All Classes Interface Summary Class Summary Enum Summary Exception Summary Annotation Types Summary
| Class |
Description |
| AbstractGbifUser |
An abstract GBIF user account.
|
| AccessionStatus |
Deprecated. |
| AcefTerm |
As per CoL Data Submission Format, ver.
|
| AcTerm |
All Audiovisual Core terms with namespace http://rs.tdwg.org/ac/terms/.
|
| Address |
The particulars of the place where a institution of collection is situated.
|
| Address |
|
| Address |
A package visible providing the commonality for addresses, including the constraint validations.
|
| AgentIdentifier |
|
| AgentIdentifierType |
Enumeration for user identifiers like ORCID, WIKIDATA and etc
|
| AlternativeCode |
Models a GrSciColl alternative code.
|
| AlternativeMatches |
Holds the alternative results of the collections lookup.
|
| AlternativeNames |
Optional interface for terms that have known alternative simple names the TermFactory should be aware of.
|
| AnnotationUtils |
Utility method to work with annotations.
|
| ApplySuggestionResult |
|
| AppPrincipal |
|
| AppRole |
Role(s) that can be assigned to authenticated application.
|
| BaseChangeSuggestion<T extends CollectionEntity> |
|
| BaseEntityMatched |
|
| BasePager<T> |
Iterator over registry entities from paging responses that filters out deleted entities.
|
| BaseSearchResponse |
|
| BasisOfRecord |
A simple enumeration of all DarwinCore values of BasisOfRecord legal for occurrences.
|
| BasisOfRecordSerde |
Serializer for BasisOfRecord.
|
| BasisOfRecordSerde.BasisOfRecordJsonDeserializer |
|
| BasisOfRecordSerde.BasisOfRecordJsonSerializer |
|
| Batch |
A batch that can contain either institutions or collections to create or update them in bulk.
|
| Batch.State |
|
| BatchService |
Defines the service to work with batches.
|
| BatchView |
|
| BibTexTerm |
|
| BoundingBox |
Geographic coverage geometry in the form of 4 sided bounding box.
|
| ChallengeCode |
Encapsulate a challenge code.
|
| Change |
|
| ChangeSuggestion<T extends CollectionEntity> |
|
| ChangeSuggestionService<T extends CollectionEntity,R extends ChangeSuggestion<T>> |
Defines the service to suggest changes in GRSciColl entities.
|
| ChronoTerm |
All Chronometric terms with namespace http://rs.tdwg.org/chrono/terms/.
|
| Citation |
A citation can have one or both of a textual component and an identifier which can be
of any form, but expected to be resolvable in some way such as an LSID, DOI or similar.
|
| CitationContact |
A contact used to generate a dataset citation.
|
| CitationGenerator |
|
| CitationGenerator.CitationData |
|
| CitesAppendix |
Vocabulary for the 3 CITES (Convention on International Trade in Endangered Species of Wild Fauna and Flora)
Appendix numbers.
|
| Classification |
Represents a classification of a taxon, including its usage, accepted usage,
and any issues associated with it.
|
| ClassificationUtils |
|
| Collection |
A group of specimens or other natural history objects.
|
| Collection |
Collection data for the Dataset.
|
| CollectionChangeSuggestion |
|
| CollectionContentType |
Deprecated. |
| CollectionDescriptorPager |
|
| CollectionDescriptorsSearchRequest |
|
| CollectionDescriptorVerbatimPager |
|
| CollectionEntity |
Entity .
|
| CollectionEntityService<T extends CollectionEntity> |
|
| CollectionEntityType |
|
| CollectionFacet<T extends CollectionsFacetParameter> |
|
| CollectionFacet.Count |
|
| CollectionFacetParameter |
|
| CollectionImportParams |
Contains the parameters to create a collection from a dataset.
|
| CollectionMatched |
|
| CollectionSearchRequest |
|
| CollectionSearchResponse |
Models the response for the Collection search.
|
| CollectionService |
API Service to work with collections.
|
| CollectionsFacetParameter |
|
| CollectionsFullSearchResponse |
Models the response for the Collections search.
|
| CollectionsPager |
|
| CollectionsSortField |
|
| CollectionStatusHistory |
|
| CollectionView |
|
| Comment |
|
| Commentable |
Generic comment interface for entities.
|
| CommentService |
Service provides a set of operations on Comment. |
| CommonParameters |
|
| CommonParameters.HighlightParameter |
The usual (search) limit and offset parameters
|
| CommonParameters.QParameter |
A normal full-text search parameter.
|
| CompoundPredicate |
A compound predicate is a Predicate that itself contains other Predicates.
|
| ConfirmationKeyParameter |
Confirmation key is a UUID used to confirm an entity.
|
| ConjunctionPredicate |
This predicate is "AND"-ing its subpredicates together.
|
| Constants |
Common variables used by API.
|
| Contact |
|
| Contact |
|
| Contactable |
Entity that can have a list of contacts and addresses.
|
| Contactable |
Generic contact interface for entities.
