Index (Darwin Core Archive IO Library 3.0.1-SNAPSHOT Test API)

A B C D E F G H I L M N O P R S T U V W X
All Classes and Interfaces|All Packages

A

AcefTermTest - Class in org.gbif.dwc.terms
AcefTermTest() - Constructor for class org.gbif.dwc.terms.AcefTermTest
AcTermTest - Class in org.gbif.dwc.terms
AcTermTest() - Constructor for class org.gbif.dwc.terms.AcTermTest
addSimpleTerm() - Method in class org.gbif.dwc.terms.TermFactoryTest
addUnknownSimpleTerm() - Method in class org.gbif.dwc.terms.TermFactoryTest
addUnknownTerm() - Method in class org.gbif.dwc.terms.TermFactoryTest
AnnotationUtilsTest - Class in org.gbif.utils: Unit test related tp AnnotationUtils
AnnotationUtilsTest() - Constructor for class org.gbif.utils.AnnotationUtilsTest
ArchiveFactoryTest - Class in org.gbif.dwca.io
ArchiveFactoryTest() - Constructor for class org.gbif.dwca.io.ArchiveFactoryTest
ArchiveFileTest - Class in org.gbif.dwc: Unit test related to ArchiveFile.
ArchiveFileTest() - Constructor for class org.gbif.dwc.ArchiveFileTest
ArchivePlaziTest - Class in org.gbif.dwc
ArchivePlaziTest() - Constructor for class org.gbif.dwc.ArchivePlaziTest
ArchiveTest - Class in org.gbif.dwc
ArchiveTest() - Constructor for class org.gbif.dwc.ArchiveTest
assertUnixSortOrder(File) - Static method in class org.gbif.utils.file.FileUtilsTest
assertUnixSortOrder(Iterator<String>) - Static method in class org.gbif.utils.file.FileUtilsTest

B

badTerm() - Method in class org.gbif.dwc.terms.TermFactoryTest
BigDecimalUtilsTest - Class in org.gbif.utils.number: Tests for BigDecimal utility class
BigDecimalUtilsTest() - Constructor for class org.gbif.utils.number.BigDecimalUtilsTest
BomSafeInputStreamWrapperTest - Class in org.gbif.utils.file
BomSafeInputStreamWrapperTest() - Constructor for class org.gbif.utils.file.BomSafeInputStreamWrapperTest

C

CharsetDetectionTest - Class in org.gbif.utils.file
CharsetDetectionTest() - Constructor for class org.gbif.utils.file.CharsetDetectionTest
ChronoTermTest - Class in org.gbif.dwc.terms
ChronoTermTest() - Constructor for class org.gbif.dwc.terms.ChronoTermTest
classpathFile(String) - Method in class org.gbif.utils.file.CompressionUtilTest
classTerms() - Method in class org.gbif.dwc.terms.AcTermTest
CleanUtilsTest - Class in org.gbif.dwc.record
CleanUtilsTest() - Constructor for class org.gbif.dwc.record.CleanUtilsTest
ComparatorPerformance - Class in org.gbif.utils.text
ComparatorPerformance() - Constructor for class org.gbif.utils.text.ComparatorPerformance
CompressionUtilTest - Class in org.gbif.utils.file
CompressionUtilTest() - Constructor for class org.gbif.utils.file.CompressionUtilTest
createTempDirectory() - Static method in class org.gbif.utils.file.CompressionUtilTest
CSVReaderFactoryTest - Class in org.gbif.utils.file.csv
CSVReaderFactoryTest() - Constructor for class org.gbif.utils.file.csv.CSVReaderFactoryTest
CSVReaderTest - Class in org.gbif.utils.file.csv
CSVReaderTest() - Constructor for class org.gbif.utils.file.csv.CSVReaderTest

D

DcElementTest - Class in org.gbif.dwc.terms
DcElementTest() - Constructor for class org.gbif.dwc.terms.DcElementTest
DcTermTest - Class in org.gbif.dwc.terms
DcTermTest() - Constructor for class org.gbif.dwc.terms.DcTermTest
demonstrateBigDecimalStripTrailingZerosEquality() - Method in class org.gbif.utils.number.BigDecimalUtilsTest: This test is simply to show why we are not using BigDecimal stripTrailingZeros function.
detectCsvAlwaysQuoted() - Method in class org.gbif.utils.file.csv.CSVReaderFactoryTest
detectCsvAlwaysQuoted() - Method in class org.gbif.utils.file.tabular.TabularFileMetadataExtractorTest
detectCsvOptionallyQuoted() - Method in class org.gbif.utils.file.csv.CSVReaderFactoryTest: As CSV files with rare optional quotes are hard to detect but cause problems we prefer to default to the " quotation in case comma seperated files are used.
detectCsvUnquoted() - Method in class org.gbif.utils.file.csv.CSVReaderFactoryTest: We dont want unquoted CSVs, See detectCsvOptionallyQuoted()
detectEncoding() - Method in class org.gbif.utils.file.tabular.TabularFileMetadataExtractorTest
detectPipe() - Method in class org.gbif.utils.file.csv.CSVReaderFactoryTest
detectPipe() - Method in class org.gbif.utils.file.tabular.TabularFileMetadataExtractorTest
detectSemicolon() - Method in class org.gbif.utils.file.csv.CSVReaderFactoryTest
detectSemicolon() - Method in class org.gbif.utils.file.tabular.TabularFileMetadataExtractorTest
detectTab() - Method in class org.gbif.utils.file.csv.CSVReaderFactoryTest
detectTab() - Method in class org.gbif.utils.file.tabular.TabularFileMetadataExtractorTest
detectTabQuoted() - Method in class org.gbif.utils.file.csv.CSVReaderFactoryTest
detectTabQuoted() - Method in class org.gbif.utils.file.tabular.TabularFileMetadataExtractorTest
DoubleVsBigDecimal - Class in org.gbif.utils.number: Set of tests to illustrate the issue with double and how some problems can be solved with BigDecimal.
DoubleVsBigDecimal() - Constructor for class org.gbif.utils.number.DoubleVsBigDecimal
DwcaStreamWriterTest - Class in org.gbif.dwc
DwcaStreamWriterTest() - Constructor for class org.gbif.dwc.DwcaStreamWriterTest
DwcaTermTest - Class in org.gbif.dwc.terms
DwcaTermTest() - Constructor for class org.gbif.dwc.terms.DwcaTermTest
DwcaWriterTest - Class in org.gbif.dwc
DwcaWriterTest() - Constructor for class org.gbif.dwc.DwcaWriterTest
DwcFilesTest - Class in org.gbif.dwc: Tests related to DwcFiles.
DwcFilesTest() - Constructor for class org.gbif.dwc.DwcFilesTest
DwcMetaFilesTest - Class in org.gbif.dwc.meta: Tests related to DwcMetaFiles.
DwcMetaFilesTest() - Constructor for class org.gbif.dwc.meta.DwcMetaFilesTest
DwcTermTest - Class in org.gbif.dwc.terms
DwcTermTest() - Constructor for class org.gbif.dwc.terms.DwcTermTest

