections.suggestions.BaseChangeSuggestion
 
setStatus(Status) - Method in interface org.gbif.api.model.collections.suggestions.ChangeSuggestion
 
setStatus(Response.Status) - Method in class org.gbif.api.model.common.messaging.Response
 
setStatus(Download.Status) - Method in class org.gbif.api.model.occurrence.Download
 
setStatus(TaxonomicStatus) - Method in class org.gbif.api.v2.NameUsageMatch2.Diagnostics
 
setStatusCode(Integer) - Method in class org.gbif.api.model.common.messaging.Response
 
setStepFinished(LocalDateTime) - Method in class org.gbif.api.model.pipelines.ws.SearchResult
 
setSteps(Set<PipelineStep>) - Method in class org.gbif.api.model.pipelines.PipelineExecution
 
setSteps(Set<StepType>) - Method in class org.gbif.api.model.pipelines.RunPipelineResponse.Builder
 
setStepsFailed(Set<StepType>) - Method in class org.gbif.api.model.pipelines.RunPipelineResponse.Builder
 
setStepStarted(LocalDateTime) - Method in class org.gbif.api.model.pipelines.ws.SearchResult
 
setStepState(String) - Method in class org.gbif.api.model.pipelines.ws.SearchResult
 
setStepsToRun(Set<StepType>) - Method in class org.gbif.api.model.pipelines.PipelineExecution
 
setStepType(StepType) - Method in class org.gbif.api.model.pipelines.WorkflowStep
 
setStepType(String) - Method in class org.gbif.api.model.pipelines.ws.SearchResult
 
setStrain(String) - Method in class org.gbif.api.model.checklistbank.ParsedName
 
setStudyAreaDescription(String) - Method in class org.gbif.api.model.registry.eml.Project
 
setStudyExtent(String) - Method in class org.gbif.api.model.registry.eml.SamplingDescription
 
setSubgenus(String) - Method in class org.gbif.api.model.checklistbank.NameUsage
 
setSubgenus(String) - Method in class org.gbif.api.model.checklistbank.NameUsageMatch
 
setSubgenus(String) - Method in class org.gbif.api.model.checklistbank.search.NameUsageSearchResult
 
setSubgenus(String) - Method in class org.gbif.api.model.checklistbank.search.NameUsageSuggestResult
 
setSubgenus(String) - Method in interface org.gbif.api.model.common.LinneanClassification
 
setSubgenus(String) - Method in class org.gbif.api.model.occurrence.Occurrence
 
setSubgenusKey(Integer) - Method in class org.gbif.api.model.checklistbank.NameUsage
 
setSubgenusKey(Integer) - Method in class org.gbif.api.model.checklistbank.NameUsageMatch
 
setSubgenusKey(Integer) - Method in class org.gbif.api.model.checklistbank.search.NameUsageSearchResult
 
setSubgenusKey(Integer) - Method in class org.gbif.api.model.checklistbank.search.NameUsageSuggestResult
 
setSubgenusKey(Integer) - Method in interface org.gbif.api.model.common.LinneanClassificationKeys
 
setSubgenusKey(Integer) - Method in class org.gbif.api.model.occurrence.Occurrence
 
setSubtype(DatasetSubtype) - Method in class org.gbif.api.model.registry.Dataset
Persisted in the database table.
setSubtype(DatasetSubtype) - Method in class org.gbif.api.model.registry.search.DatasetSearchResult
 
setSubtype(DatasetSubtype) - Method in class org.gbif.api.model.registry.search.DatasetSuggestResult
 
setSuffix(String) - Method in class org.gbif.api.model.common.DOI
 
setSuggested(Object) - Method in class org.gbif.api.model.collections.suggestions.Change
 
setSuggestedEntity(T) - Method in class org.gbif.api.model.collections.suggestions.BaseChangeSuggestion
 
setSuggestedEntity(T) - Method in interface org.gbif.api.model.collections.suggestions.ChangeSuggestion
 
setSuggestions(Map<String, SpellCheckResponse.Suggestion>) - Method in class org.gbif.api.model.common.search.SpellCheckResponse
Sets the suggestion map.
setSyncDate(Date) - Method in class org.gbif.api.model.registry.metasync.MetasyncHistory
 
setSynonym(boolean) - Method in class org.gbif.api.v2.NameUsageMatch2
 
setSynonyms(List<NameUsage>) - Method in class org.gbif.api.model.checklistbank.NameUsageContainer
 
setSynonymsCount(int) - Method in class org.gbif.api.model.checklistbank.DatasetMetrics
 
setSystemSettings(Map<String, String>) - Method in class org.gbif.api.model.common.AbstractGbifUser
Sets the settings object, setting an empty map if null is provided.
setTags(List<Tag>) - Method in class org.gbif.api.model.collections.Collection
 
setTags(List<Tag>) - Method in class org.gbif.api.model.collections.Institution
 
setTags(List<Tag>) - Method in class org.gbif.api.model.registry.Dataset
 
setTags(List<Tag>) - Method in class org.gbif.api.model.registry.Installation
 
setTags(List<Tag>) - Method in class org.gbif.api.model.registry.Network
 
setTags(List<Tag>) - Method in class org.gbif.api.model.registry.Node
 
setTags(List<Tag>) - Method in class org.gbif.api.model.registry.Organization
 
setTags(List<Tag>) - Method in interface org.gbif.api.model.registry.Taggable
 
setTaxonID(String) - Method in class org.gbif.api.model.checklistbank.NameUsage
 
setTaxonID(String) - Method in class org.gbif.api.model.checklistbank.search.NameUsageSearchResult
 
setTaxonKey(Integer) - Method in class org.gbif.api.model.checklistbank.Description
 
setTaxonKey(Integer) - Method in class org.gbif.api.model.checklistbank.Distribution
 
setTaxonKey(Integer) - Method in interface org.gbif.api.model.checklistbank.NameUsageExtension
 
setTaxonKey(Integer) - Method in class org.gbif.api.model.checklistbank.NameUsageMediaObject
 
setTaxonKey(Integer) - Method in class org.gbif.api.model.checklistbank.Reference
 
setTaxonKey(Integer) - Method in class org.gbif.api.model.checklistbank.SpeciesProfile
 
setTaxonKey(Integer) - Method in class org.gbif.api.model.checklistbank.TypeSpecimen
 
setTaxonKey(Integer) - Method in class org.gbif.api.model.checklistbank.VernacularName
 
setTaxonKey(Integer) - Method in class org.gbif.api.model.occurrence.Occurrence
 
setTaxonomicCoverage(String) - Method in class org.gbif.api.model.collections.Collection
 
setTaxonomicCoverages(List<TaxonomicCoverages>) - Method in class org.gbif.api.model.registry.Dataset
 
setTaxonomicDescription(String) - Method in class org.gbif.api.model.collections.Institution
 
setTaxonomicExpertise(List<String>) - Method in class org.gbif.api.model.collections.Contact
 
setTaxonomicStatus(TaxonomicStatus) - Method in class org.gbif.api.model.checklistbank.NameUsage
 
setTaxonomicStatus(TaxonomicStatus) - Method in class org.gbif.api.model.checklistbank.search.NameUsageSearchResult
 
setTaxonomicStatus(TaxonomicStatus) - Method in class org.gbif.api.model.occurrence.Occurrence
 
setTaxonRank(Rank) - Method in class org.gbif.api.model.checklistbank.TypeSpecimen
 
setTaxonRank(Rank) - Method in class org.gbif.api.model.occurrence.Occurrence
 
setTemporal(String) - Method in class org.gbif.api.model.checklistbank.Distribution
 
setTemporalCoverages(List<TemporalCoverage>) - Method in class org.gbif.api.model.registry.Dataset
 
setTerrestrial(Boolean) - Method in class org.gbif.api.model.checklistbank.SpeciesProfile
 
setText(String) - Method in class org.gbif.api.model.registry.Citation
 
setThesaurus(String) - Method in class org.gbif.api.model.registry.eml.KeywordCollection
 
setThreatStatus(ThreatStatus) - Method in class org.gbif.api.model.checklistbank.Distribution
 
setThreatStatuses(List<ThreatStatus>) - Method in class org.gbif.api.model.checklistbank.search.NameUsageSearchResult
 
setTitle(String) - Method in class org.gbif.api.model.checklistbank.Reference
Deprecated.
setTitle(String) - Method in class org.gbif.api.model.common.Identifier
 