|
| ContactAdapter |
Adapt the Dataset Contact list for what metadata documents generally want. |
| ContactDetail |
|
| ContactService |
API Service for the contacts in the collections service.
|
| ContactService |
Service provides a set of operations on Contact. |
| ContactType |
Enumeration for all contact types.
|
| Continent |
|
| ConvertToCollectionParams |
|
| Country |
An enumeration for all current ISO 3166-1 Alpha-2 and Alpha-3 country codes.
|
| Country.IsoDeserializer |
Deserializes the value from a 2-letter ISO format.
|
| Country.IsoSerializer |
Serializes the value in a 2-letter ISO format.
|
| Country.TitleDeserializer |
Deserializes the value from an English country title exactly as given by the enumeration.
|
| Country.TitleSerializer |
Serializes the value as the English country title.
|
| CountryOccurrenceDownloadUsage |
Represents the information about the usage of one country in an occurrence download.
|
| CountryUsageSortField |
Fields to sort by the country usages in an occurrence download.
|
| CrawlJob |
This class represents a job to be worked on by a crawler.
|
| CrudService<T extends CollectionEntity> |
|
| CrudService<T,W,K> |
A generic CRUD service interface for any writable entity.
|
| CubeService |
The cube API service, for reading addressable counts from a basic cube.
|
| CuratorialUnit |
The base class of all curatorial units.
|
| CuratorialUnitComposite |
Composite class, combining fields from CuratorialUnitCount and CuratorialUnitRange for simpler parsing of
curatorial units, since both count and range types share the same root element.
|
| CuratorialUnitCount |
Used for acuratorial unit count with uncertainty.
|
| CuratorialUnitRange |
Used to indicate that the curatorial unit falls within a range of values.
|
| CuratorialUnitType |
Allows for typed units.
|
| DataDescription |
Describes the format of externally available data on a URL.
|
| Dataset |
A GBIF dataset which provides occurrence data, checklist data, sampling event data or metadata.
|
| Dataset.DwcA |
Metadata of dataset that has been published as a Darwin Core Archive (DwC-A).
|
| DatasetConstituentPager |
Iterates over all dataset constituents of a given super dataset.
|
| DatasetKey |
A typed dataset key for both registered and external datasets.
|
| DatasetMetrics |
Simple metrics about a single, processed checklist dataset in time.
|
| DatasetMetricsService |
|
| DatasetMixin |
|
| DatasetOccurrenceDownloadUsage |
Represents the information about the usage of one dataset in an occurrence download.
|
| DatasetOccurrenceDownloadUsageService |
Interface to access and persists information about occurrence download events.
|
| DatasetOccurrenceDownloadUsagesPager |
|
| DatasetPager |
Pages through all datasets filtering by type only.
|
| DatasetProcessService |
This service exposes information regarding current crawling process and is not intended to provide historical
information.
|
| DatasetProcessStatus |
Information about a dataset that is currently being processed.
|
| DatasetProcessStatus.Builder |
|
| DatasetProcessStatusService |
Interface to access and persist information about dataset processing statuses.
|
| DatasetRequestSearchParams |
Parameters to list datasets.
|
| DatasetSearchParameter |
Each value in the enum represents a possible facet for the Dataset search.
|
| DatasetSearchRequest |
A dataset specific search request with convenience methods to add facet filters.
|
| DatasetSearchResult |
The dataset search model object for faceted and full text search.
|
| DatasetSearchResultsPager |
Pages through all datasets search results.
|
| DatasetSearchService |
Interface that provides search and suggest operations over Datasets.
|
| DatasetService |
|
| DatasetSubtype |
Enumeration for all possible dataset subtypes.
|
| DatasetSuggestRequest |
A dataset specific suggest request.
|
| DatasetSuggestResult |
The dataset search model object for suggest searches of datasets.
|
| DatasetType |
Enumeration for all possible dataset types.
|
| DatasetUsageSortField |
Fields to sort by the dataset usages in an occurrence download.
|
| DateRange |
A period of time.
|
| DateSerde |
Jackson JsonSerializer classes for Dates with specified formats. |
| DateSerde.FlexibleDateJsonDeserializer |
Jackson JsonDeserializer for Dates formatted above, falling back to the Jackson way. |
| DateSerde.NoTimezoneDateJsonSerializer |
Jackson JsonSerializer for Date. |
| DcElement |
All Dublin Core terms with namespace http://purl.org/dc/elements/1.1/.
|
| DcTerm |
All Dublin Core terms with namespace http://purl.org/dc/terms/.
|
| Description |
Description Model Object represents a taxon description.
|
| DescriptionService |
Service interface for Description Interface methods.
|
| Descriptor |
|
| DescriptorChangeSuggestion |
Domain model representing a change suggestion for a descriptor.
|
| DescriptorChangeSuggestionRequest |
|
| DescriptorChangeSuggestionService |
Service interface for managing descriptor change suggestions in collections.