E

EmailUtilsTest - Class in org.gbif.utils.text
EmailUtilsTest() - Constructor for class org.gbif.utils.text.EmailUtilsTest
ExecutorUtilsTest - Class in org.gbif.utils.concurrent
ExecutorUtilsTest() - Constructor for class org.gbif.utils.concurrent.ExecutorUtilsTest
ExifTermTest - Class in org.gbif.dwc.terms
ExifTermTest() - Constructor for class org.gbif.dwc.terms.ExifTermTest
ExtensionFactoryTest - Class in org.gbif.dwc.extensions
ExtensionFactoryTest() - Constructor for class org.gbif.dwc.extensions.ExtensionFactoryTest
ExtensionTest - Class in org.gbif.dwc.extensions: Unit tests related to Extension
ExtensionTest() - Constructor for class org.gbif.dwc.extensions.ExtensionTest

F

FileUtilsTest - Class in org.gbif.utils.file
FileUtilsTest() - Constructor for class org.gbif.utils.file.FileUtilsTest
folder - Variable in class org.gbif.dwc.InternalDwcFileFactoryTest

G

GadmTermTest - Class in org.gbif.dwc.terms
GadmTermTest() - Constructor for class org.gbif.dwc.terms.GadmTermTest
GbifDnaTermTest - Class in org.gbif.dwc.terms
GbifDnaTermTest() - Constructor for class org.gbif.dwc.terms.GbifDnaTermTest
GbifMiqeTermTest - Class in org.gbif.dwc.terms
GbifMiqeTermTest() - Constructor for class org.gbif.dwc.terms.GbifMiqeTermTest
GbifTermTest - Class in org.gbif.dwc.terms
GbifTermTest() - Constructor for class org.gbif.dwc.terms.GbifTermTest
GermplasmTermTest - Class in org.gbif.dwc.terms
GermplasmTermTest() - Constructor for class org.gbif.dwc.terms.GermplasmTermTest
GgbnTermTest - Class in org.gbif.dwc.terms
GgbnTermTest() - Constructor for class org.gbif.dwc.terms.GgbnTermTest

H

HashSetPerformance - Class in org.gbif.utils.collection
HashSetPerformance() - Constructor for class org.gbif.utils.collection.HashSetPerformance
humanReadableByteCountTest() - Method in class org.gbif.utils.file.FileUtilsTest

I

InternalDwcFileFactoryTest - Class in org.gbif.dwc: Tests related to InternalDwcFileFactory.
InternalDwcFileFactoryTest() - Constructor for class org.gbif.dwc.InternalDwcFileFactoryTest
IptcTermTest - Class in org.gbif.dwc.terms
IptcTermTest() - Constructor for class org.gbif.dwc.terms.IptcTermTest
IucnTermTest - Class in org.gbif.dwc.terms
IucnTermTest() - Constructor for class org.gbif.dwc.terms.IucnTermTest

L

LineComparatorTest - Class in org.gbif.utils.text
LineComparatorTest() - Constructor for class org.gbif.utils.text.LineComparatorTest

M

main(String...) - Static method in class org.gbif.dwc.ParallelOpeningTest
main(String[]) - Static method in class org.gbif.utils.collection.HashSetPerformance
MapUtilsTest - Class in org.gbif.utils.collection
MapUtilsTest() - Constructor for class org.gbif.utils.collection.MapUtilsTest
MetaDescriptorTest - Class in org.gbif.dwc: Integration tests related to the MetaDescriptor operations.
MetaDescriptorTest() - Constructor for class org.gbif.dwc.MetaDescriptorTest
MetaDescriptorTest.SAXExtractTerms - Class in org.gbif.dwc
MixsTermTest - Class in org.gbif.dwc.terms
MixsTermTest() - Constructor for class org.gbif.dwc.terms.MixsTermTest