setTitle(String) - Method in class org.gbif.api.model.common.MediaObject
 
setTitle(String) - Method in class org.gbif.api.model.registry.Dataset
Persisted in the database table.
setTitle(String) - Method in class org.gbif.api.model.registry.eml.Project
 
setTitle(String) - Method in class org.gbif.api.model.registry.Installation
 
setTitle(String) - Method in class org.gbif.api.model.registry.Network
 
setTitle(String) - Method in interface org.gbif.api.model.registry.NetworkEntity
 
setTitle(String) - Method in class org.gbif.api.model.registry.Node
 
setTitle(String) - Method in class org.gbif.api.model.registry.Organization
 
setTitle(String) - Method in class org.gbif.api.model.registry.search.DatasetSearchResult
 
setTitle(String) - Method in class org.gbif.api.model.registry.search.DatasetSuggestResult
 
setTitle(String) - Method in class org.gbif.api.model.registry.search.KeyTitleResult
 
setTo(Temporal) - Method in class org.gbif.api.util.IsoDateInterval
 
setTo(String) - Method in class org.gbif.api.util.IsoDateInterval
 
setTotalRecords(long) - Method in class org.gbif.api.model.occurrence.Download
 
setTotalRecords(Long) - Method in class org.gbif.api.model.occurrence.DownloadStatistics
 
setType(String) - Method in class org.gbif.api.model.checklistbank.Description
 
setType(NameType) - Method in class org.gbif.api.model.checklistbank.ParsedName
 
setType(String) - Method in class org.gbif.api.model.checklistbank.Reference
 
setType(InstitutionType) - Method in class org.gbif.api.model.collections.Institution
 
setType(InstitutionType) - Method in class org.gbif.api.model.collections.request.InstitutionSearchRequest
 
setType(String) - Method in class org.gbif.api.model.collections.search.CollectionsSearchResponse
 
setType(Type) - Method in class org.gbif.api.model.collections.suggestions.BaseChangeSuggestion
 
setType(Type) - Method in interface org.gbif.api.model.collections.suggestions.ChangeSuggestion
 
setType(IdType) - Method in class org.gbif.api.model.collections.UserId
 
setType(IdentifierType) - Method in class org.gbif.api.model.common.Identifier
 
setType(MediaType) - Method in class org.gbif.api.model.common.MediaObject
 
setType(Class<T>) - Method in class org.gbif.api.model.metrics.cube.Dimension
 
setType(AgentIdentifierType) - Method in class org.gbif.api.model.occurrence.AgentIdentifier
 
setType(DownloadType) - Method in class org.gbif.api.model.occurrence.DownloadRequest
Download type: Occurrence or Event.
setType(String) - Method in class org.gbif.api.model.occurrence.MeasurementOrFact
 
setType(String) - Method in class org.gbif.api.model.occurrence.OccurrenceRelation
 
setType(StepType) - Method in class org.gbif.api.model.pipelines.PipelineStep
 
setType(ContactType) - Method in class org.gbif.api.model.registry.Contact
 
setType(DatasetType) - Method in class org.gbif.api.model.registry.Dataset
Persisted in the database table.
setType(CuratorialUnitType) - Method in class org.gbif.api.model.registry.eml.curatorial.CuratorialUnit
 
setType(VerbatimTimePeriodType) - Method in class org.gbif.api.model.registry.eml.temporal.VerbatimTimePeriod
 
setType(EndpointType) - Method in class org.gbif.api.model.registry.Endpoint
 
setType(IdentifierType) - Method in class org.gbif.api.model.registry.Identifier
 
setType(InstallationType) - Method in class org.gbif.api.model.registry.Installation
 
setType(MetadataType) - Method in class org.gbif.api.model.registry.Metadata
 
setType(NodeType) - Method in class org.gbif.api.model.registry.Node
 
setType(DatasetType) - Method in class org.gbif.api.model.registry.search.DatasetSearchResult
 
setType(DatasetType) - Method in class org.gbif.api.model.registry.search.DatasetSuggestResult
 
setTypeDesignatedBy(String) - Method in class org.gbif.api.model.checklistbank.TypeSpecimen
 
setTypeDesignationType(TypeDesignationType) - Method in class org.gbif.api.model.checklistbank.TypeSpecimen
 
setTypeSpecimenCount(Integer) - Method in class org.gbif.api.model.collections.Collection
 
setTypeSpecimenCount(Integer) - Method in class org.gbif.api.model.collections.Institution
 
setTypeSpecimenCount(String) - Method in class org.gbif.api.model.collections.request.SearchRequest
 
setTypeSpecimens(List<TypeSpecimen>) - Method in class org.gbif.api.model.checklistbank.NameUsageContainer
 
setTypeStatus(TypeStatus) - Method in class org.gbif.api.model.checklistbank.TypeSpecimen
Deprecated.
setTypeStatus(String) - Method in class org.gbif.api.model.occurrence.Occurrence
 
setTypeVerbatim(String) - Method in class org.gbif.api.model.registry.eml.curatorial.CuratorialUnit
 
setTypifiedName(String) - Method in class org.gbif.api.model.occurrence.Occurrence
 
setUnit(String) - Method in class org.gbif.api.model.occurrence.MeasurementOrFact
 
setUpper(int) - Method in class org.gbif.api.model.registry.eml.curatorial.CuratorialUnitComposite
 
setUpper(int) - Method in class org.gbif.api.model.registry.eml.curatorial.CuratorialUnitRange
 
setUrl(URI) - Method in class org.gbif.api.model.registry.eml.DataDescription
 
setUrl(URI) - Method in class org.gbif.api.model.registry.Endpoint
 
setUsage(RankedName) - Method in class org.gbif.api.v2.NameUsageMatch2
 
setUsageKey(Integer) - Method in class org.gbif.api.model.checklistbank.NameUsageMatch
 
setUsagesCount(int) - Method in class org.gbif.api.model.checklistbank.DatasetMetrics
 
setUserId(Set<String>) - Method in class org.gbif.api.model.registry.CitationContact
 
setUserId(List<String>) - Method in class org.gbif.api.model.registry.Contact
 
setUserIds(List<UserId>) - Method in class org.gbif.api.model.collections.Contact
 
setUserName(String) - Method in class org.gbif.api.model.common.AbstractGbifUser
 
setUserName(String) - Method in class org.gbif.api.model.common.User
Deprecated.
 
setValue(String) - Method in class org.gbif.api.model.occurrence.AgentIdentifier
 
setValue(String) - Method in class org.gbif.api.model.occurrence.MeasurementOrFact
 
setValue(String) - Method in class org.gbif.api.model.pipelines.PipelineStep.MetricInfo
 
setValue(String) - Method in class org.gbif.api.model.registry.MachineTag
 
setValue(String) - Method in class org.gbif.api.model.registry.Tag
 
setVerbatim(V) - Method in class org.gbif.api.model.common.InterpretedField
Deprecated.
 
setVerbatimEventDate(String) - Method in class org.gbif.api.model.checklistbank.TypeSpecimen
Deprecated.
setVerbatimExtensions(Set<Extension>) - Method in class org.gbif.api.model.occurrence.PredicateDownloadRequest
 
setVerbatimField(Term, String) - Method in class org.gbif.api.model.occurrence.VerbatimOccurrence
For setting a specific field without having to replace the entire verbatimFields Map.
setVerbatimFields(Map<Term, String>) - Method in class org.gbif.api.model.occurrence.VerbatimOccurrence
 
setVerbatimLabel(String) - Method in class org.gbif.api.model.checklistbank.TypeSpecimen
Deprecated.
setVerbatimLatitude(String) - Method in class org.gbif.api.model.checklistbank.TypeSpecimen
Deprecated.
setVerbatimLongitude(String) - Method in class org.gbif.api.model.checklistbank.TypeSpecimen
Deprecated.
setVerbatimOccurrencesPersistedError(long) - Method in class org.gbif.api.model.crawler.DatasetProcessStatus
 
setVerbatimOccurrencesPersistedSuccessful(long) - Method in class org.gbif.api.model.crawler.DatasetProcessStatus
 
setVerbatimScientificName(String) - Method in class org.gbif.api.model.occurrence.Occurrence
 
setVerbose(boolean) - Method in class org.gbif.api.model.collections.lookup.LookupParams
 
setVernacularName(String) - Method in class org.gbif.api.model.checklistbank.NameUsage
 
setVernacularName(String) - Method in class org.gbif.api.model.checklistbank.VernacularName
 
setVernacularNames(List<VernacularName>) - Method in class org.gbif.api.model.checklistbank.NameUsageContainer
 
setVernacularNames(List<VernacularName>) - Method in class org.gbif.api.model.checklistbank.search.NameUsageSearchResult
 
setVersion(String) - Method in class org.gbif.api.model.registry.Dataset
 
setWaterBody(String) - Method in class org.gbif.api.model.occurrence.Occurrence
 
setYear(String) - Method in class org.gbif.api.model.checklistbank.ParsedName
 
setYear(Integer) - Method in class org.gbif.api.model.occurrence.Occurrence
 
setYearMonth(LocalDate) - Method in class org.gbif.api.model.occurrence.DownloadStatistics
 