|
| DescriptorGroup |
|
| DescriptorGroupSearchRequest |
|
| DescriptorIssue |
|
| DescriptorMatch |
|
| DescriptorSearchRequest |
|
| DescriptorSearchRequest.CustomBuilder |
|
| DescriptorSearchRequest.DescriptorSearchRequestBuilder |
|
| DescriptorsService |
API service to work with collection descriptors.
|
| DescriptorValidationResult |
Result class for descriptor vocabulary validation that allows graceful handling
of invalid values by leaving fields blank rather than failing the entire operation.
|
| Dimension<T> |
A typed dimension to a cube, which is constructed with a unique key.
|
| Discipline |
Deprecated. |
| DisjunctionPredicate |
This predicate is "OR"-ing its subpredicates together.
|
| DistanceUnit |
The DistanceUnit enumerates several units for measuring distances.
|
| DistanceUnit.Distance |
|
| DistanceUnit.GeoDistance |
|
| Distribution |
Distribution Model Object represents a species distribution.
|
| DistributionService |
Service interface for Distribution Interface methods.
|
| DistributionStatus |
A statement about the presence or absence of a Taxon at a Location.
|
| DnaUtils |
|
| DOI |
Class representing a single Digital Object Identifier (DOI) breaking it down to a prefix and suffix.
|
| DOI.DoiDeserializer |
|
| DOI.DoiSerializer |
|
| DoiData |
Data about a DOI with a target URI and a status enumeration.
|
| DoiStatus |
This enumeration represents the status of a DOI identifier.
|
| Download |
|
| Download.Status |
Reflects the possibles statuses of a download during its execution.
|
| DownloadFormat |
Download output requested format.
|
| DownloadLauncherService |
|
| DownloadRequest |
Represents a request to download occurrence records.
|
| DownloadRequestSerde |
Download request deserializer.
|
| DownloadRequestService |
Provides services to manage download requests and retrieve the download file.
|
| DownloadStatisticPager |
|
| DownloadStatistics |
Monthly dataset download statistics.
|
| DownloadType |
Defines the type of citable data download.
|
| Duplicate |
Models a duplicate in GRSciColl.
|
| DuplicatesRequest |
Request to be used for the GRSciColl API duplicates services.
|
| DuplicatesResult |
Result to be used for the GRSciColl API duplicates services.
|
| DwcaTerm |
Darwin Core Archive terms with namespace http://rs.tdwg.org/dwc/text/.
|
| DwcaValidationReport |
A report of the validity of a DwC-A.
|
| DwcModule |
|
| DwcTerm |
All Darwin Core terms with namespace http://rs.tdwg.org/dwc/terms/ as an
enumeration with alternative term names found sometimes in data.
|
| EmailConstraintValidator |
ConstraintValidator that validates emails.
|
| EmptyToNull |
Indicates that the field is suitable to convert empty strings into null.
|
| EmptyToNullUriDeserializer |
|
| EndorsementStatus |
|
| Endpoint |
|
| Endpointable |
Generic endpoint interface for entities.
|
| EndpointCreatedComparator |
An ordering that uses the created date of an endpoint for ordering.
|
| EndpointPriorityComparator |
Compares two Endpoints.
|
| EndpointService |
Service provides a set of operations on Endpoint. |
| EndpointType |
Enumeration for all endpoint types.
|
| EntityMatched |
|
| EntityWithLogoMixin |
|
| EqualsPredicate<S extends SearchParameter> |
This predicate checks if its key is equal to its value.
|
| EstablishmentMeans |
Deprecated. |
| Event |
Event class based on https://dwc.tdwg.org/terms/#event.
|
| Event.ParentLineage |
|
| Event.VocabularyConcept |
|
| ExifTerm |
All Adobe EXIF terms with namespace http://ns.adobe.com/exif/1.0/.
|
| Experimental |
Experimental features are available but are not as robustly supported as other features.
|
| ExportFormat |
Supported export formats.
|
| ExtendedPrincipal |
Simply an extension of Principal to add the possibility to check roles. |
| Extension |
Enumeration of dwc extensions for both Occurrence and Taxon that are indexed by GBIF.
|
| ExtensionDeserializer |
|
| ExtensionKeyDeserializer |
|
| ExtensionKeySerializer |
|
| ExtensionSerializer |
|
| Facet<T extends SearchParameter> |
Represents a clustering of search results into categories.
|
| Facet.Count |
Nested class that represents the count of each category.
|
| FacetedSearchRequest<F extends CollectionsFacetParameter> |
|
| FacetedSearchRequest<P extends SearchParameter> |
Generic request class for search operations requesting facets.
|
| FacetedSearchRequest.FacetParameters |
Annotation to document the facet query parameters.
|
| FacetedSearchResponse<T,F extends CollectionsFacetParameter> |
|
| FinishReason |
This enum lists the reasons why a crawl is finished.
|
| Format |
|
| FullTextSearchPredicate |
This predicate checks performs a full text search based on a query parameter.
|
| Gadm |
GADM level.
|
| GadmFeature |
|
| GadmTerm |
|
| GbifDnaTerm |
Terms defined in the DNA extension.
|
| GbifInternalTerm |
Internal GBIF terms used for processing, fragmenting, crawling, ...