N

newArrayList(Integer...) - Method in class org.gbif.utils.ObjectUtilsTest

O

ObisTermTest - Class in org.gbif.dwc.terms
ObisTermTest() - Constructor for class org.gbif.dwc.terms.ObisTermTest
ObjectUtilsTest - Class in org.gbif.utils
ObjectUtilsTest() - Constructor for class org.gbif.utils.ObjectUtilsTest
org.gbif.dwc - package org.gbif.dwc
org.gbif.dwc.extensions - package org.gbif.dwc.extensions
org.gbif.dwc.io - package org.gbif.dwc.io
org.gbif.dwc.meta - package org.gbif.dwc.meta
org.gbif.dwc.record - package org.gbif.dwc.record
org.gbif.dwc.terms - package org.gbif.dwc.terms
org.gbif.dwc.terms.jackson - package org.gbif.dwc.terms.jackson
org.gbif.dwca.io - package org.gbif.dwca.io
org.gbif.utils - package org.gbif.utils
org.gbif.utils.collection - package org.gbif.utils.collection
org.gbif.utils.concurrent - package org.gbif.utils.concurrent
org.gbif.utils.file - package org.gbif.utils.file
org.gbif.utils.file.csv - package org.gbif.utils.file.csv
org.gbif.utils.file.tabular - package org.gbif.utils.file.tabular
org.gbif.utils.number - package org.gbif.utils.number
org.gbif.utils.rs - package org.gbif.utils.rs
org.gbif.utils.text - package org.gbif.utils.text

P

ParallelOpeningTest - Class in org.gbif.dwc: This test checks we don't get a race condition between two processes opening the same DWC-A at the same time.
ParallelOpeningTest() - Constructor for class org.gbif.dwc.ParallelOpeningTest
PhotoshopTermTest - Class in org.gbif.dwc.terms
PhotoshopTermTest() - Constructor for class org.gbif.dwc.terms.PhotoshopTermTest
PlaziTermTest - Class in org.gbif.dwc.terms
PlaziTermTest() - Constructor for class org.gbif.dwc.terms.PlaziTermTest
PropertiesUtilTest - Class in org.gbif.utils.file
PropertiesUtilTest() - Constructor for class org.gbif.utils.file.PropertiesUtilTest

R

RecordImplTest - Class in org.gbif.dwc.record
RecordImplTest() - Constructor for class org.gbif.dwc.record.RecordImplTest
removedGbifTerms() - Method in class org.gbif.dwc.terms.TermFactoryTest
ResourcesUtilTest - Class in org.gbif.utils.file
ResourcesUtilTest() - Constructor for class org.gbif.utils.file.ResourcesUtilTest
RsGbifOrgTest - Class in org.gbif.utils.rs
RsGbifOrgTest() - Constructor for class org.gbif.utils.rs.RsGbifOrgTest

S

SAXExtractTerms(List<String>) - Constructor for class org.gbif.dwc.MetaDescriptorTest.SAXExtractTerms
StarIteratorTest - Class in org.gbif.dwc
StarIteratorTest() - Constructor for class org.gbif.dwc.StarIteratorTest
startElement(String, String, String, Attributes) - Method in class org.gbif.dwc.MetaDescriptorTest.SAXExtractTerms
stopEmptyExec() - Method in class org.gbif.utils.concurrent.ExecutorUtilsTest
stopExecWithJobs() - Method in class org.gbif.utils.concurrent.ExecutorUtilsTest
StringUtilsTest - Class in org.gbif.utils.text
StringUtilsTest() - Constructor for class org.gbif.utils.text.StringUtilsTest
StrTokenizerPerformance - Class in org.gbif.dwc.io
StrTokenizerPerformance() - Constructor for class org.gbif.dwc.io.StrTokenizerPerformance
StrTokenizerTest - Class in org.gbif.dwc.io
StrTokenizerTest() - Constructor for class org.gbif.dwc.io.StrTokenizerTest