Sex - Enum in org.gbif.api.vocabulary
Vocabulary for the sex of an organism.
SIMPLE_ISO_DATE_STR_PATTERN - Static variable in class org.gbif.api.util.IsoDateParsingUtils
 
SIMPLE_ISO_PATTERN - Static variable in class org.gbif.api.util.IsoDateParsingUtils
 
SIMPLE_ISO_YEAR_MONTH_PATTERN - Static variable in class org.gbif.api.util.SearchTypeValidator
 
simpleName() - Method in enum org.gbif.dwc.terms.AcefTerm
 
simpleName() - Method in enum org.gbif.dwc.terms.AcTerm
 
simpleName() - Method in class org.gbif.dwc.terms.BibTexTerm
 
simpleName() - Method in enum org.gbif.dwc.terms.DcElement
 
simpleName() - Method in enum org.gbif.dwc.terms.DcTerm
 
simpleName() - Method in enum org.gbif.dwc.terms.DwcaTerm
 
simpleName() - Method in enum org.gbif.dwc.terms.DwcTerm
The simple term name without a namespace.
simpleName() - Method in enum org.gbif.dwc.terms.GadmTerm
 
simpleName() - Method in enum org.gbif.dwc.terms.GbifInternalTerm
 
simpleName() - Method in enum org.gbif.dwc.terms.GbifTerm
The simple term name without a namespace.
simpleName() - Method in enum org.gbif.dwc.terms.IucnTerm
 
simpleName() - Method in enum org.gbif.dwc.terms.PlaziTerm
 
simpleName() - Method in interface org.gbif.dwc.terms.Term
The simple term name without any namespace or paths.
simpleName() - Method in class org.gbif.dwc.terms.UnknownTerm
 
simpleName() - Method in enum org.gbif.dwc.terms.XmpRightsTerm
 
simpleName() - Method in enum org.gbif.dwc.terms.XmpTerm
 
SimplePredicate<S extends SearchParameter> - Class in org.gbif.api.model.predicate
 
SingleDate - Class in org.gbif.api.model.registry.eml.temporal
A single instance in time.
SingleDate() - Constructor for class org.gbif.api.model.registry.eml.temporal.SingleDate
 
sortBy(CollectionsSortField) - Method in class org.gbif.api.model.collections.request.CollectionSearchRequest.Builder
 
sortBy(CollectionsSortField) - Method in class org.gbif.api.model.collections.request.InstitutionSearchRequest.Builder
 
sortOrder(SortOrder) - Method in class org.gbif.api.model.collections.request.CollectionSearchRequest.Builder
 
sortOrder(SortOrder) - Method in class org.gbif.api.model.collections.request.InstitutionSearchRequest.Builder
 
SortOrder - Enum in org.gbif.api.vocabulary
 
Source() - Constructor for class org.gbif.api.model.collections.SourceableField.Source
 
Source - Enum in org.gbif.api.vocabulary.collections
Sources for GRSciColl.
Sourceable - Annotation Type in org.gbif.api.model.collections
Annotation to indicate that a field can be populated from external sources.
SourceableField - Class in org.gbif.api.model.collections
Holds the info about the GRSciColl fields whose master source is outside GRSciColl.
SourceableField() - Constructor for class org.gbif.api.model.collections.SourceableField
 
SourceableField.Source - Class in org.gbif.api.model.collections
 
Sourceables - Annotation Type in org.gbif.api.model.collections
Container annotation for multiple Sourceable annotations.
SpeciesProfile - Class in org.gbif.api.model.checklistbank
SpeciesProfile Model Object represents a species profile which describes basic species characteristics.
SpeciesProfile() - Constructor for class org.gbif.api.model.checklistbank.SpeciesProfile
 
SpeciesProfileService - Interface in org.gbif.api.service.checklistbank
Service interface for SpeciesProfile Interface methods.
specimenTypeStatusList() - Static method in enum org.gbif.api.vocabulary.TypeStatus
 
SpellCheckResponse - Class in org.gbif.api.model.common.search
Contains the response information of a spell check request.
SpellCheckResponse() - Constructor for class org.gbif.api.model.common.search.SpellCheckResponse
 
SpellCheckResponse.Suggestion - Class in org.gbif.api.model.common.search
Information about a suggestion made for possible correct spelled version of a search term.
SqlDownloadRequest - Class in org.gbif.api.model.occurrence
SQL Based downloads — experimental feature.
SqlDownloadRequest() - Constructor for class org.gbif.api.model.occurrence.SqlDownloadRequest
 
SqlDownloadRequest(String, String, Collection<String>, Boolean, DownloadType, DownloadFormat) - Constructor for class org.gbif.api.model.occurrence.SqlDownloadRequest
Full constructor.
startedCrawling(Date) - Method in class org.gbif.api.model.crawler.DatasetProcessStatus.Builder
 
Status - Enum in org.gbif.api.model.collections.suggestions
 
status(Response.Status) - Method in class org.gbif.api.model.common.messaging.Response.Builder
 
statusCode(Integer) - Method in class org.gbif.api.model.common.messaging.Response.Builder
 
statusReason() - Method in class org.gbif.api.model.common.messaging.Response
 
StepRunner - Enum in org.gbif.api.model.pipelines
General runners, STANDALONE - run an app using local resources, DISTRIBUTED - run an app using YARN cluster.
STEPS_BY_FINISHED_ASC - Static variable in class org.gbif.api.model.pipelines.PipelineStep
Comparator that sorts pipeline steps by start date and then by finished date in ascending order.
STEPS_BY_TYPE_ASC - Static variable in class org.gbif.api.model.pipelines.PipelineStep
 
STEPS_REQUIRED_MESSAGE - Static variable in interface org.gbif.api.service.pipelines.PipelinesHistoryService
 
StepType - Enum in org.gbif.api.model.pipelines
Enum to represent the pipelines step names.
stripOffsetOrZone(TemporalAccessor, boolean) - Static method in class org.gbif.api.util.IsoDateParsingUtils
Remove the offset, either ignoring it or using it to adjust the time.
stripOffsetOrZoneExceptUTC(TemporalAccessor, boolean) - Static method in class org.gbif.api.util.IsoDateParsingUtils
Remove the offset, either ignoring it or using it to adjust the time, unless the offset is 0 (UTC).
suggest(String) - Method in interface org.gbif.api.service.collections.CollectionService
Provides a simple suggest service.
suggest(String) - Method in interface org.gbif.api.service.collections.InstitutionService
Provides a simple suggest service.
suggest(R) - Method in interface org.gbif.api.service.common.SuggestService
Issues a SearchRequest for a suggest and retrieves the list of matches.
suggest(String) - Method in interface org.gbif.api.service.registry.InstallationService
Provides a simple suggest service.
suggest(String) - Method in interface org.gbif.api.service.registry.NetworkService
Provides a simple suggest service.
suggest(String) - Method in interface org.gbif.api.service.registry.NodeService
Provides a simple suggest service.
suggest(String) - Method in interface org.gbif.api.service.registry.OrganizationService
Provides a simple suggest service.
suggestCatalogNumbers(String, Integer) - Method in interface org.gbif.api.service.occurrence.OccurrenceSearchService
Searches catalog numbers which start with the input prefix.
suggestCollectionCodes(String, Integer) - Method in interface org.gbif.api.service.occurrence.OccurrenceSearchService
Searches collection codes which start with the input prefix.
suggestDatasetName(String, Integer) - Method in interface org.gbif.api.service.occurrence.OccurrenceSearchService
Searches dataset names which start with the input prefix.
suggestEventId(String, Integer) - Method in interface org.gbif.api.service.occurrence.OccurrenceSearchService
Searches DwC eventIds which start with the input prefix.
suggestIdentifiedBy(String, Integer) - Method in interface org.gbif.api.service.occurrence.OccurrenceSearchService
Searches collector names (dwc:identifiedBy) which start with the input prefix.
suggestInstitutionCodes(String, Integer) - Method in interface org.gbif.api.service.occurrence.OccurrenceSearchService
Searches institution codes which start with the input prefix.
Suggestion() - Constructor for class org.gbif.api.model.common.search.SpellCheckResponse.Suggestion
 