|
| GbifMiqeTerm |
Terms defined in the DNA extension.
|
| GbifRegion |
An enumeration for all GBIF Regions.
|
| GbifTerm |
|
| GbifUser |
A GBIF user account registered in the user Identity database (previously Drupal).
|
| GbifUserPrincipal |
A wrapper class for a GBIF User that exposes the unique account name as the principal name.
|
| Generated |
Annotation that marks a method as a 'generated' one.
|
| GenericValidationReport |
A container class used to capture the information necessary for a generic validation report.
|
| GeoDistancePredicate |
This predicate checks if an occurrence location falls within a distance of a location.
|
| GeographicContext |
|
| Geometry |
General interface for all geometries such as polygons or bounding boxes.
|
| GeospatialCoverage |
|
| GermplasmTerm |
All Germplasm terms with namespace http://purl.org/germplasm/germplasmTerm#.
|
| GgbnTerm |
All GGBN terms with namespace http://data.ggbn.org/schemas/ggbn/terms/.
|
| GreaterThanOrEqualsPredicate<S extends SearchParameter> |
This predicate checks if its key is greater than or equal its value.
|
| GreaterThanPredicate<S extends SearchParameter> |
This predicate checks if its key is greater than its value.
|
| Grid |
|
| GrSciCollUtils |
|
| Habitat |
Very coarse habitat vocabulary matching the boolean biome flags found in the species profile extension.
|
| Highlight |
|
| HttpURI |
Validates that the URI field is absolute, beginning with either http or https.
|
| HuhValidator |
|
| Identifiable |
Generic identifier interface for entities.
|
| Identifier |
|
| Identifier |
Identifier Model Object represents an alternative identifier for an occurrence or name usage.
|
| Identifier |
|
| IdentifierScheme |
|
| IdentifierSchemeValidator |
Validation and normalization interface for identifier schemes.
|
| IdentifierService |
Service interface for Identifier methods.
|
| IdentifierService |
Service provides a set of operations on Identifier. |
| IdentifierType |
Enumeration for all possible identifier types.
|
| IdentifierUtils |
This class contains utility methods for identifiers.
|
| IdentityAccessService |
Identity service accessing a single user, in read-only.
|
| IdType |
ID type for user IDs in GRSciColl contacts.
|
| IhIrnValidator |
|
| IngestionHistoryService |
|
| IngestionProcess |
|
| InPredicate<S extends SearchParameter> |
This predicate checks if its key contains any of its values.
|
| Installation |
A technical installation which can serve datasets.
|
| InstallationPager |
Iterates over all datasets hosted by a given installation.
|
| InstallationRequestSearchParams |
|
| InstallationService |
|
| InstallationType |
Enumeration for all possible installation types.
|
| Institution |
The owner or location of collection.
|
| InstitutionChangeSuggestion |
|
| InstitutionFacetedSearchRequest |
|
| InstitutionFacetParameter |
|
| InstitutionGovernance |
Deprecated. |
| InstitutionImportParams |
Contains the parameters to create an institution from an organization.
|
| InstitutionMatched |
|
| InstitutionSearchRequest |
|
| InstitutionSearchResponse |
|
| InstitutionService |
Service for institutions in the collections context.
|
| InstitutionsPager |
|
| InstitutionType |
Deprecated. |
| InternalOccurrenceSearchParameter |
Query parameters used internally (not part of the public API) to support complex data types.
|
| InterpretationRemark |
Represents a remark flagged during the interpretation phase.
|
| InterpretationRemarkSeverity |
Severity of an InterpretationRemark.
|
| InterpretationType |
Enum to represent the pipelines internal interpretation type steps.
|
| InterpretationType.RecordType |
|
| InterpretedEnum<V,I extends Enum<I>> |
Deprecated. |
| InterpretedField<V,I> |
Deprecated. |
| IptcTerm |
All International Press Telecommunications Council terms with namespace http://iptc.org/std/Iptc4xmpExt/2008-02-29/.
|
| IsniValidator |
Validator for ISNI numbers.
|
| IsNotNullPredicate<S extends SearchParameter> |
|
| IsNullPredicate<S extends SearchParameter> |
|
| IsoDateInterval |
Represents an ISO 8601:2019 date, date-time or date/date-time interval.
|
| IsoDateIntervalSerde |
Jackson JsonSerializer classes for IsoDateIntervals with specified formats. |
| IsoDateIntervalSerde.IsoDateIntervalDeserializer |
Jackson JsonDeserializer for IsoDateIntervals formatted above, falling back to the Jackson way. |
| IsoDateIntervalSerde.IsoDateIntervalSerializer |
|
| IsoDateParsingUtils |
Utility class that parses date values, the allowed date formats are: "yyyy-MM-dd", "yyyy-MM" or "yyyy".
|
| IsoDateParsingUtils.IsoDateFormat |
Enumerations with the allowed date formats by the occurrence search service.
|
| Iterables |
Factory constructing registry entity iterables using specific pagers under the hood.