T

TabularDataFileReaderTest - Class in org.gbif.utils.file.tabular: Unit tests for TabularDataFileReader.
TabularDataFileReaderTest() - Constructor for class org.gbif.utils.file.tabular.TabularDataFileReaderTest
TabularFileMetadataExtractorTest - Class in org.gbif.utils.file.tabular: Unit tests related to TabularFileMetadataExtractor
TabularFileMetadataExtractorTest() - Constructor for class org.gbif.utils.file.tabular.TabularFileMetadataExtractorTest
TabularFileNormalizerTest - Class in org.gbif.utils.file.tabular: Unit test related to TabularFileNormalizer
TabularFileNormalizerTest() - Constructor for class org.gbif.utils.file.tabular.TabularFileNormalizerTest
TERM_FACTORY - Static variable in class org.gbif.dwc.MetaDescriptorTest
TermBaseTest<T extends org.gbif.dwc.terms.Term> - Class in org.gbif.dwc.terms: Generic tests for all Term implementing classes.
TermBaseTest(Class<T>) - Constructor for class org.gbif.dwc.terms.TermBaseTest
TermBaseTest(Class<T>, String[], boolean) - Constructor for class org.gbif.dwc.terms.TermBaseTest
TermComparatorTest - Class in org.gbif.dwc.terms
TermComparatorTest() - Constructor for class org.gbif.dwc.terms.TermComparatorTest
TermDeserializerTest - Class in org.gbif.dwc.terms.jackson
TermDeserializerTest() - Constructor for class org.gbif.dwc.terms.jackson.TermDeserializerTest
TermFactoryTest - Class in org.gbif.dwc.terms
TermFactoryTest() - Constructor for class org.gbif.dwc.terms.TermFactoryTest
TermsTest - Class in org.gbif.dwc.terms: Unit tests for Terms
TermsTest() - Constructor for class org.gbif.dwc.terms.TermsTest
test(boolean, Set) - Static method in class org.gbif.utils.collection.HashSetPerformance
testAddingCoreIdTermTwice() - Method in class org.gbif.dwc.DwcaWriterTest
testAdditionAssociativity() - Method in class org.gbif.utils.number.DoubleVsBigDecimal: Example from https://en.wikipedia.org/wiki/Floating_point#Accuracy_problems Simply demonstrates that (a + b) + c is not necessarily equal to a + (b + c) using double.
testAuthorityUrl() - Method in class org.gbif.utils.rs.RsGbifOrgTest
testBigDecimalConstructor() - Method in class org.gbif.utils.number.BigDecimalUtilsTest: This test is simply to illustrate why we use the BigDecimal(String) constructor.
testBigDecimalConstructorNull() - Method in class org.gbif.utils.number.BigDecimalUtilsTest
testBomSafeInputStreamWrapper() - Method in class org.gbif.utils.file.BomSafeInputStreamWrapperTest
testBooleanProperties() - Method in class org.gbif.utils.file.PropertiesUtilTest
testBuild() - Method in class org.gbif.dwc.terms.UnknownTermTest
testBuildError() - Method in class org.gbif.dwc.terms.UnknownTermTest
testBuildError2() - Method in class org.gbif.dwc.terms.UnknownTermTest
testBuildReaderFile() - Method in class org.gbif.dwc.ArchivePlaziTest
testCharVsStringPerformance() - Method in class org.gbif.dwc.io.StrTokenizerPerformance
testClassTerm() - Method in class org.gbif.dwc.terms.DwcTermTest
testClassTerms() - Method in class org.gbif.dwc.terms.AcefTermTest
testClassTerms() - Method in class org.gbif.dwc.terms.ChronoTermTest
testClassTerms() - Method in class org.gbif.dwc.terms.DwcaTermTest
testClassTerms() - Method in class org.gbif.dwc.terms.ExifTermTest
testClassTerms() - Method in class org.gbif.dwc.terms.GadmTermTest
testClassTerms() - Method in class org.gbif.dwc.terms.GbifDnaTermTest
testClassTerms() - Method in class org.gbif.dwc.terms.GbifMiqeTermTest
testClassTerms() - Method in class org.gbif.dwc.terms.GermplasmTermTest
testClassTerms() - Method in class org.gbif.dwc.terms.GgbnTermTest
testClassTerms() - Method in class org.gbif.dwc.terms.IptcTermTest
testClassTerms() - Method in class org.gbif.dwc.terms.IucnTermTest
testClassTerms() - Method in class org.gbif.dwc.terms.ObisTermTest
testClassTerms() - Method in class org.gbif.dwc.terms.PhotoshopTermTest
testClassTerms() - Method in class org.gbif.dwc.terms.PlaziTermTest
testClassTerms() - Method in class org.gbif.dwc.terms.Wgs84GeoPositioningTermTest
testClean() - Method in class org.gbif.dwc.record.CleanUtilsTest
testCleanFalse() - Method in class org.gbif.dwc.record.CleanUtilsTest
testCoalesce() - Method in class org.gbif.utils.ObjectUtilsTest
testCoalesce1() - Method in class org.gbif.utils.ObjectUtilsTest
testCompare() - Method in class org.gbif.dwc.terms.TermComparatorTest
testCompareTo() - Method in class org.gbif.dwc.extensions.ExtensionTest
testCompareTo() - Method in class org.gbif.dwc.extensions.VocabularyConceptTest
testCompleteness() - Method in class org.gbif.dwc.terms.TermFactoryTest
testComputeDelimiterDistinctFrequency() - Method in class org.gbif.utils.file.tabular.TabularFileMetadataExtractorTest
testComputeDelimiterFrequencySums() - Method in class org.gbif.utils.file.tabular.TabularFileMetadataExtractorTest
testComputeDelimiterHighestFrequencyPerLine() - Method in class org.gbif.utils.file.tabular.TabularFileMetadataExtractorTest
testConstituents() - Method in class org.gbif.dwc.ArchiveTest
testCopyResources() - Method in class org.gbif.utils.file.ResourcesUtilTest
testCopyResourcesThrowing() - Method in class org.gbif.utils.file.ResourcesUtilTest
testCoreRecords() - Method in class org.gbif.dwca.io.ArchiveFactoryTest
testCP1252Encoding() - Method in class org.gbif.utils.file.CharsetDetectionTest
testCsv() - Method in class org.gbif.dwca.io.ArchiveFactoryTest: Test dwca-reader bug 83
testCsvAlwaysQuotes() - Method in class org.gbif.utils.file.csv.CSVReaderTest
testCsvAlwaysQuotes() - Method in class org.gbif.utils.file.tabular.TabularDataFileReaderTest: Test a CSV with all cells quoted.