suggestLocalities(String, Integer) - Method in interface org.gbif.api.service.occurrence.OccurrenceSearchService
Searches DwC localities which start with the input prefix.
suggestOccurrenceIds(String, Integer) - Method in interface org.gbif.api.service.occurrence.OccurrenceSearchService
Searches DwC occurrenceIds which start with the input prefix.
suggestOrganismIds(String, Integer) - Method in interface org.gbif.api.service.occurrence.OccurrenceSearchService
Searches DwC organismsIds which start with the input prefix.
suggestOtherCatalogNumbers(String, Integer) - Method in interface org.gbif.api.service.occurrence.OccurrenceSearchService
Searches other catalog numbers which start with the input prefix.
suggestParentEventId(String, Integer) - Method in interface org.gbif.api.service.occurrence.OccurrenceSearchService
Searches DwC parentEventIds which start with the input prefix.
suggestRecordedBy(String, Integer) - Method in interface org.gbif.api.service.occurrence.OccurrenceSearchService
Searches collector names (dwc:recordedBy) which start with the input prefix.
suggestRecordNumbers(String, Integer) - Method in interface org.gbif.api.service.occurrence.OccurrenceSearchService
Searches record numbers which start with the input prefix.
suggestSamplingProtocol(String, Integer) - Method in interface org.gbif.api.service.occurrence.OccurrenceSearchService
Searches DwC sampling protocols which start with the input prefix.
SuggestService<T,P extends Enum<?> & SearchParameter,R extends SearchRequest<P>> - Interface in org.gbif.api.service.common
Generic search interface for a suggest/autocomplete service.
suggestStateProvinces(String, Integer) - Method in interface org.gbif.api.service.occurrence.OccurrenceSearchService
Searches DwC state/provinces which start with the input prefix.
suggestWaterBodies(String, Integer) - Method in interface org.gbif.api.service.occurrence.OccurrenceSearchService
Searches DwC water bodies which start with the input prefix.

T

TableOfContents - Class in org.gbif.api.model.checklistbank
A simple class to represent a table of contents for multiple languages.
TableOfContents() - Constructor for class org.gbif.api.model.checklistbank.TableOfContents
 
Tag - Class in org.gbif.api.model.registry
 
Tag() - Constructor for class org.gbif.api.model.registry.Tag
 
Tag(String) - Constructor for class org.gbif.api.model.registry.Tag
 
Tag(String, String) - Constructor for class org.gbif.api.model.registry.Tag
 
Taggable - Interface in org.gbif.api.model.registry
Generic tag interface for entities.
TagName - Enum in org.gbif.api.vocabulary
Known MachineTag.getName() name value.
TagNamespace - Enum in org.gbif.api.vocabulary
Known namespaces for tags.
TagService - Interface in org.gbif.api.service.registry
Service provides a set of operations on Tag.
tagValueAsDouble(MachineTag) - Static method in class org.gbif.api.util.MachineTagUtils
 
tagValueAsInteger(MachineTag) - Static method in class org.gbif.api.util.MachineTagUtils
 
TAXON_KEY - Static variable in class org.gbif.api.model.metrics.cube.OccurrenceCube
 
TAXONOMIC_TERMS - Static variable in enum org.gbif.dwc.terms.DwcTerm
 
TAXONOMIC_TERMS - Static variable in enum org.gbif.dwc.terms.GbifTerm
Lists all GBIF terms in taxon group.
TaxonomicCoverage - Class in org.gbif.api.model.registry.eml
An individual coverage.
TaxonomicCoverage() - Constructor for class org.gbif.api.model.registry.eml.TaxonomicCoverage
 
TaxonomicCoverage(String, String, InterpretedEnum<String, Rank>) - Constructor for class org.gbif.api.model.registry.eml.TaxonomicCoverage
 
TaxonomicCoverages - Class in org.gbif.api.model.registry.eml
 
TaxonomicCoverages() - Constructor for class org.gbif.api.model.registry.eml.TaxonomicCoverages
 
TaxonomicCoverages(String, List<TaxonomicCoverage>) - Constructor for class org.gbif.api.model.registry.eml.TaxonomicCoverages
 
TaxonomicStatus - Enum in org.gbif.api.vocabulary
The taxonomic status of a taxon.
TechnicalInstallationType - Enum in org.gbif.api.vocabulary
Deprecated.
This class is no longer used.
TemporalCoverage - Class in org.gbif.api.model.registry.eml.temporal
The base of all types of temporal coverages.
TemporalCoverage() - Constructor for class org.gbif.api.model.registry.eml.temporal.TemporalCoverage
 
TemporalCoverageFormatterVisitor - Interface in org.gbif.api.util.formatter
Allows formatter to be dynamically selected based on the concrete type of TemporalCoverage at runtime.
Term - Interface in org.gbif.dwc.terms
 
TermComparator - Class in org.gbif.dwc.terms
Compares terms by their qualified name.
TermComparator() - Constructor for class org.gbif.dwc.terms.TermComparator
 
TermDeserializer - Class in org.gbif.dwc.terms.jackson
A json deserializer that turns full qualified term names into dwc terms instances.
TermDeserializer() - Constructor for class org.gbif.dwc.terms.jackson.TermDeserializer
 
TermFactory - Class in org.gbif.dwc.terms
Simple, threadsafe factory for terms that knows about all ConceptTerms of this library and keeps singletons for all unknown Term instances.
TermKeyDeserializer - Class in org.gbif.dwc.terms.jackson
 
TermKeyDeserializer() - Constructor for class org.gbif.dwc.terms.jackson.TermKeyDeserializer
 
TermKeySerializer - Class in org.gbif.dwc.terms.jackson
 
TermKeySerializer() - Constructor for class org.gbif.dwc.terms.jackson.TermKeySerializer
 
TermMapListDeserializer - Class in org.gbif.api.jackson
Deprecated.
TermMapListDeserializer() - Constructor for class org.gbif.api.jackson.TermMapListDeserializer
Deprecated.
 
TermMapListSerializer - Class in org.gbif.api.jackson
Deprecated.
TermMapListSerializer() - Constructor for class org.gbif.api.jackson.TermMapListSerializer
Deprecated.
 
Terms - Class in org.gbif.dwc.terms
Utility methods for Term
TermSerializer - Class in org.gbif.dwc.terms.jackson
A json serializer that turns dwc terms into their full qualified term name.
TermSerializer() - Constructor for class org.gbif.dwc.terms.jackson.TermSerializer
 
TEST_PREFIX - Static variable in class org.gbif.api.model.common.DOI
A DOI prefix provided by DataCite to be used in tests.
ThreatStatus - Enum in org.gbif.api.vocabulary
The IUCN threat status.
TitleDeserializer() - Constructor for class org.gbif.api.vocabulary.Country.TitleDeserializer
 
TitleSerializer() - Constructor for class org.gbif.api.vocabulary.Country.TitleSerializer
 
toDatasetKey() - Method in class org.gbif.api.util.DatasetKey
Generates the serialized dataset key as used in the Dataset class.
toGeoDistanceString() - Method in class org.gbif.api.model.occurrence.geo.DistanceUnit.GeoDistance
 
toKeywords() - Method in class org.gbif.api.model.registry.eml.KeywordCollection
 
toKeywords() - Method in interface org.gbif.api.model.registry.eml.Keywords
 
toKeywords() - Method in class org.gbif.api.model.registry.eml.temporal.DateRange
 
toKeywords() - Method in class org.gbif.api.model.registry.eml.temporal.SingleDate
 
toKeywords() - Method in class org.gbif.api.model.registry.eml.temporal.VerbatimTimePeriod
 
toString() - Method in class org.gbif.api.model.ChallengeCode
 
toString() - Method in class org.gbif.api.model.checklistbank.DatasetMetrics
 
toString() - Method in class org.gbif.api.model.checklistbank.Description
 
toString() - Method in class org.gbif.api.model.checklistbank.Distribution
 
toString() - Method in class org.gbif.api.model.checklistbank.NameUsage
 
toString() - Method in class org.gbif.api.model.checklistbank.NameUsageContainer
 
toString() - Method in class org.gbif.api.model.checklistbank.NameUsageMatch
 
toString() - Method in class org.gbif.api.model.checklistbank.NameUsageMetrics
 
toString() - Method in class org.gbif.api.model.checklistbank.ParsedName
 
toString() - Method in class org.gbif.api.model.checklistbank.Reference
 
toString() - Method in class org.gbif.api.model.checklistbank.search.NameUsageSearchResult
 
