org.gbif.api.model.checklistbank

Class Reference

java.lang.Object

org.gbif.api.model.checklistbank.Reference

All Implemented Interfaces:

NameUsageExtension

public class Reference
extends Object
implements NameUsageExtension

Reference Model Object represents a literature reference stating a bibliography for a taxon. Since the initial release of the GBIF API version 1.0 ChecklistBank has been modified to only store the entire citation string of a reference and none of the atomised fields which are now deprecated.

See Also:

Reference Definition

Constructor Summary

Constructors

Constructor and Description
Reference()

Method Summary

Modifier and Type	Method and Description
boolean	equals(Object o)
String	getAuthor() Deprecated.
@NotNull String	getCitation() A text string referring to an un-parsed bibliographic citation.
String	getDate() Deprecated.
String	getDoi() The pure DOI for the publication without potential http resolver or URI prefix.
String	getLink() Link.
String	getRemarks() Annotation of taxon-specific information related to the referenced publication.
String	getSource()
Integer	getSourceTaxonKey() If the source is another name usage this is the taxonKey of that usage.
Integer	getTaxonKey() The name usage "taxon" key this description belongs to.
String	getTitle() Deprecated.
String	getType() Used to assign a bibliographic reference to list of taxonomic or nomenclatural categories.
int	hashCode()
void	setAuthor(String author) Deprecated.
void	setCitation(String citation)
void	setDate(String date) Deprecated.
void	setDoi(String doi)
void	setLink(String link)
void	setRemarks(String remarks)
void	setSource(String source)
void	setSourceTaxonKey(Integer sourceTaxonKey)
void	setTaxonKey(Integer taxonKey)
void	setTitle(String title) Deprecated.
void	setType(String type)
String	toString()

Methods inherited from class java.lang.Object

getClass, notify, notifyAll, wait, wait, wait

Constructor Detail

Reference

public Reference()

Method Detail

getTaxonKey

public Integer getTaxonKey()

The name usage "taxon" key this description belongs to.

Specified by:

getTaxonKey in interface NameUsageExtension

setTaxonKey

public void setTaxonKey(Integer taxonKey)

Specified by:

setTaxonKey in interface NameUsageExtension

getAuthor

@Nullable
 @Deprecated
public String getAuthor()

Deprecated.

The author or authors of the referenced work.

Example: Patricia Hartge.

Returns:

the author

setAuthor

@Deprecated
public void setAuthor(String author)

Deprecated.

Parameters:

author - the author to set

getCitation

@NotNull
public @NotNull String getCitation()

A text string referring to an un-parsed bibliographic citation. The full citation given here should include all the details potentially found in the other atomised fields, i.e. includes authorship, title, etc.

Example: Hartge, P., Genetics of reproductive lifespan. Nature Genetics 41, 637 - 638 (2009).

Returns:

the citation

setCitation

public void setCitation(String citation)

Parameters:

citation - the citation to set

getDate

@Nullable
 @Deprecated
public String getDate()

Deprecated.

Date of publication, recommended ISO format YYYY or YYYY-MM-DD.

Returns:

the publication date

setDate

@Deprecated
public void setDate(String date)

Deprecated.

getDoi

@Nullable
public String getDoi()

The pure DOI for the publication without potential http resolver or URI prefix. For example 10.1038/ng0609-637 instead of doi:10.1038/ng0609-637 or http://dx.doi.org/10.1038/ng0609-637. A valid DOI always starts with 10..

Returns:

the doi

See Also:

Crossref DOI Info, DOI Handbook, Wikipedia

setDoi

public void setDoi(String doi)

getLink

@Nullable
public String getLink()

Link.

Returns:

the link

setLink

public void setLink(String link)

Parameters:

link - the link to set

getRemarks

@Nullable
public String getRemarks()

Annotation of taxon-specific information related to the referenced publication.

Examples: "transferred H. nigritarsus to Acanolonia"; "Type specimen is a skeleton"

Returns:

the taxonomic remarks

setRemarks

public void setRemarks(String remarks)

getTitle

@Nullable
 @Deprecated
public String getTitle()

Deprecated.

Title of book or article.

Example: "Genetics of reproductive lifespan", "Field Guide to Moths of Eastern North America".

Returns:

the title

setTitle

@Deprecated
public void setTitle(String title)

Deprecated.

Parameters:

title - the title to set

getType

@Nullable
public String getType()

Used to assign a bibliographic reference to list of taxonomic or nomenclatural categories. Best practice is to use a controlled vocabulary.

Examples: Original publication of new combination (comb nov.)

Returns:

the publication type

setType

public void setType(String type)

getSource

@Nullable
public String getSource()

Specified by:

getSource in interface NameUsageExtension

Returns:

a source reference string

setSource

public void setSource(String source)

Specified by:

setSource in interface NameUsageExtension

getSourceTaxonKey

@Nullable
public Integer getSourceTaxonKey()

Description copied from interface: NameUsageExtension

If the source is another name usage this is the taxonKey of that usage. Only useful for the backbone dataset.

Specified by:

getSourceTaxonKey in interface NameUsageExtension

Returns:

The key of the name usage this instance is derived from.

setSourceTaxonKey

public void setSourceTaxonKey(Integer sourceTaxonKey)

Specified by:

setSourceTaxonKey in interface NameUsageExtension

equals

public boolean equals(Object o)

Overrides:

equals in class Object

hashCode

public int hashCode()

Overrides:

hashCode in class Object

toString

public String toString()

Overrides:

toString in class Object