testCsvJsonEscapedQuotes() - Method in class org.gbif.dwca.io.ArchiveFactoryTest: Test extracting a CSV file containing embedded JSON, which itself contains escaped quotes.
testCsvJsonEscapedQuotes() - Method in class org.gbif.utils.file.csv.CSVReaderTest: Test extracting a CSV file containing embedded JSON, which itself contains escaped quotes.
testCsvJsonEscapedQuotes() - Method in class org.gbif.utils.file.tabular.TabularDataFileReaderTest: Test extracting a CSV file containing embedded JSON, which itself contains escaped quotes.
testCsvMultiline() - Method in class org.gbif.utils.file.tabular.TabularDataFileReaderTest: Test a CSV file that includes a newline character (\n) inside a properly quoted cell.
testCsvOptionalQuotes() - Method in class org.gbif.dwca.io.ArchiveFactoryTest: Testing CSV with optional quotes
testCsvOptionalQuotes() - Method in class org.gbif.utils.file.csv.CSVReaderTest: csv file with optional quotes generated by excel.
testCsvOptionalQuotes() - Method in class org.gbif.utils.file.tabular.TabularDataFileReaderTest
testCsvQuoted() - Method in class org.gbif.dwc.io.StrTokenizerTest
testCsvQuotedDelimiter() - Method in class org.gbif.utils.file.csv.CSVReaderTest
testCsvUnquoted() - Method in class org.gbif.dwc.io.StrTokenizerTest
testCsvWithComment() - Method in class org.gbif.utils.file.tabular.TabularDataFileReaderTest
testDecodeUtf8Garbage() - Method in class org.gbif.utils.text.StringUtilsTest
testDecompress() - Method in class org.gbif.utils.file.CompressionUtilTest
testDecompressZippedFolderWithNoSubdirectories() - Method in class org.gbif.utils.file.CompressionUtilTest
testDecompressZippedFolderWithNoSubdirectoriesx() - Method in class org.gbif.utils.file.CompressionUtilTest: Check we can unpack ZIP64 archives.
testDefaultValue() - Method in class org.gbif.dwc.record.RecordImplTest
testDefaultValues() - Method in class org.gbif.dwc.ArchiveFileTest
testDeleteRecursive() - Method in class org.gbif.utils.file.FileUtilsTest: tests deleting directory recursively.
testDeleteWhitespace() - Method in class org.gbif.utils.text.StringUtilsTest
testDeprecated() - Method in class org.gbif.dwc.terms.GbifTermTest
testDetermineRecordIdentifier() - Method in class org.gbif.dwc.InternalDwcFileFactoryTest
testDetermineRowType() - Method in class org.gbif.dwc.InternalDwcFileFactoryTest
testDictionaryUrl() - Method in class org.gbif.utils.rs.RsGbifOrgTest
testDiscoverMetadataFile() - Method in class org.gbif.dwc.meta.DwcMetaFilesTest
testDoubleApproximation() - Method in class org.gbif.utils.number.DoubleVsBigDecimal: Demonstrates the effect of Double approximations on equality.
testDwcRecordIterator() - Method in class org.gbif.dwc.DwcFilesTest
testEmailPatterns() - Method in class org.gbif.utils.text.EmailUtilsTest
testEmptyArchiveFile() - Method in class org.gbif.dwc.ArchiveFileTest
testEmptyProperties() - Method in class org.gbif.utils.file.PropertiesUtilTest
testEncodingDetection() - Method in class org.gbif.utils.file.CharsetDetectionTest
testEncodingDetectionKyles() - Method in class org.gbif.utils.file.CharsetDetectionTest
testEquals() - Method in class org.gbif.dwc.terms.UnknownTermTest
testEqualsCompareToContract() - Method in class org.gbif.utils.text.LineComparatorTest: Test for respecting equals and compareTo to ensure comparator respects java contracts.
testEscapedQuotes() - Method in class org.gbif.utils.file.tabular.TabularDataFileReaderTest: Ensure if we can escape a quote character with a backslash
testExceptionNoPrefix() - Method in class org.gbif.utils.file.PropertiesUtilTest
testExceptionNoProperties() - Method in class org.gbif.utils.file.PropertiesUtilTest
testExtensionFactory() - Method in class org.gbif.dwc.extensions.ExtensionFactoryTest
testExtensionNPE() - Method in class org.gbif.dwca.io.ArchiveFactoryTest: The pensoft archive http://pensoft.net/dwc/bdj/checklist_980.zip contains empty extension files which caused NPE in the dwca reader.
testExtractTabularMetadata() - Method in class org.gbif.utils.file.tabular.TabularFileMetadataExtractorTest
testFallbackToDefaultsArchives() - Method in class org.gbif.dwca.io.ArchiveFactoryTest: Basic validation of archives, where we rely on falling back to defaults from the DWC-A metadata schema.
testFilesClosedCorrectly() - Method in class org.gbif.utils.file.CompressionUtilTest: Check that files are closed after use.
testFileSorting() - Method in class org.gbif.utils.text.ComparatorPerformance: Comparing performance for various file soring methods.
TestFileUtils - Class in org.gbif.utils.file: Testing the data layout
TestFileUtils() - Constructor for class org.gbif.utils.file.TestFileUtils
testFilterProperties() - Method in class org.gbif.utils.file.PropertiesUtilTest
testFindPrefixedTerms() - Method in class org.gbif.dwc.terms.TermBaseTest
testFindQualifiedTerm() - Method in class org.gbif.dwc.terms.TermBaseTest
testFindSimpleTerm() - Method in class org.gbif.dwc.terms.TermBaseTest: Test that iterates over all term values and uses the simple name alone as input to the factory and then verifies the Term returned is the same as the original one.
testFindTerm() - Method in class org.gbif.dwc.terms.TermFactoryTest
testFindTermWithDcPrefix() - Method in class org.gbif.dwc.terms.DcElementTest: There are 15 terms in DcElement that share the same name with DcTerm elements.
testFindTermWithDctermsPrefix() - Method in class org.gbif.dwc.terms.DcTermTest: There are 15 terms in DcElement that share the same name with DcTerm elements.