toString() - Method in class org.gbif.api.model.checklistbank.search.NameUsageSuggestResult
 
toString() - Method in class org.gbif.api.model.checklistbank.SpeciesProfile
 
toString() - Method in class org.gbif.api.model.checklistbank.TableOfContents
 
toString() - Method in class org.gbif.api.model.checklistbank.TypeSpecimen
 
toString() - Method in class org.gbif.api.model.checklistbank.VerbatimNameUsage
 
toString() - Method in class org.gbif.api.model.checklistbank.VernacularName
 
toString() - Method in class org.gbif.api.model.collections.Address
 
toString() - Method in class org.gbif.api.model.collections.AlternativeCode
 
toString() - Method in class org.gbif.api.model.collections.CollectionImportParams
 
toString() - Method in class org.gbif.api.model.collections.Contact
 
toString() - Method in class org.gbif.api.model.collections.duplicates.DuplicatesRequest
 
toString() - Method in class org.gbif.api.model.collections.InstitutionImportParams
 
toString() - Method in class org.gbif.api.model.collections.lookup.BaseEntityMatched
 
toString() - Method in class org.gbif.api.model.collections.lookup.CollectionMatched
 
toString() - Method in class org.gbif.api.model.collections.lookup.LookupParams
 
toString() - Method in class org.gbif.api.model.collections.lookup.Match
 
toString() - Method in class org.gbif.api.model.collections.MasterSourceMetadata
 
toString() - Method in class org.gbif.api.model.collections.OccurrenceMapping
 
toString() - Method in class org.gbif.api.model.collections.UserId
 
toString() - Method in class org.gbif.api.model.common.AbstractGbifUser
 
toString() - Method in class org.gbif.api.model.common.DOI
 
toString() - Method in class org.gbif.api.model.common.DoiData
 
toString() - Method in class org.gbif.api.model.common.GbifUser
 
toString() - Method in class org.gbif.api.model.common.Identifier
 
toString() - Method in class org.gbif.api.model.common.InterpretedField
Deprecated.
 
toString() - Method in class org.gbif.api.model.common.MediaObject
 
toString() - Method in class org.gbif.api.model.common.messaging.Response
 
toString() - Method in class org.gbif.api.model.common.paging.PageableBase
 
toString() - Method in class org.gbif.api.model.common.paging.PagingResponse
 
toString() - Method in class org.gbif.api.model.common.search.Facet.Count
 
toString() - Method in class org.gbif.api.model.common.search.Facet
 
toString() - Method in class org.gbif.api.model.common.search.SearchRequest
 
toString() - Method in class org.gbif.api.model.common.search.SearchResponse
 
toString() - Method in class org.gbif.api.model.common.search.SpellCheckResponse.Suggestion
 
toString() - Method in class org.gbif.api.model.common.search.SpellCheckResponse
 
toString() - Method in class org.gbif.api.model.common.User
Deprecated.
 
toString() - Method in class org.gbif.api.model.crawler.CrawlJob
 
toString() - Method in class org.gbif.api.model.crawler.DatasetProcessStatus
 
toString() - Method in class org.gbif.api.model.crawler.DwcaValidationReport
 
toString() - Method in class org.gbif.api.model.crawler.GenericValidationReport
 
toString() - Method in class org.gbif.api.model.crawler.OccurrenceValidationReport
 
toString() - Method in class org.gbif.api.model.metrics.cube.Dimension
 
toString() - Method in class org.gbif.api.model.metrics.cube.Rollup
 
toString() - Method in class org.gbif.api.model.metrics.RecordError
Deprecated.
 
toString() - Method in class org.gbif.api.model.occurrence.AgentIdentifier
 
toString() - Method in class org.gbif.api.model.occurrence.DownloadRequest
 
toString() - Method in class org.gbif.api.model.occurrence.DownloadStatistics
 
toString() - Method in class org.gbif.api.model.occurrence.Gadm
 
toString() - Method in class org.gbif.api.model.occurrence.GadmFeature
 
toString() - Method in class org.gbif.api.model.occurrence.geo.DistanceUnit.Distance
 
toString() - Method in class org.gbif.api.model.occurrence.geo.DistanceUnit.GeoDistance
 
toString(double) - Method in enum org.gbif.api.model.occurrence.geo.DistanceUnit
Convert a value to a distance string
toString() - Method in enum org.gbif.api.model.occurrence.geo.DistanceUnit
 
toString() - Method in class org.gbif.api.model.occurrence.MeasurementOrFact
 
toString() - Method in class org.gbif.api.model.occurrence.OccurrenceRelation
 
toString() - Method in class org.gbif.api.model.occurrence.PredicateDownloadRequest
 
toString() - Method in class org.gbif.api.model.occurrence.SqlDownloadRequest
 
toString() - Method in class org.gbif.api.model.occurrence.VerbatimOccurrence
 
toString() - Method in class org.gbif.api.model.pipelines.PipelineExecution
 
toString() - Method in class org.gbif.api.model.pipelines.PipelineProcess
 
toString() - Method in class org.gbif.api.model.pipelines.PipelineStep.MetricInfo
 
toString() - Method in class org.gbif.api.model.pipelines.PipelineStep
 
toString() - Method in class org.gbif.api.model.predicate.CompoundPredicate
 
toString() - Method in class org.gbif.api.model.predicate.FullTextSearchPredicate
 
toString() - Method in class org.gbif.api.model.predicate.GeoDistancePredicate
 
toString() - Method in class org.gbif.api.model.predicate.InPredicate
 
toString() - Method in class org.gbif.api.model.predicate.IsNotNullPredicate
 
toString() - Method in class org.gbif.api.model.predicate.IsNullPredicate
 
toString() - Method in class org.gbif.api.model.predicate.NotPredicate
 
toString() - Method in class org.gbif.api.model.predicate.RangePredicate
 
toString() - Method in class org.gbif.api.model.predicate.SimplePredicate
 
toString() - Method in class org.gbif.api.model.predicate.WithinPredicate
 
toString() - Method in class org.gbif.api.model.registry.Citation
 
toString() - Method in class org.gbif.api.model.registry.CitationContact
 
toString() - Method in class org.gbif.api.model.registry.Comment
 
toString() - Method in class org.gbif.api.model.registry.Contact
 
toString() - Method in class org.gbif.api.model.registry.Dataset
 
toString() - Method in class org.gbif.api.model.registry.eml.Collection
 
toString() - Method in class org.gbif.api.model.registry.eml.curatorial.CuratorialUnit
 
toString() - Method in class org.gbif.api.model.registry.eml.curatorial.CuratorialUnitComposite
 
toString() - Method in class org.gbif.api.model.registry.eml.curatorial.CuratorialUnitCount
 
toString() - Method in class org.gbif.api.model.registry.eml.curatorial.CuratorialUnitRange
 
toString() - Method in class org.gbif.api.model.registry.eml.DataDescription
 
toString() - Method in class org.gbif.api.model.registry.eml.geospatial.GeospatialCoverage
 
toString() - Method in class org.gbif.api.model.registry.eml.KeywordCollection
 
toString() - Method in class org.gbif.api.model.registry.eml.Project
 
toString() - Method in class org.gbif.api.model.registry.eml.SamplingDescription
 
toString() - Method in class org.gbif.api.model.registry.eml.TaxonomicCoverage
 
toString() - Method in class org.gbif.api.model.registry.eml.TaxonomicCoverages
 
toString() - Method in class org.gbif.api.model.registry.eml.temporal.DateRange
 
toString() - Method in class org.gbif.api.model.registry.eml.temporal.SingleDate
 
toString() - Method in class org.gbif.api.model.registry.eml.temporal.VerbatimTimePeriod
 
toString() - Method in class org.gbif.api.model.registry.Endpoint
 
toString() - Method in class org.gbif.api.model.registry.Grid
 
toString() - Method in class org.gbif.api.model.registry.Identifier
 
toString() - Method in class org.gbif.api.model.registry.Installation
 
toString() - Method in class org.gbif.api.model.registry.MachineTag
 
toString() - Method in class org.gbif.api.model.registry.Metadata
 
toString() - Method in class org.gbif.api.model.registry.metasync.MetasyncHistory
 