|
| IucnTerm |
|
| KeyCodeNameResult |
A utility container for holding the key, code and name of an entity.
|
| KeyTitleResult |
A utility container for holding only the title and key of an entity.
|
| KeywordCollection |
Allows a collection of keywords which may declare a thesaurus from which they come from.
|
| Keywords |
|
| Kingdom |
Deprecated. |
| Language |
Enumeration for all ISO 639-1 language codes using 2 lower case letters.
|
| Language.IsoKeySerializer |
|
| Language.IsoSerializer |
Serializes the value in a 3 letter ISO format.
|
| Language.LenientDeserializer |
Deserializes the value from a 3 letter ISO format or the enumeration name itself to maintain as
much backwards compatibility as possible with e.g.
|
| Language.LenientKeyDeserializer |
|
| LengthUtils |
|
| LenientEquals<T> |
An interface to allow model objects to offer a consistent lenient equality check.
|
| LenientEqualsUtils |
|
| LessThanOrEqualsPredicate<S extends SearchParameter> |
This predicate checks if its key is less or equal than its value.
|
| LessThanPredicate<S extends SearchParameter> |
This predicate checks if its key is less than its value.
|
| License |
Enumeration of the set of licenses GBIF supports for applying to a dataset.
|
| LicenseMixin |
Mixin interface used to serialize license enums into urls.
|
| LicenseSerde |
Jackson JsonSerializer and Jackson JsonDeserializer classes for License. |
| LicenseSerde.LicenseJsonDeserializer |
Jackson JsonDeserializer for License. |
| LicenseSerde.LicenseJsonSerializer |
Jackson JsonSerializer for License. |
| LifeStage |
Deprecated. |
| LikePredicate<S extends SearchParameter> |
This predicate checks if its key is LIKE its value.
|
| Lineage |
Lineage class to represent relations between events.
|
| LinneanClassification |
A flat taxonomic classification using the major, Linnean ranks with verbatim names.
|
| LinneanClassificationKeys |
Deprecated. |
| LiteratureRelevance |
|
| LiteratureSearchParameter |
|
| LiteratureSearchRequest |
|
| LiteratureSearchResult |
|
| LiteratureTopic |
|
| LiteratureType |
|
| LocalDateTimeSerDe |
Jackson JsonSerializer and Jackson JsonDeserializer classes for LocalDateTime. |
| LocalDateTimeSerDe.LocalDateTimeDeserializer |
|
| LocalDateTimeSerDe.LocalDateTimeSerializer |
|
| LookupParams |
Holds the parameters that the collections lookup accepts.
|
| LookupResult |
Result of a collections lookup that contains the institution and collections matches found.
|
| MachineTag |
A tag that has a namespace, name and a value.
|
| MachineTaggable |
Generic machine tag interface for entities.
|
| MachineTagService |
Service provides a set of operations on MachineTag. |
| MachineTagUtils |
Utility class to simplify your life when dealing with machine tags.
|
| MaintenanceChange |
A description of single changes made to the data.
|
| MaintenanceUpdateFrequency |
Enumeration for describing the frequency with which changes and additions are made to the dataset after the initial
dataset is completed.
|
| MapEntrySerde |
Deprecated. |
| MapEntrySerde.MapEntryJsonDeserializer |
Deprecated. |
| MapEntrySerde.MapEntryJsonSerializer |
Deprecated. |
| MasterSourceMetadata |
Metadata to sync GRSciColl entities with their master sources.
|
| MasterSourceType |
Type of GRSciColl master source.
|
| Match<T extends EntityMatched> |
Used in the LookupResult to express how good an entity matches. |
| Match.MatchType |
|
| Match.Reason |
|
| Match.Status |
|
| MeasurementOrFact |
|
| MeasurementOrFact |
A measurement or fact about an occurrence.
|
| MediaObject |
Metadata for a multimedia object representing an image, video or audio file.
|
| MediaType |
|
| MergeParams |
|
| Metadata |
|
| MetadataType |
Enumeration for all possible metadata types.
|
| MetasyncHistory |
Metadata synchronization historical information.
|
| MetasyncHistoryService |
Interface to access and persists historical metadata synchronization results.
|
| MetasyncResult |
Enumeration of all the different categories of results we want to report on during metadata synchronisation.
|
| Mixins |
Mixins are typically used to leave serialization-oriented annotations outside the models to avoid
introducing coupling on a specific SerDe.
|
| MixsTerm |
All GenSC (Genomics Standards Consortium) Minimum Information about any Sequence (MIxS) terms
with namespace https://w3id.org/mixs/ or https://w3id.org/gensc/terms/MIXS:.
|
| Mod112 |
Util class that generates a validates Mod11,2 checksums.
|
| MultimediaService |
The public interface providing methods for retrieving NameUsageMediaObjects.
|
| NameParser |
Interface for parsing scientific names.
|
| NamePart |
Deprecated. |
| NameType |
Deprecated. |
| NameUsage |
Deprecated. |
| NameUsageContainer |
An extension to a NameUsage adding all further properties that are not eagerly loaded.