testFindTermWithDctPrefix() - Method in class org.gbif.dwc.terms.DcTermTest: There are 15 terms in DcElement that share the same name with DcTerm elements.
testFindTermWithNoNamespaceAndNoPrefix() - Method in class org.gbif.dwc.terms.DcTermTest: There are 15 terms in DcElement that share the same name with DcTerm elements.
testFindTermWithValidNamespace() - Method in class org.gbif.dwc.terms.DcElementTest: A lookup for "http://purl.org/dc/elements/1.1/rights" shouldn't return "http://purl.org/dc/terms/rights"
testFindTermWithValidNamespace() - Method in class org.gbif.dwc.terms.DcTermTest: A lookup for "http://purl.org/dc/terms/rights" shouldn't return "http://purl.org/dc/elements/1.1/rights".
testFoldToAscii() - Method in class org.gbif.utils.text.StringUtilsTest
testFromCompressedTarGzip() - Method in class org.gbif.dwc.InternalDwcFileFactoryTest
testFromCompressedZip() - Method in class org.gbif.dwc.InternalDwcFileFactoryTest
testFromDouble() - Method in class org.gbif.utils.number.BigDecimalUtilsTest
testGetDelimiterWithHighestCount() - Method in class org.gbif.utils.file.tabular.TabularFileMetadataExtractorTest
testGetFullScientificName() - Method in class org.gbif.dwc.record.RecordImplTest
testGetHeader() - Method in class org.gbif.dwc.ArchiveFileTest
testGetQuoteCharWithHighestCount() - Method in class org.gbif.utils.file.tabular.TabularFileMetadataExtractorTest
testGetValueOfFirst() - Method in class org.gbif.dwc.terms.TermsTest
testGnubTab() - Method in class org.gbif.dwca.io.ArchiveFactoryTest: Test GNUB style dwca with a single tab delimited file that has a .tab suffix.
testGnubTabZip() - Method in class org.gbif.dwca.io.ArchiveFactoryTest: Test GNUB style dwca with a single tab delimited file that has a .tab suffix.
testGroupCoverage() - Method in class org.gbif.dwc.terms.DwcTermTest
testGroupCoverage() - Method in class org.gbif.dwc.terms.GbifTermTest
testGunzipNoTar() - Method in class org.gbif.utils.file.CompressionUtilTest
testGunzipWithTar() - Method in class org.gbif.utils.file.CompressionUtilTest
testHeaderRows() - Method in class org.gbif.utils.file.csv.CSVReaderTest: tests the csv reader with different number of header rows on the same file and compares the 4th line in the text file for each of them
testHeaderRows2() - Method in class org.gbif.utils.file.csv.CSVReaderTest: Test if skip header rows is working with larger settings.
testHeaders1() - Method in class org.gbif.dwc.DwcaWriterTest
testHeaders2() - Method in class org.gbif.dwc.DwcaWriterTest
testHeaders3() - Method in class org.gbif.dwc.DwcaWriterTest
testHeaderWriting() - Method in class org.gbif.dwc.DwcaWriterTest
testIdWithTermAssociated() - Method in class org.gbif.dwc.ArchiveFileTest
testIgnoreEmptyLines() - Method in class org.gbif.utils.file.csv.CSVReaderTest
testIgnoreEmptyLines() - Method in class org.gbif.utils.file.tabular.TabularDataFileReaderTest
testIncrease() - Method in class org.gbif.utils.text.StringUtilsTest
testInvalidArchives() - Method in class org.gbif.dwc.DwcFilesTest: Basic validation of archives, that the declared files exist and have basic, valid structure.
testInvalidArchives() - Method in class org.gbif.dwca.io.ArchiveFactoryTest: Basic validation of archives, that the declared files exist and have basic, valid structure.
testIsClass() - Method in class org.gbif.dwc.terms.DwcTermTest
testIsClass() - Method in class org.gbif.dwc.terms.GbifTermTest
testIsClass() - Method in class org.gbif.dwc.terms.MixsTermTest
testIsFieldDeprecated() - Method in class org.gbif.utils.AnnotationUtilsTest
testIssue2158() - Method in class org.gbif.dwca.io.ArchiveFactoryTest: Test IPT bug 2158
testIssue78() - Method in class org.gbif.dwca.io.ArchiveFactoryTest: Identifier not set properly when reading single csv file the csv file attached is a utf16 little endian encoded file.
testIsTermValueBlank() - Method in class org.gbif.dwc.terms.TermsTest
testIterator() - Method in class org.gbif.dwc.ArchiveFileTest
testIterator() - Method in class org.gbif.dwc.StarIteratorTest
testIteratorDwc() - Method in class org.gbif.dwc.ArchiveTest: Check we can handle the simplest of archives.
testKnownTermUniqueness() - Method in class org.gbif.dwc.terms.TermFactoryTest: GBIF code assumes a term coming from any of the Term enumerations mostly have unique simple names.
testLineComparatorCSV() - Method in class org.gbif.utils.text.LineComparatorTest
testLineComparatorPipe() - Method in class org.gbif.utils.text.LineComparatorTest
testLineComparatorTab() - Method in class org.gbif.utils.text.LineComparatorTest
testList() - Method in class org.gbif.utils.file.ResourcesUtilTest
testListByGroup() - Method in class org.gbif.dwc.terms.DwcTermTest: Test each group contains the expected number of terms, and contains no duplicates.
testListByGroup() - Method in class org.gbif.dwc.terms.GbifTermTest: Test each group contains the expected number of terms, and contains no duplicates.
testMap() - Method in class org.gbif.utils.collection.MapUtilsTest
testMap2() - Method in class org.gbif.utils.collection.MapUtilsTest
testMergeEmptyFiles() - Method in class org.gbif.utils.file.FileUtilsTest
testMergeSortedFiles() - Method in class org.gbif.utils.file.FileUtilsTest
testMergeSortedFilesSpeed() - Method in class org.gbif.utils.file.FileUtilsTest
testMetaDescriptorReading() - Method in class org.gbif.dwc.MetaDescriptorTest: Test the reading of a static meta.xml file.
testMetaHandlerUtf16le() - Method in class org.gbif.dwca.io.ArchiveFactoryTest