toString() - Method in class org.gbif.api.model.registry.Network
 
toString() - Method in class org.gbif.api.model.registry.Node
 
toString() - Method in class org.gbif.api.model.registry.Organization
 
toString() - Method in class org.gbif.api.model.registry.search.collections.KeyCodeNameResult
 
toString() - Method in class org.gbif.api.model.registry.search.DatasetSearchResult
 
toString() - Method in class org.gbif.api.model.registry.search.DatasetSuggestResult
 
toString() - Method in class org.gbif.api.model.registry.search.KeyTitleResult
 
toString() - Method in class org.gbif.api.model.registry.Tag
 
toString() - Method in class org.gbif.api.util.IsoDateInterval
Returns the date-time interval formatted as a single value where the from and to values are the same (e.g.
toString(boolean) - Method in class org.gbif.api.util.IsoDateInterval
Returns the date-time interval formatted as a single value where the from and to values are the same (e.g.
toString() - Method in class org.gbif.api.util.Range
 
toString() - Method in class org.gbif.api.v2.RankedName
 
toString() - Method in enum org.gbif.dwc.terms.AcefTerm
 
toString() - Method in enum org.gbif.dwc.terms.AcTerm
 
toString() - Method in class org.gbif.dwc.terms.BibTexTerm
 
toString() - Method in enum org.gbif.dwc.terms.DcElement
 
toString() - Method in enum org.gbif.dwc.terms.DcTerm
 
toString() - Method in enum org.gbif.dwc.terms.DwcaTerm
 
toString() - Method in enum org.gbif.dwc.terms.DwcTerm
 
toString() - Method in enum org.gbif.dwc.terms.GadmTerm
 
toString() - Method in enum org.gbif.dwc.terms.GbifInternalTerm
 
toString() - Method in enum org.gbif.dwc.terms.GbifTerm
 
toString() - Method in enum org.gbif.dwc.terms.IucnTerm
 
toString() - Method in enum org.gbif.dwc.terms.PlaziTerm
 
toString() - Method in class org.gbif.dwc.terms.UnknownTerm
 
toString() - Method in enum org.gbif.dwc.terms.XmpRightsTerm
 
toString() - Method in enum org.gbif.dwc.terms.XmpTerm
 
toWellKnownText() - Method in class org.gbif.api.model.registry.eml.geospatial.BoundingBox
 
toWellKnownText() - Method in interface org.gbif.api.model.registry.eml.geospatial.Geometry
 
toWellKnownText() - Method in class org.gbif.api.model.registry.eml.geospatial.GeospatialCoverage
 
toWellKnownText() - Method in class org.gbif.api.model.registry.eml.geospatial.Point
 
toWellKnownText() - Method in class org.gbif.api.model.registry.eml.geospatial.Polygon
 
Trim - Annotation Type in org.gbif.api.annotation
Indicates that the field is suitable for String trimming.
type - Variable in exception org.gbif.api.exception.UnparsableException
 
type() - Method in enum org.gbif.api.model.checklistbank.search.NameUsageSearchParameter
 
type(InstitutionType) - Method in class org.gbif.api.model.collections.request.InstitutionSearchRequest.Builder
 
Type - Enum in org.gbif.api.model.collections.suggestions
 
type() - Method in interface org.gbif.api.model.common.search.SearchParameter
 
type() - Method in enum org.gbif.api.model.literature.search.LiteratureSearchParameter
 
type() - Method in enum org.gbif.api.model.occurrence.search.InternalOccurrenceSearchParameter
 
type() - Method in enum org.gbif.api.model.occurrence.search.OccurrenceSearchParameter
 
type() - Method in enum org.gbif.api.model.registry.search.DatasetSearchParameter
 
TYPE_PARAM - Static variable in class org.gbif.api.model.registry.search.DatasetRequestSearchParams
 
TYPE_STATUS - Static variable in class org.gbif.api.model.metrics.cube.OccurrenceCube
 
TypeDesignationType - Enum in org.gbif.api.vocabulary
A vocabulary to be used for reasons for a type designation of a specimen or name.
TYPES - Static variable in enum org.gbif.api.vocabulary.IdentifierType
 
TypeSpecimen - Class in org.gbif.api.model.checklistbank
TypeSpecimen Model originally designed for both specimens and types, including type specimens, type species and type genera and simple specimens unrelated to types.
TypeSpecimen() - Constructor for class org.gbif.api.model.checklistbank.TypeSpecimen
 
typeSpecimenCount(String) - Method in class org.gbif.api.model.collections.request.CollectionSearchRequest.Builder
 
typeSpecimenCount(String) - Method in class org.gbif.api.model.collections.request.InstitutionSearchRequest.Builder
 
TypeSpecimenService - Interface in org.gbif.api.service.checklistbank
Service interface for TypeSpecimen Interface methods.
TypeStatus - Enum in org.gbif.api.vocabulary
A vocabulary to be used for a nomenclatural type status of a specimen or name.

U

UnicodeUtils - Class in org.gbif.api.util
Utilities dealing with unicode strings
UnicodeUtils() - Constructor for class org.gbif.api.util.UnicodeUtils
 
unit - Variable in class org.gbif.api.model.occurrence.geo.DistanceUnit.Distance
 
UnknownTerm - Class in org.gbif.dwc.terms
 
UnknownTerm(URI, String, String, boolean) - Constructor for class org.gbif.dwc.terms.UnknownTerm
 
UnknownTerm(URI, boolean) - Constructor for class org.gbif.dwc.terms.UnknownTerm
 
unlock(String) - Method in interface org.gbif.api.service.occurrence.DownloadLauncherService
 
unlockAll() - Method in interface org.gbif.api.service.occurrence.DownloadLauncherService
 
UnparsableException - Exception in org.gbif.api.exception
Exception thrown when a scientific name cannot be parsed.
UnparsableException(NameType, String) - Constructor for exception org.gbif.api.exception.UnparsableException
 
update(T, boolean) - Method in interface org.gbif.api.service.collections.CollectionEntityService
Updates an existing entity.
update(T) - Method in interface org.gbif.api.service.collections.CrudService
Updates an existing entity.
update(W) - Method in interface org.gbif.api.service.common.CrudService
Updates the entity.
update(T) - Method in interface org.gbif.api.service.registry.NetworkEntityService
Updates an existing entity.
update(Download) - Method in interface org.gbif.api.service.registry.OccurrenceDownloadService
Update an existing occurrence download.
updateChangeSuggestion(R) - Method in interface org.gbif.api.service.collections.ChangeSuggestionService
 
updateContact(UUID, Contact) - Method in interface org.gbif.api.service.registry.ContactService
Updates the given contact for the target entity.
updateContactPerson(UUID, Contact) - Method in interface org.gbif.api.service.collections.ContactService
Updates a Contact contact in an entity.
updateDatasetProcessStatus(DatasetProcessStatus) - Method in interface org.gbif.api.service.registry.DatasetProcessStatusService
Persists the DatasetProcessStatus object which must exist.
updatePipelineStep(PipelineStep) - Method in interface org.gbif.api.service.pipelines.PipelinesHistoryService
Update the information of a pipeline step.
upperEndpoint() - Method in class org.gbif.api.util.Range
 
URIValidator - Class in org.gbif.api.util
Constrain validator that validates URI objects with a @HttpURI annotation.
URIValidator() - Constructor for class org.gbif.api.util.URIValidator
 
User - Class in org.gbif.api.model.common
Deprecated.
replaced by GbifUser
User() - Constructor for class org.gbif.api.model.common.User
Deprecated.
 
UserId - Class in org.gbif.api.model.collections
User ID for GRSciColl contacts.
UserId() - Constructor for class org.gbif.api.model.collections.UserId
 
UserId(IdType, String) - Constructor for class org.gbif.api.model.collections.UserId
 
UserPrincipal - Class in org.gbif.api.model.common
Deprecated.
replaced by GbifUserPrincipal
UserPrincipal(User) - Constructor for class org.gbif.api.model.common.UserPrincipal
Deprecated.
 
UserRole - Enum in org.gbif.api.vocabulary
Roles here shall not be defined in AppRole (validated by unit test).
UserService - Interface in org.gbif.api.service.common
Deprecated.