|
| NameUsageExtension |
|
| NameUsageExtensionService<T> |
Parameterized service interface for model classes extending a NameUsage.
|
| NameUsageIssue |
Enumeration of issues for each name usage record encountered during checklist processing.
|
| NameUsageMatch |
The resulting lookup of a name usage match.
|
| NameUsageMatch.MatchType |
|
| NameUsageMediaObject |
An extension to the common MediaObject that adds a source taxon key property from checklistbank.
|
| NameUsageMetrics |
Basic metrics for a single name usage.
|
| NameUsageSearchParameter |
Each value in the enum represents a search parameter or facet of the name usage search.
|
| NameUsageSearchRequest |
A name usage specific search request with convenience methods to add enum based search filters.
|
| NameUsageSearchRequest.NameUsageQueryField |
|
| NameUsageSearchResult |
Class used for returning results of a full text search operation.
|
| NameUsageSuggestRequest |
A name usage specific suggest request.
|
| NameUsageSuggestResult |
Class used for returning results of a suggest operation.
|
| Network |
A GBIF network.
|
| NetworkEntity |
This interface provides a minimal contract that all network entities (The readable version) will adhere to.
|
| NetworkEntityService<T> |
|
| NetworkMixin |
|
| NetworkPager |
Iterates over all datasets belonging to a given network.
|
| NetworkRequestSearchParams |
|
| NetworkService |
|
| Node |
A GBIF participant node.
|
| NodeDatasetPager |
Pages through all datasets endorsed by a given node.
|
| NodeMixin |
|
| NodeOrganizationPager |
Pages through all organizations endorsed by a given node.
|
| NodePager |
Pages through all organizations optionally filtering by country.
|
| NodeRequestSearchParams |
|
| NodeService |
Actions on a GBIF node.
|
| NodeType |
Enumeration for all possible node types.
|
| NomenclaturalCode |
Deprecated. |
| NomenclaturalStatus |
Vocabulary for the nomenclatural status of a name.
|
| NotPredicate |
This predicate negates its subpredicate.
|
| NullToNotFound |
Annotation that marks a resource method to throw a NotFoundException (becomes http 404)
when null is returned by the method.
|
| ObisTerm |
All OBIS terms with namespace http://rs.iobis.org/obis/terms/.
|
| ObjectClassification |
|
| ObjectGroup |
|
| Occurrence |
Represents an Occurrence as interpreted by GBIF, adding typed properties on top of the verbatim ones.
|
| OccurrenceCountryIndexService |
Supports the listing of countries having occurrence records.
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| OccurrenceCube |
The occurrence cube dimension definitions and the way in which they are rolled up into counts.
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| OccurrenceDatasetIndexService |
Supports the listing of datasets having occurrence records.
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| OccurrenceDistributionIndexService |
Supports listing occurrence counts by known dimensions.
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| OccurrenceDownloadService |
Interface to access and persist information about occurrence download events.
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| OccurrenceIssue |
An enumeration of validation rules for single occurrence records.
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| OccurrenceMappeable |
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| OccurrenceMapping |
Models the mapping of a GRSciColl institution or collection to an occurrence record.
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| OccurrenceMappingService |
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| OccurrenceMixin |
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| OccurrencePersistenceStatus |
These are the possible states of an Occurrence as it moves through the processing and persistence chain. |
| OccurrencePredicateSearchRequest |
Search request that uses a predicate filter like the ones used un downloads.
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| OccurrenceRelation |
Occurrence relations based on the dwc:ResourceRelationship model.
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| OccurrenceSchemaType |
The slightly simplified standard schemas that a crawled occurrence record could be built in.
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| OccurrenceSearchParameter |
Supported query parameters by the occurrence search and download service.
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| OccurrenceSearchParameter.OccurrenceSearchParameterDeserializer |
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| OccurrenceSearchParameter.OccurrenceSearchParameterKeyDeserializer |
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| OccurrenceSearchRequest |
Request class for issuing search request to the occurrence search service.
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| OccurrenceSearchService |
Interface that provides search operations over Occurrences.
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| OccurrenceService |
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| OccurrenceStatus |
A statement about the presence or absence of an occurrence at a location at a time.
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| OccurrenceValidationReport |
The rules followed here should match the document at:
http://dev.gbif.org/wiki/display/INT/Identifier+problems+and+how+to+solve+them.
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| OrcidValidator |
Validator for Orcid identifiers.
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| OrganisationalUnit |
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| Organization |
A GBIF data publisher.
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| OrganizationContactView |
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| OrganizationMixin |
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| OrganizationOccurrenceDownloadUsage |
Represents the information about the usage of one organization in an occurrence download.
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| OrganizationPager |
Pages through all organizations optionally filtering by country.
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| OrganizationRequestSearchParams |
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| OrganizationService |
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| OrganizationUsageSortField |
Fields to sort by the organization usages in an occurrence download.
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| OrgHostingPager |
Iterates over all datasets hosted by a given organisation.
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| OrgPublishingPager |
Iterates over all datasets published by a given organisation.
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| Origin |
Enumeration to classify name usages by how they originated.