testMixsTerm() - Method in class org.gbif.dwc.terms.MixsTermTest
testMultifile() - Method in class org.gbif.dwc.ArchiveTest: Check we can handle an archive file with multiple |SV files in the core and extension.
testMultifileMultilineHeader() - Method in class org.gbif.dwc.ArchiveTest: Check we can handle an archive file with multiple files each with multiple header lines
testMultiFileSort() - Method in class org.gbif.utils.file.FileUtilsTest: Test sorting multiple fils into a single file.
testMultiFileSort2ndColumn() - Method in class org.gbif.utils.file.FileUtilsTest: Test sorting multiple files into a single file.
testMultilineHeader() - Method in class org.gbif.dwc.ArchiveTest: Check we can handle an archive file with multiple header lines
testMultithreadStart() - Method in class org.gbif.dwc.terms.TermFactoryTest: Not a real test, just a way of running many concurrent TermFactory.instance() calls to verify thread safety.
testNames() - Method in class org.gbif.dwc.terms.DcElementTest
testNames() - Method in class org.gbif.dwc.terms.DcTermTest
testNames() - Method in class org.gbif.dwc.terms.TermBaseTest
testNamespace() - Method in class org.gbif.dwc.terms.UnknownTermTest
testNonExistingFileFromCompressed() - Method in class org.gbif.dwc.InternalDwcFileFactoryTest
testNonExistingFileFromLocation() - Method in class org.gbif.dwc.InternalDwcFileFactoryTest
testNormalizeAndSort() - Method in class org.gbif.dwc.DwcFilesTest
testNormalizeIfRequired() - Method in class org.gbif.dwc.DwcFilesTest
testNullCoreID() - Method in class org.gbif.dwca.io.ArchiveFactoryTest: Ensure that extensions are just skipped for archives that do not have the core id in the mapped extension.
testNumberOfGroups() - Method in class org.gbif.dwc.terms.DwcTermTest
testNumberOfGroups() - Method in class org.gbif.dwc.terms.GbifTermTest
testOcc() - Method in class org.gbif.dwc.terms.jackson.TermDeserializerTest
testOneTenthAdditions() - Method in class org.gbif.utils.number.DoubleVsBigDecimal: Demonstrates that the sum of 1/10 (10 times) is not exactly equals to 1d using double.
testOpenArchive() - Method in class org.gbif.dwca.io.ArchiveFactoryTest
testOpenArchiveForEventCore() - Method in class org.gbif.dwca.io.ArchiveFactoryTest: Test opening a single data file with both eventID column, meaning it has dwc:Event rowType.
testOpenArchiveForGenericCore() - Method in class org.gbif.dwca.io.ArchiveFactoryTest: Test opening a single data file with a generic ID column and an eventID column meaning the Archive's ID-term gets set to (DwcTerm.eventID and its rowType gets set to DwcTerm.Event.
testOpenSmallArchiveWithEmptyLines() - Method in class org.gbif.dwca.io.ArchiveFactoryTest
testParallelOpening() - Method in class org.gbif.dwc.ParallelOpeningTest: Check we don't get a race condition when opening an archive which needs sorting.
testPipes() - Method in class org.gbif.dwc.io.StrTokenizerTest
testPrefixedName() - Method in class org.gbif.dwc.terms.UnknownTermTest
testQualifiedName() - Method in class org.gbif.dwc.terms.UnknownTermTest
testQuotedHeaders() - Method in class org.gbif.dwca.io.ArchiveFactoryTest: Test bug 77.
testRandomString() - Method in class org.gbif.utils.text.StringUtilsTest
testRemoveProperties() - Method in class org.gbif.utils.file.PropertiesUtilTest
testReplaceNull() - Method in class org.gbif.dwc.record.RecordImplTest: Test record implementations value method and make sure literal nulls are replaced if requested.
testRoundingUsingFormat() - Method in class org.gbif.utils.number.DoubleVsBigDecimal: Demonstrates the possible issue with the default rounding mode of NumberFormat (RoundingMode.HALF_EVEN).
testRoundtrip() - Method in class org.gbif.dwc.DwcaWriterTest
testRoundtrip() - Method in class org.gbif.dwc.MetaDescriptorTest
testRoundtripQuotes() - Method in class org.gbif.dwc.MetaDescriptorTest
testRowTypeEquivalence() - Method in class org.gbif.dwc.ArchiveFileTest
testSaxParser() - Method in class org.gbif.utils.file.BomSafeInputStreamWrapperTest: The Java SAX Parser is known to have problems with UTF8 file that contain a proper BOM markup: http://bugs.java.com/bugdatabase/view_bug.do?bug_id=4508058 https://de.wikipedia.org/wiki/Byte_Order_Mark Make sure the SAX Parser can handle any valid UTF files by using a BomSafeInputStreamWrapper stream.
testSet() - Method in class org.gbif.dwc.terms.UnknownTermTest
testSimpleDWCA() - Method in class org.gbif.dwca.io.ArchiveFactoryTest: Test reading a single-file Simple Darwin Core Archive.
testSimpleName() - Method in class org.gbif.dwc.terms.UnknownTermTest
testSingleLineWithSeparatorAsValue() - Method in class org.gbif.utils.file.tabular.TabularFileMetadataExtractorTest
testSort() - Method in class org.gbif.utils.file.FileUtilsTest: Test using GNU sort (if available on this platform).
testSortingHeaderlessFile() - Method in class org.gbif.utils.file.FileUtilsTest
testSortingMac() - Method in class org.gbif.utils.file.FileUtilsTest: tests sorting mac line endings \r which don't work with unix sort
testSortingUnevenLengths() - Method in class org.gbif.utils.file.FileUtilsTest: Tests sorting by a column with uneven length strings as the sort column.
testSortingUnicodeFile() - Method in class org.gbif.utils.file.FileUtilsTest: Sorting strings containing characters which are surrogate pairs, meaning Unicode characters beyond U+FFFF, will give different results between GNU Sort and a Java String comparator.