V

validate(SearchParameter, String) - Static method in class org.gbif.api.util.SearchTypeValidator
Validates that a given parameter value matches the expected type of the parameter as defined by SearchParameter.type() and throws an IllegalArgumentException otherwise.
validateGeoDistance(String, String, String) - Static method in class org.gbif.api.util.SearchTypeValidator
 
ValidEmail - Annotation Type in org.gbif.api.util.validators.email
Annotation to indicate that an email has to be valid.
value - Variable in class org.gbif.api.model.occurrence.geo.DistanceUnit.Distance
 
valueOf(String) - Static method in enum org.gbif.api.model.checklistbank.NameUsageMatch.MatchType
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.gbif.api.model.checklistbank.search.NameUsageSearchParameter
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.gbif.api.model.checklistbank.search.NameUsageSearchRequest.NameUsageQueryField
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.gbif.api.model.collections.Batch.State
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.gbif.api.model.collections.CollectionEntityType
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.gbif.api.model.collections.lookup.Match.MatchType
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.gbif.api.model.collections.lookup.Match.Reason
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.gbif.api.model.collections.lookup.Match.Status
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.gbif.api.model.collections.suggestions.Status
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.gbif.api.model.collections.suggestions.Type
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.gbif.api.model.common.DoiStatus
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.gbif.api.model.common.export.ExportFormat
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.gbif.api.model.common.messaging.Request.OperationType
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.gbif.api.model.common.messaging.Response.Status
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.gbif.api.model.common.messaging.Response.StatusCode
Returns the enum constant of this type with the specified name.
valueOf(int) - Static method in enum org.gbif.api.model.common.messaging.Response.StatusCode
 
valueOf(String) - Static method in enum org.gbif.api.model.crawler.FinishReason
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.gbif.api.model.crawler.ProcessState
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.gbif.api.model.literature.LiteratureRelevance
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.gbif.api.model.literature.LiteratureTopic
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.gbif.api.model.literature.LiteratureType
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.gbif.api.model.literature.search.LiteratureSearchParameter
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.gbif.api.model.occurrence.Download.Status
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.gbif.api.model.occurrence.DownloadFormat
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.gbif.api.model.occurrence.DownloadType
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.gbif.api.model.occurrence.geo.DistanceUnit
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.gbif.api.model.occurrence.search.InternalOccurrenceSearchParameter
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.gbif.api.model.occurrence.search.OccurrenceSearchParameter
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.gbif.api.model.pipelines.InterpretationType.RecordType
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.gbif.api.model.pipelines.PipelineStep.Status
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.gbif.api.model.pipelines.RunPipelineResponse.ResponseStatus
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.gbif.api.model.pipelines.StepRunner
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.gbif.api.model.pipelines.StepType
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.gbif.api.model.registry.eml.curatorial.CuratorialUnitType
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.gbif.api.model.registry.eml.temporal.VerbatimTimePeriodType
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.gbif.api.model.registry.EndorsementStatus
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.gbif.api.model.registry.metasync.MetasyncResult
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.gbif.api.model.registry.search.DatasetSearchParameter
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.gbif.api.util.IsoDateParsingUtils.IsoDateFormat
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.gbif.api.util.validators.identifierschemes.IdentifierScheme
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.gbif.api.vocabulary.AgentIdentifierType
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.gbif.api.vocabulary.AppRole
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.gbif.api.vocabulary.BasisOfRecord
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.gbif.api.vocabulary.CitesAppendix
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.gbif.api.vocabulary.collections.AccessionStatus
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.gbif.api.vocabulary.collections.CollectionContentType
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.gbif.api.vocabulary.collections.Discipline
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.gbif.api.vocabulary.collections.IdType
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.gbif.api.vocabulary.collections.InstitutionGovernance
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.gbif.api.vocabulary.collections.InstitutionType
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.gbif.api.vocabulary.collections.MasterSourceType
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.gbif.api.vocabulary.collections.PreservationType
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.gbif.api.vocabulary.collections.Source
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.gbif.api.vocabulary.CollectionsSortField
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.gbif.api.vocabulary.ContactType
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.gbif.api.vocabulary.Continent
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.gbif.api.vocabulary.Country
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.gbif.api.vocabulary.CountryUsageSortField
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.gbif.api.vocabulary.DatasetSubtype
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.gbif.api.vocabulary.DatasetType
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.gbif.api.vocabulary.DatasetUsageSortField
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.gbif.api.vocabulary.DistributionStatus
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.gbif.api.vocabulary.EndpointType
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.gbif.api.vocabulary.EstablishmentMeans
Deprecated.
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.gbif.api.vocabulary.Extension
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.gbif.api.vocabulary.GbifRegion
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.gbif.api.vocabulary.Habitat
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.gbif.api.vocabulary.IdentifierType
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.gbif.api.vocabulary.InstallationType
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.gbif.api.vocabulary.InterpretationRemarkSeverity
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.gbif.api.vocabulary.Kingdom
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.gbif.api.vocabulary.Language
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.gbif.api.vocabulary.License
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.gbif.api.vocabulary.LifeStage
Deprecated.
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.gbif.api.vocabulary.MaintenanceUpdateFrequency
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.gbif.api.vocabulary.MediaType
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.gbif.api.vocabulary.MetadataType
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.gbif.api.vocabulary.NamePart
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.gbif.api.vocabulary.NameType
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.gbif.api.vocabulary.NameUsageIssue
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.gbif.api.vocabulary.NodeType
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.gbif.api.vocabulary.NomenclaturalCode
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.gbif.api.vocabulary.NomenclaturalStatus
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.gbif.api.vocabulary.OccurrenceIssue
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.gbif.api.vocabulary.OccurrencePersistenceStatus
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.gbif.api.vocabulary.OccurrenceSchemaType
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.gbif.api.vocabulary.OccurrenceStatus
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.gbif.api.vocabulary.OrganizationUsageSortField
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.gbif.api.vocabulary.Origin
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.gbif.api.vocabulary.ParticipationStatus
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.gbif.api.vocabulary.PreservationMethodType
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.gbif.api.vocabulary.ProcessingErrorType
Deprecated.
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.gbif.api.vocabulary.Rank
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.gbif.api.vocabulary.RelationType
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.gbif.api.vocabulary.Sex
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.gbif.api.vocabulary.SortOrder
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.gbif.api.vocabulary.TagName
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.gbif.api.vocabulary.TagNamespace
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.gbif.api.vocabulary.TaxonomicStatus
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.gbif.api.vocabulary.TechnicalInstallationType
Deprecated.
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.gbif.api.vocabulary.ThreatStatus
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.gbif.api.vocabulary.TypeDesignationType
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.gbif.api.vocabulary.TypeStatus
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.gbif.api.vocabulary.UserRole
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.gbif.dwc.terms.AcefTerm
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.gbif.dwc.terms.AcTerm
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.gbif.dwc.terms.DcElement
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.gbif.dwc.terms.DcTerm
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.gbif.dwc.terms.DwcaTerm
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.gbif.dwc.terms.DwcTerm
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.gbif.dwc.terms.GadmTerm
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.gbif.dwc.terms.GbifInternalTerm
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.gbif.dwc.terms.GbifTerm
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.gbif.dwc.terms.IucnTerm
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.gbif.dwc.terms.PlaziTerm
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.gbif.dwc.terms.XmpRightsTerm
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.gbif.dwc.terms.XmpTerm
Returns the enum constant of this type with the specified name.
values() - Static method in enum org.gbif.api.model.checklistbank.NameUsageMatch.MatchType
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.gbif.api.model.checklistbank.search.NameUsageSearchParameter
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.gbif.api.model.checklistbank.search.NameUsageSearchRequest.NameUsageQueryField
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.gbif.api.model.collections.Batch.State
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.gbif.api.model.collections.CollectionEntityType
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.gbif.api.model.collections.lookup.Match.MatchType
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.gbif.api.model.collections.lookup.Match.Reason
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.gbif.api.model.collections.lookup.Match.Status
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.gbif.api.model.collections.suggestions.Status
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.gbif.api.model.collections.suggestions.Type
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.gbif.api.model.common.DoiStatus
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.gbif.api.model.common.export.ExportFormat
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.gbif.api.model.common.messaging.Request.OperationType
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.gbif.api.model.common.messaging.Response.Status
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.gbif.api.model.common.messaging.Response.StatusCode
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.gbif.api.model.crawler.FinishReason
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.gbif.api.model.crawler.ProcessState
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.gbif.api.model.literature.LiteratureRelevance
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.gbif.api.model.literature.LiteratureTopic
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.gbif.api.model.literature.LiteratureType
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.gbif.api.model.literature.search.LiteratureSearchParameter
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.gbif.api.model.occurrence.Download.Status
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.gbif.api.model.occurrence.DownloadFormat
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.gbif.api.model.occurrence.DownloadType
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.gbif.api.model.occurrence.geo.DistanceUnit
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.gbif.api.model.occurrence.search.InternalOccurrenceSearchParameter
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.gbif.api.model.occurrence.search.OccurrenceSearchParameter
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.gbif.api.model.pipelines.InterpretationType.RecordType
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.gbif.api.model.pipelines.PipelineStep.Status
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.gbif.api.model.pipelines.RunPipelineResponse.ResponseStatus
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.gbif.api.model.pipelines.StepRunner
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.gbif.api.model.pipelines.StepType
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.gbif.api.model.registry.eml.curatorial.CuratorialUnitType
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.gbif.api.model.registry.eml.temporal.VerbatimTimePeriodType
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.gbif.api.model.registry.EndorsementStatus
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.gbif.api.model.registry.metasync.MetasyncResult
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.gbif.api.model.registry.search.DatasetSearchParameter
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.gbif.api.util.IsoDateParsingUtils.IsoDateFormat
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.gbif.api.util.validators.identifierschemes.IdentifierScheme
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.gbif.api.vocabulary.AgentIdentifierType
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.gbif.api.vocabulary.AppRole
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.gbif.api.vocabulary.BasisOfRecord
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.gbif.api.vocabulary.CitesAppendix
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.gbif.api.vocabulary.collections.AccessionStatus
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.gbif.api.vocabulary.collections.CollectionContentType
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.gbif.api.vocabulary.collections.Discipline
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.gbif.api.vocabulary.collections.IdType
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.gbif.api.vocabulary.collections.InstitutionGovernance
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.gbif.api.vocabulary.collections.InstitutionType
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.gbif.api.vocabulary.collections.MasterSourceType
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.gbif.api.vocabulary.collections.PreservationType
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.gbif.api.vocabulary.collections.Source
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.gbif.api.vocabulary.CollectionsSortField
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.gbif.api.vocabulary.ContactType
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.gbif.api.vocabulary.Continent
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.gbif.api.vocabulary.Country
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.gbif.api.vocabulary.CountryUsageSortField
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.gbif.api.vocabulary.DatasetSubtype
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.gbif.api.vocabulary.DatasetType
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.gbif.api.vocabulary.DatasetUsageSortField
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.gbif.api.vocabulary.DistributionStatus
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.gbif.api.vocabulary.EndpointType
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.gbif.api.vocabulary.EstablishmentMeans
Deprecated.
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.gbif.api.vocabulary.Extension
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.gbif.api.vocabulary.GbifRegion
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.gbif.api.vocabulary.Habitat
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.gbif.api.vocabulary.IdentifierType
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.gbif.api.vocabulary.InstallationType
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.gbif.api.vocabulary.InterpretationRemarkSeverity
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.gbif.api.vocabulary.Kingdom
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.gbif.api.vocabulary.Language
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.gbif.api.vocabulary.License
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.gbif.api.vocabulary.LifeStage
Deprecated.
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.gbif.api.vocabulary.MaintenanceUpdateFrequency
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.gbif.api.vocabulary.MediaType
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.gbif.api.vocabulary.MetadataType
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.gbif.api.vocabulary.NamePart
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.gbif.api.vocabulary.NameType
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.gbif.api.vocabulary.NameUsageIssue
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.gbif.api.vocabulary.NodeType
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.gbif.api.vocabulary.NomenclaturalCode
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.gbif.api.vocabulary.NomenclaturalStatus
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.gbif.api.vocabulary.OccurrenceIssue
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.gbif.api.vocabulary.OccurrencePersistenceStatus
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.gbif.api.vocabulary.OccurrenceSchemaType
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.gbif.api.vocabulary.OccurrenceStatus
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.gbif.api.vocabulary.OrganizationUsageSortField
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.gbif.api.vocabulary.Origin
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.gbif.api.vocabulary.ParticipationStatus
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.gbif.api.vocabulary.PreservationMethodType
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.gbif.api.vocabulary.ProcessingErrorType
Deprecated.
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.gbif.api.vocabulary.Rank
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.gbif.api.vocabulary.RelationType
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.gbif.api.vocabulary.Sex
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.gbif.api.vocabulary.SortOrder
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.gbif.api.vocabulary.TagName
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.gbif.api.vocabulary.TagNamespace
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.gbif.api.vocabulary.TaxonomicStatus
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.gbif.api.vocabulary.TechnicalInstallationType
Deprecated.
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.gbif.api.vocabulary.ThreatStatus
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.gbif.api.vocabulary.TypeDesignationType
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.gbif.api.vocabulary.TypeStatus
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.gbif.api.vocabulary.UserRole
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.gbif.dwc.terms.AcefTerm
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.gbif.dwc.terms.AcTerm
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.gbif.dwc.terms.DcElement
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.gbif.dwc.terms.DcTerm
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.gbif.dwc.terms.DwcaTerm
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.gbif.dwc.terms.DwcTerm
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.gbif.dwc.terms.GadmTerm
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.gbif.dwc.terms.GbifInternalTerm
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.gbif.dwc.terms.GbifTerm
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.gbif.dwc.terms.IucnTerm
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.gbif.dwc.terms.PlaziTerm
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.gbif.dwc.terms.XmpRightsTerm
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.gbif.dwc.terms.XmpTerm
Returns an array containing the constants of this enum type, in the order they are declared.
VerbatimNameUsage - Class in org.gbif.api.model.checklistbank
 