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| OtherValidator |
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| Pageable |
Most simple paging interface for both request and responses.
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| Pageable.OffsetLimitParameters |
The usual (search) limit and offset parameters
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| PageableBase |
Generically is a class that contains attributes used by operations that are aware of pagination.
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| PagingConstants |
Paging constants.
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| PagingRequest |
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| PagingResponse<T> |
Paging response bean.
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| ParamName |
Overrides parameter name when a form param name does not match a method param name.
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| ParsedName |
A container of a taxon name that is atomised into its relevant, separate parts.
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| ParsedNameService |
ChecklistBank service dealing with parsed names.
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| PartialDate |
This annotation is used to mark Date parameter that can accept partial dates as input.
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| ParticipationStatus |
Enumeration for all of GBIF's participation statuses.
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| Person |
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| PersonRole |
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| PhotoshopTerm |
All Adobe Photoshop terms with namespace http://ns.adobe.com/photoshop/1.0/.
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| PipelineExecution |
Models an execution of a pipeline that can include one or more steps.
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| PipelineProcess |
Models a pipeline process for a specific dataset and attempt.
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| PipelineProcessParameters |
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| PipelinesHistoryService |
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| PipelineStep |
Models a step in pipelines.
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| PipelineStep.MetricInfo |
Inner class to store metrics.
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| PipelineStep.Status |
Enum to represent the status of a step.
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| PipelinesWorkflow |
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| PipelinesWorkflow.Graph<T> |
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| PlaziTerm |
Terms used in DwC archives from https://plazi.org
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| Point |
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| Polygon |
A simple polygon made out of a list of points to be joined.
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| PostPersist |
A marker intended for validation annotations indicating that the rule should be applied for entites before they have
been persisted.
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| PreconditionUtils |
Analogues of methods from guava's Preconditions
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| Predicate |
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| PredicateDownloadRequest |
An occurrence download request whose filters are based on predicates ( see Predicate). |
| PrePersist |
A marker intended for validation annotations indicating that the rule should be applied for entites before they have
been persisted.
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| PreservationMethodType |
The definition of the available preservation method types (the method used to preserve specimens).
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| PreservationType |
Deprecated. |
| PrimaryIdentifierService |
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| ProcessingErrorType |
Deprecated. |
| ProcessState |
This enum lists the state of an occurrence or checklist crawl.
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| Project |
A dataset can be part of a project.
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| ProjectAward |
ProjectAward is used to enter information about a funding award associated with a project.
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| QueryBuildingException |
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| QueryVisitor |
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| Range<T extends Comparable<? super T>> |
Simplified version of guava's Range.
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| RangePredicate<S extends SearchParameter> |
This predicate checks if its key is within the range value.
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| RangeValue |
A range used for predicates allowing including or excluding the end values.
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| Rank |
Deprecated. |
| RankedName |
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| RankSerde |
Jackson JsonSerializer and Jackson JsonDeserializer classes for Rank that uses the common rank markers instead of enum names. |
| RankSerde.RankJsonDeserializer |
Jackson JsonDeserializer for Rank. |
| RankSerde.RankJsonSerializer |
Jackson JsonSerializer for Rank. |
| ReadBuilder |
Provides building of addresses for reading the cube.
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| RecordError |
Deprecated. |
| RecordError.Builder |
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| Reference |
Reference Model Object represents a literature reference stating a bibliography for a taxon.
|
| Reference |
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| ReferenceService |
Service interface for Reference Interface methods.
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| RelatedProject |
A dedicated class for related projects.
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| RelationType |
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| Request<T> |
Class that represents a generic invocation of operation.
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| Request.Builder<T> |
Builder class for Request instances. |
| Request.OperationType |
CRUD operation types.
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| RequestSearchParams |
Base class for registry requests to list the entities.
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| ResearcherIdValidator |
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| ResourceRelationship |
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| Response<T> |
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| Response.Builder<T> |
Builder for Response objects.
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| Response.Status |
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| Response.StatusCode |
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| ResponseChain<T,R> |
Response that can contain a list of related responses.
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| Role |
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| Rollup |
A rollup defines an addressable count that is maintained for a set of dimensions.
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| RunAllParams |
Encapsulates the params to pass in the body for the runAll method.
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| RunPipelineResponse |
Encapsulates the possible response of the request of re-execute a pipeline of dataset and
attempt.
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| RunPipelineResponse.Builder |
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| RunPipelineResponse.ResponseStatus |
Possible response statuses.
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| SamplingDescription |
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| SearchConstants |
Contains common search constants.
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| SearchParameter |
Interface to be implemented by all search parameter enumerations.
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| SearchRequest |
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| SearchRequest<P extends SearchParameter> |
Generic request class for search operations.
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| SearchRequest.QueryField |
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| SearchResponse<T,P extends SearchParameter> |
Generic response of a search operation.
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| SearchResult |
Models a flat response of a pipeline process search.
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| SearchService<T,P extends SearchParameter,R extends SearchRequest<P>> |
Parameterized generic search interface that supports pagination.
|
| SearchTypeValidator |
Utility class to do basic validation of all search enum based values.