testSortingUnix() - Method in class org.gbif.utils.file.FileUtilsTest: tests sorting unix line endings \n which work with unix sort
testSortingWindows() - Method in class org.gbif.utils.file.FileUtilsTest: tests sorting windows line endings \r\n which work with unix sort
testSortingWithHeaders() - Method in class org.gbif.utils.file.FileUtilsTest
testSortingWithNonFirstIdColumn() - Method in class org.gbif.utils.file.FileUtilsTest
testSortingWithQuotedDelimiters() - Method in class org.gbif.utils.file.FileUtilsTest: If only columns containing delimiters are quoted in CSV, we can't use GNU sort.
testSortInJava() - Method in class org.gbif.utils.file.FileUtilsTest: Test that ensures the chunk file is deleted at the end of sortInJava method.
testSourceRepo() - Method in class org.gbif.utils.file.TestFileUtils
testStarIteratorExtRecords() - Method in class org.gbif.dwca.io.ArchiveFactoryTest: Test extension sorting verifying that all core records do have the right number of extension records attached when using the star record iterator.
testStarRecordIterator() - Method in class org.gbif.dwc.DwcFilesTest
testSubsetProperties() - Method in class org.gbif.utils.file.PropertiesUtilTest
testSynonymUrl() - Method in class org.gbif.utils.rs.RsGbifOrgTest
testTab() - Method in class org.gbif.dwca.io.ArchiveFactoryTest
testTab() - Method in class org.gbif.utils.file.csv.CSVReaderTest: Testing classic non quoted tab files with escaped \t tabs.
testTab() - Method in class org.gbif.utils.file.tabular.TabularDataFileReaderTest: Testing classic non quoted tab files with escaped \t tabs.
testTabEol() - Method in class org.gbif.dwca.io.ArchiveFactoryTest
testTabQuoted() - Method in class org.gbif.dwc.io.StrTokenizerTest
testTabularFileNormalizer() - Method in class org.gbif.utils.file.tabular.TabularFileNormalizerTest
testTabUnquoted() - Method in class org.gbif.dwc.io.StrTokenizerTest
testTerm() - Method in class org.gbif.dwc.terms.GbifTermTest
testTermEquality() - Method in class org.gbif.dwc.terms.DcElementTest: Test that iterates over all DcElement values and uses the qualified name alone as input to the factory and then verifies the Term returned is the same as the original one.
testTermEquality() - Method in class org.gbif.dwc.terms.DcTermTest: Test that iterates over all DcTerm values and uses the simple name alone as input to the factory and then verifies the Term returned is the same as the original one.
testTermMap() - Method in class org.gbif.dwc.terms.jackson.TermDeserializerTest
testTermSerde() - Method in class org.gbif.dwc.terms.jackson.TermDeserializerTest
testThenJoin() - Method in class org.gbif.utils.text.StringUtilsTest
testTrim() - Method in class org.gbif.utils.text.StringUtilsTest
testTsvBackslashes() - Method in class org.gbif.utils.file.tabular.TabularDataFileReaderTest: TSV cannot encode tabs or newlines, so there is no escape character.
testUnableToDecompress() - Method in class org.gbif.utils.file.CompressionUtilTest
testUnzipFolderDoNotKeepSubdirectoriesOrHiddenFiles() - Method in class org.gbif.utils.file.CompressionUtilTest: Test unzipping a folder, while NOT preserving subdirectories.
testUnzipFolderKeepSubdirectoriesButNoHiddenDirectories() - Method in class org.gbif.utils.file.CompressionUtilTest: Test unzipping a folder, while preserving subdirectories, but making sure the .svn directories and their subfiles and subdirectories are not extracted.
testUnzipFolderKeepSubdirectoriesButNoHiddenFile() - Method in class org.gbif.utils.file.CompressionUtilTest: Test unzipping a folder, while preserving subdirectories.
testUrl() - Method in class org.gbif.utils.rs.RsGbifOrgTest
testUsageExample() - Method in class org.gbif.dwc.UsageExampleTest
testUTF16Stream() - Method in class org.gbif.utils.file.BomSafeInputStreamWrapperTest
testVariousComparators() - Method in class org.gbif.utils.text.ComparatorPerformance
testWriteMetadata() - Method in class org.gbif.dwc.DwcaWriterTest
testWriterUsingCoreIdTerm() - Method in class org.gbif.dwc.DwcaWriterTest
testWriterUsingDefaultValues() - Method in class org.gbif.dwc.DwcaWriterTest: Test the writing of an archive that includes some default values in the core and in one extension.
testWrongEscapedQuotes1() - Method in class org.gbif.utils.file.tabular.TabularDataFileReaderTest
testWrongEscapedQuotes2() - Method in class org.gbif.utils.file.tabular.TabularDataFileReaderTest
testXml() - Method in class org.gbif.dwc.MetaDescriptorTest
testZipFolder() - Method in class org.gbif.utils.file.CompressionUtilTest

U

UnknownTermTest - Class in org.gbif.dwc.terms
UnknownTermTest() - Constructor for class org.gbif.dwc.terms.UnknownTermTest
UsageExampleTest - Class in org.gbif.dwc
UsageExampleTest() - Constructor for class org.gbif.dwc.UsageExampleTest

V

VocabularyConceptTest - Class in org.gbif.dwc.extensions: Unit tests related to VocabularyConcept
VocabularyConceptTest() - Constructor for class org.gbif.dwc.extensions.VocabularyConceptTest

W

Wgs84GeoPositioningTermTest - Class in org.gbif.dwc.terms
Wgs84GeoPositioningTermTest() - Constructor for class org.gbif.dwc.terms.Wgs84GeoPositioningTermTest
write() - Method in class org.gbif.dwc.DwcaStreamWriterTest
writeEmpty() - Method in class org.gbif.dwc.DwcaStreamWriterTest

X

XmpRightsTermTest - Class in org.gbif.dwc.terms
XmpRightsTermTest() - Constructor for class org.gbif.dwc.terms.XmpRightsTermTest
XmpTermTest - Class in org.gbif.dwc.terms
XmpTermTest() - Constructor for class org.gbif.dwc.terms.XmpTermTest

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