VerbatimNameUsage() - Constructor for class org.gbif.api.model.checklistbank.VerbatimNameUsage
 
VerbatimOccurrence - Class in org.gbif.api.model.occurrence
An extended map holding all core terms of an occurrence record.
VerbatimOccurrence() - Constructor for class org.gbif.api.model.occurrence.VerbatimOccurrence
 
verbatimOccurrencesPersistedError(long) - Method in class org.gbif.api.model.crawler.DatasetProcessStatus.Builder
 
verbatimOccurrencesPersistedSuccessful(long) - Method in class org.gbif.api.model.crawler.DatasetProcessStatus.Builder
 
VerbatimTimePeriod - Class in org.gbif.api.model.registry.eml.temporal
A verbatim (e.g.
VerbatimTimePeriod() - Constructor for class org.gbif.api.model.registry.eml.temporal.VerbatimTimePeriod
 
VerbatimTimePeriodType - Enum in org.gbif.api.model.registry.eml.temporal
The definition of the available contact types.
VernacularName - Class in org.gbif.api.model.checklistbank
VernacularName Model Object represents a vernacular name for a scientific taxon.
VernacularName() - Constructor for class org.gbif.api.model.checklistbank.VernacularName
 
VernacularNameService - Interface in org.gbif.api.service.checklistbank
Service interface for VernacularName Interface methods.
ViafValidator - Class in org.gbif.api.util.validators.identifierschemes
 
ViafValidator() - Constructor for class org.gbif.api.util.validators.identifierschemes.ViafValidator
 
Vocabulary - Annotation Type in org.gbif.dwc.terms
Marker annotation to declare a controlled vocabulary exists in the GBIF vocabulary server.
VocabularyConcept() - Constructor for class org.gbif.api.model.event.Event.VocabularyConcept
 
VocabularyUtils - Class in org.gbif.api.util
 

W

WIKIDATA_PATTERN - Static variable in class org.gbif.api.util.IdentifierUtils
 
WikidataValidator - Class in org.gbif.api.util.validators.identifierschemes
 
WikidataValidator() - Constructor for class org.gbif.api.util.validators.identifierschemes.WikidataValidator
 
WithinPredicate - Class in org.gbif.api.model.predicate
This predicate checks if an occurrence location falls within the given WKT geometry value.
WithinPredicate(String) - Constructor for class org.gbif.api.model.predicate.WithinPredicate
Builds a new within predicate for a single, simple geometry as Well Known Text (WKT).
WorkflowStep - Class in org.gbif.api.model.pipelines
Models a step in a Pipeline workflow.
WorkflowStep() - Constructor for class org.gbif.api.model.pipelines.WorkflowStep
 

X

XmpRightsTerm - Enum in org.gbif.dwc.terms
Terms for Adobe XMP have URIs that are not resolvable.
XmpTerm - Enum in org.gbif.dwc.terms
Terms for Adobe XMP have URIs that are not resolvable.

Y

YEAR - Static variable in class org.gbif.api.model.metrics.cube.OccurrenceCube
 
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