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| ServiceUnavailableException |
An unchecked exception that indicates that the service is not available.
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| Sex |
Deprecated. |
| SimplePredicate<S extends SearchParameter> |
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| SingleDate |
A single instance in time.
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| SortOrder |
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| Source |
Sources for GRSciColl.
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| Sourceable |
Annotation to indicate that a field can be populated from external sources.
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| SourceableField |
Holds the info about the GRSciColl fields whose master source is outside GRSciColl.
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| SourceableField.Source |
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| Sourceables |
Container annotation for multiple Sourceable annotations. |
| SpeciesProfile |
SpeciesProfile Model Object represents a species profile which describes basic species characteristics.
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| SpeciesProfileService |
Service interface for SpeciesProfile Interface methods.
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| SpellCheckResponse |
Contains the response information of a spell check request.
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| SpellCheckResponse.Suggestion |
Information about a suggestion made for possible correct spelled version of a search term.
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| SqlDownloadFunction |
Custom functions supported by the SQL download API.
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| SqlDownloadRequest |
SQL Based downloads — experimental feature.
|
| Status |
|
| StepRunner |
General runners, STANDALONE - run an app using local resources, DISTRIBUTED - run an app using
YARN cluster.
|
| StepType |
Enum to represent the pipelines step names.
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| SuggestService<T,P extends Enum<?> & SearchParameter,R extends SearchRequest<P>> |
Generic search interface for a suggest/autocomplete service.
|
| TableOfContents |
A simple class to represent a table of contents for multiple languages.
|
| Tag |
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| Taggable |
Generic tag interface for entities.
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| TagName |
|
| TagNamespace |
Known namespaces for tags.
|
| TagService |
Service provides a set of operations on Tag. |
| TaxonomicCoverage |
An individual coverage.
|
| TaxonomicCoverages |
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| TaxonomicStatus |
The taxonomic status of a taxon.
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| TechnicalInstallationType |
Deprecated.
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| TemporalCoverage |
The base of all types of temporal coverages.
|
| TemporalCoverageFormatterVisitor |
Allows formatter to be dynamically selected based on the concrete type of TemporalCoverage at runtime.
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| Term |
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| TermComparator |
Compares terms by their qualified name.
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| TermDeserializer |
A json deserializer that turns full qualified term names into dwc terms instances.
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| TermFactory |
Simple, threadsafe factory for terms that knows about all ConceptTerms of this library and keeps singletons for
all unknown Term instances.
|
| TermKeyDeserializer |
|
| TermKeySerializer |
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| TermMapListDeserializer |
Deprecated. |
| TermMapListSerializer |
Deprecated. |
| Terms |
|
| TermSerializer |
A json serializer that turns dwc terms into their full qualified term name.
|
| ThreatStatus |
The IUCN threat status.
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| Trim |
Indicates that the field is suitable for String trimming.
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| Type |
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| TypeDesignationType |
A vocabulary to be used for reasons for a type designation of a specimen or name.
|
| TypeSpecimen |
TypeSpecimen Model originally designed for both specimens and types, including type specimens, type species and type genera and simple
specimens unrelated to types.
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| TypeSpecimenService |
Service interface for TypeSpecimen Interface methods.
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| TypeStatus |
Deprecated. |
| UnicodeUtils |
Utilities dealing with unicode strings
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| UnknownTerm |
|
| UnparsableException |
Exception thrown when a scientific name cannot be parsed.
|
| URIValidator |
Constrain validator that validates URI objects with a @HttpURI annotation.
|
| Usage |
|
| User |
Deprecated.
|
| UserId |
User ID for GRSciColl contacts.
|
| UserPrincipal |
Deprecated.
|
| UserRole |
Roles here shall not be defined in AppRole (validated by unit test). |
| UserService |
Deprecated. |
| ValidEmail |
Annotation to indicate that an email has to be valid.
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| VerbatimNameUsage |
|
| VerbatimOccurrence |
An extended map holding all core terms of an occurrence record.
|
| VerbatimTimePeriod |
A verbatim (e.g.
|
| VerbatimTimePeriodType |
The definition of the available contact types.
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| VernacularName |
VernacularName Model Object represents a vernacular name for a scientific taxon.
|
| VernacularNameService |
Service interface for VernacularName Interface methods.
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| ViafValidator |
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| Vocabulary |
Marker annotation to declare a controlled vocabulary exists in the GBIF vocabulary server.
|
| VocabularyUtils |
|
| Wgs84GeoPositioningTerm |
All WGS84 Geo Positioning terms with namespace http://www.w3.org/2003/01/geo/wgs84_pos#
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| WikidataValidator |
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| WithinPredicate |
This predicate checks if an occurrence location falls within the given WKT geometry value.
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| WorkflowStep |
Models a step in a Pipeline workflow.
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| XmpRightsTerm |
Terms for Adobe XMP have URIs that are not resolvable.
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| XmpTerm |
Terms for Adobe XMP have URIs that are not resolvable.
|